RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W YCR075W-AQ3E830 75 aa-0.31□□□□□ -2.46
CSE1YGL238W SEC4P07560 215 aaKnown RBP-0.32□□□□□ -2.46
CSE1YGL238W RPS11AP0CX47 156 aaKnown RBP-0.32□□□□□ -2.46
CSE1YGL238W RPS11BP0CX48 156 aaKnown RBP-0.32□□□□□ -2.46
CSE1YGL238W RPL30P14120 105 aaKnown RBP-0.32□□□□□ -2.46
CSE1YGL238W SRB4P32569 687 aa-0.32□□□□□ -2.46
CSE1YGL238W SPS18P32572 300 aa-0.32□□□□□ -2.46
CSE1YGL238W MPM1P40364 252 aa-0.32□□□□□ -2.46
CSE1YGL238W NTF2P33331 125 aaKnown RBP-0.32□□□□□ -2.46
CSE1YGL238W MAK5P38112 773 aaPredicted RBP-0.32□□□□□ -2.46
CSE1YGL238W BFR1P38934 470 aaKnown RBP RIP-Chip data-0.32□□□□□ -2.46 RIP-Chip
CSE1YGL238W MRX5P47007 382 aa-0.32□□□□□ -2.46
CSE1YGL238W GGA1Q06336 557 aa-0.32□□□□□ -2.46
CSE1YGL238W YML054C-AQ3E809 52 aa-0.32□□□□□ -2.46
CSE1YGL238W HIS1P00498 297 aaKnown RBP-0.33□□□□□ -2.46
CSE1YGL238W RPL33AP05744 107 aaKnown RBP-0.33□□□□□ -2.46
CSE1YGL238W SPT3P06844 337 aa-0.33□□□□□ -2.46
CSE1YGL238W YPR170W-BP0C5R9 85 aa-0.33□□□□□ -2.46
CSE1YGL238W COX15P40086 486 aa-0.33□□□□□ -2.46
CSE1YGL238W EMC5P40540 141 aa-0.33□□□□□ -2.46
CSE1YGL238W DCV1P43595 202 aa-0.33□□□□□ -2.46
CSE1YGL238W ARP3P47117 449 aaKnown RBP-0.33□□□□□ -2.46
CSE1YGL238W SPG1P50088 95 aa-0.33□□□□□ -2.46
CSE1YGL238W YGL149WP53116 101 aa-0.33□□□□□ -2.46
CSE1YGL238W TMA23Q03525 211 aa-0.33□□□□□ -2.46
CSE1YGL238W YDR248CQ03786 193 aa-0.33□□□□□ -2.46
CSE1YGL238W YMR315WQ04869 349 aaKnown RBP-0.33□□□□□ -2.46
CSE1YGL238W COX20Q04935 205 aa-0.33□□□□□ -2.46
CSE1YGL238W YDR029WQ12111 104 aa-0.33□□□□□ -2.46
CSE1YGL238W YLR157W-EP0CF00 54 aa-0.33□□□□□ -2.46
CSE1YGL238W RAD51P25454 400 aa-0.33□□□□□ -2.46
CSE1YGL238W SKG1P36169 355 aa-0.33□□□□□ -2.46
CSE1YGL238W PAM16P42949 149 aa-0.33□□□□□ -2.46
CSE1YGL238W USE1P53146 245 aa-0.33□□□□□ -2.46
CSE1YGL238W YMR295CQ03559 197 aa-0.33□□□□□ -2.46
CSE1YGL238W FIT3Q08907 204 aa-0.33□□□□□ -2.46
CSE1YGL238W COX8P04039 78 aa-0.34□□□□□ -2.46
CSE1YGL238W COX7P10174 60 aa-0.34□□□□□ -2.46
CSE1YGL238W MAK31P23059 88 aa-0.34□□□□□ -2.46
CSE1YGL238W YCR001WP25347 104 aa-0.34□□□□□ -2.46
CSE1YGL238W IDH1P28834 360 aaKnown RBP RIP-Chip data-0.34□□□□□ -2.46not detected
CSE1YGL238W YHR127WP38833 243 aaKnown RBP-0.34□□□□□ -2.46
CSE1YGL238W PET100P38958 111 aa-0.34□□□□□ -2.46
CSE1YGL238W NOP19P53317 196 aaPredicted RBP-0.34□□□□□ -2.46
CSE1YGL238W HPT1Q04178 221 aaKnown RBP-0.34□□□□□ -2.46
CSE1YGL238W SSQ1Q05931 657 aaPredicted RBP-0.34□□□□□ -2.46
CSE1YGL238W YOR289WQ12012 251 aaPredicted RBP-0.34□□□□□ -2.46
CSE1YGL238W RPL39P04650 51 aa-0.34□□□□□ -2.46
CSