RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL40A	YIL148W	YAR064W	P39563	99 aa		0.97	□□□□□ -2.25
RPL40A	YIL148W	YEL014C	P39999	101 aa		0.97	□□□□□ -2.25
RPL40A	YIL148W	DCV1	P43595	202 aa		0.97	□□□□□ -2.25
RPL40A	YIL148W	YGR042W	P53227	271 aa		0.97	□□□□□ -2.25
RPL40A	YIL148W	RCF2	P53721	224 aa		0.97	□□□□□ -2.25
RPL40A	YIL148W	AVO2	Q04749	426 aa		0.97	□□□□□ -2.25
RPL40A	YIL148W	NMA1	Q06178	401 aa	Known RBP	0.97	□□□□□ -2.25
RPL40A	YIL148W	FCY1	Q12178	158 aa		0.97	□□□□□ -2.25
RPL40A	YIL148W	ATP14	Q12349	124 aa		0.97	□□□□□ -2.25
RPL40A	YIL148W	YOR1	P53049	1477 aa		0.97	□□□□□ -2.25
RPL40A	YIL148W	SHB17	P36136	271 aa	Known RBP	0.96	□□□□□ -2.26
RPL40A	YIL148W	YKR070W	P36151	352 aa	Known RBP	0.96	□□□□□ -2.26
RPL40A	YIL148W	GIM4	P40005	111 aa	Known RBP	0.96	□□□□□ -2.26
RPL40A	YIL148W	YER181C	P40097	107 aa		0.96	□□□□□ -2.26
RPL40A	YIL148W	YGL230C	P53074	147 aa		0.96	□□□□□ -2.26
RPL40A	YIL148W	FMN1	Q03778	218 aa		0.96	□□□□□ -2.26
RPL40A	YIL148W	YDL241W	Q07738	123 aa		0.96	□□□□□ -2.26
RPL40A	YIL148W	YPR203W	Q08994	102 aa		0.96	□□□□□ -2.26
RPL40A	YIL148W	KIN28	P06242	306 aa		0.95	□□□□□ -2.26
RPL40A	YIL148W	HYP2	P23301	157 aa	Known RBP	0.95	□□□□□ -2.26
RPL40A	YIL148W	SPT14	P32363	452 aa		0.95	□□□□□ -2.26
RPL40A	YIL148W	RBL2	P48606	106 aa	Known RBP	0.95	□□□□□ -2.26
RPL40A	YIL148W	VMA10	P48836	114 aa	Known RBP	0.95	□□□□□ -2.26
RPL40A	YIL148W	YDC1	Q02896	317 aa		0.95	□□□□□ -2.26
RPL40A	YIL148W	CSN9	Q03981	162 aa		0.95	□□□□□ -2.26
RPL40A	YIL148W	PHO13	P19881	312 aa		0.94	□□□□□ -2.26
RPL40A	YIL148W	MRPL24	P36525	258 aa	Predicted RBP	0.94	□□□□□ -2.26
RPL40A	YIL148W	RFU1	Q08003	200 aa		0.94	□□□□□ -2.26
RPL40A	YIL148W	SLH1	P53327	1967 aa	Known RBP	0.94	□□□□□ -2.26
RPL40A	YIL148W	PHB1	P40961	287 aa		0.93	□□□□□ -2.26
RPL40A	YIL148W	GPI2	P46961	280 aa		0.93	□□□□□ -2.26
RPL40A	YIL148W	YGL204C	P53089	101 aa		0.93	□□□□□ -2.26
RPL40A	YIL148W	YDR366C	P87287	132 aa		0.93	□□□□□ -2.26
RPL40A	YIL148W	EST3	Q03096	181 aa		0.93	□□□□□ -2.26
RPL40A	YIL148W	NKP2	Q06162	153 aa		0.93	□□□□□ -2.26
RPL40A	YIL148W	IRC19	Q07843	230 aa		0.93	□□□□□ -2.26
RPL40A	YIL148W	UBR1	P19812	1950 aa		0.92	□□□□□ -2.26
RPL40A	YIL148W	FMP49	A0A023PZB3	126 aa		0.92	□□□□□ -2.26
RPL40A	YIL148W	NHP6A	P11632	93 aa	Known RBP	0.92	□□□□□ -2.26
RPL40A	YIL148W	MRS4	P23500	304 aa		0.92	□□□□□ -2.26
RPL40A	YIL148W	SUA7	P29055	345 aa	Predicted RBP	0.92	□□□□□ -2.26
RPL40A	YIL148W	HSP150	P32478	413 aa		0.92	□□□□□ -2.26
RPL40A	YIL148W	SRL3	P36167	246 aa		0.92	□□□□□ -2.26
RPL40A	YIL148W	IPI1	P38803	334 aa	Predicted RBP	0.92	□□□□□ -2.26
RPL40A	YIL148W	YJL218W	P40892	196 aa	Known RBP	0.92	□□□□□ -2.26
RPL40A	YIL148W	RPL37B	P51402	88 aa	Known RBP	0.92	□□□□□ -2.26
RPL40A	YIL148W	DYN2	Q02647	92 aa		0.92	□□□□□ -2.26
RPL40A	YIL148W	SDH7	Q04401	133 aa		0.92	□□□□□ -2.26
RPL40A	YIL148W	CNL1	Q06333	122 aa		0.92	□□□□□ -2.26
RPL40A	YIL148W	YPR153W	Q06537	140 aa		0.92	□□□□□ -2.26
RPL40A	YIL148W	HUT1	Q12520	339 aa		0.92	□□□□□ -2.26
RPL40A	YIL148W	WIP1	Q2V2P8	89 aa		0.92	□□□□□ -2.26
RPL40A	YIL148W	HSP12	P22943	109 aa	Known RBP	0.91	□□□□□ -2.26
RPL40A	YIL148W	YBR027C	P38220	110 aa		0.91	□□□□□ -2.26
RPL40A	YIL148W	CYC2	P38909	366 aa		0.91	□□□□□ -2.26
RPL40A	YIL148W	VMA7	P39111	118 aa		0.91	□□□□□ -2.26
RPL40A	YIL148W	SPG1	P50088	95 aa		0.91	□□□□□ -2.26
RPL40A	YIL148W	YGR017W	P53210	297 aa		0.91	□□□□□ -2.26
RPL40A	YIL148W	YGR039W	P53225	103 aa		0.91	□□□□□ -2.26
RPL40A	YIL148W	HHO1	P53551	258 aa		0.91	□□□□□ -2.26
RPL40A	YIL148W	APS2	Q00381	147 aa		0.91	□□□□□ -2.26
RPL40A	YIL148W	SPC24	Q04477	213 aa		0.91	□□□□□ -2.26
RPL40A	YIL148W	FCF2	Q12035	217 aa	Predicted RBP	0.91	□□□□□ -2.26
RPL40A	YIL148W	RAD50	P12753	1312 aa		0.9	□□□□□ -2.26
RPL40A	YIL148W	YOR304C-A	O14468	76 aa		0.9	□□□□□ -2.27
RPL40A	YIL148W	SRP21	P32342	167 aa		0.9	□□□□□ -2.27
RPL40A	YIL148W	MRP49	P32388	137 aa		0.9	□□□□□ -2.27
RPL40A	YIL148W	SUI1	P32911	108 aa	Known RBP	0.9	□□□□□ -2.27
RPL40A	YIL148W	IPT1	P38954	527 aa		0.9	□□□□□ -2.27
RPL40A	YIL148W	GLC8	P41818	229 aa		0.9	□□□□□ -2.27
RPL40A	YIL148W	YGR201C	P42936	225 aa		0.9	□□□□□ -2.27
RPL40A	YIL148W	COF1	Q03048	143 aa	Known RBP	0.9	□□□□□ -2.27
RPL40A	YIL148W	FRQ1	Q06389	190 aa		0.9	□□□□□ -2.27
RPL40A	YIL148W	RAF1	Q06891	181 aa		0.9	□□□□□ -2.27
RPL40A	YIL148W	YOR072W	Q08486	104 aa		0.9	□□□□□ -2.27
RPL40A	YIL148W	CCW12	Q12127	133 aa		0.9	□□□□□ -2.27
RPL40A	YIL148W	SLO1	Q3E784	85 aa		0.9	□□□□□ -2.27
RPL40A	YIL148W	CMC4	Q3E7A9	73 aa		0.9	□□□□□ -2.27
RPL40A	YIL148W	SCS22	Q6Q595	175 aa		0.9	□□□□□ -2.27
RPL40A	YIL148W	HFA1	P32874	2273 aa		0.9	□□□□□ -2.27
RPL40A	YIL148W	SKI3	P17883	1432 aa	Known RBP	0.89	□□□□□ -2.27
RPL40A	YIL148W	ECM5	Q03214	1411 aa		0.89	□□□□□ -2.27
RPL40A	YIL148W	NMT1	P14743	455 aa		0.89	□□□□□ -2.27
RPL40A	YIL148W	DDR48	P18899	430 aa	Known RBP	0.89	□□□□□ -2.27
RPL40A	YIL148W	UGX2	P32772	223 aa		0.89	□□□□□ -2.27
RPL40A	YIL148W	YNL122C	P53921	115 aa	Predicted RBP	0.89	□□□□□ -2.27
RPL40A	YIL148W	SED1	Q01589	338 aa		0.89	□□□□□ -2.27
RPL40A	YIL148W	ARL3	Q02804	198 aa		0.89	□□□□□ -2.27
RPL40A	YIL148W	GPI11	Q06636	219 aa		0.89	□□□□□ -2.27
RPL40A	YIL148W	YPL225W	Q08971	146 aa	Known RBP	0.89	□□□□□ -2.27
RPL40A	YIL148W	YLR361C-A	Q3E795	98 aa		0.89	□□□□□ -2.27
RPL40A	YIL148W	Q0144	Q9ZZW2	109 aa		0.89	□□□□□ -2.27
RPL40A	YIL148W	CDC39	P25655	2108 aa	Known RBP	0.89	□□□□□ -2.27
RPL40A	YIL148W	YCR001W	P25347	104 aa		0.88	□□□□□ -2.27
RPL40A	YIL148W	PRS3	P38689	320 aa	Known RBP	0.88	□□□□□ -2.27
RPL40A	YIL148W	RGI1	P40043	161 aa	Predicted RBP	0.88	□□□□□ -2.27
RPL40A	YIL148W	DIE2	P50076	525 aa		0.88	□□□□□ -2.27
RPL40A	YIL148W	TMA23	Q03525	211 aa		0.88	□□□□□ -2.27
RPL40A	YIL148W	AIM36	Q03798	255 aa		0.88	□□□□□ -2.27
RPL40A	YIL148W	YMR320W	Q04897	101 aa		0.88	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms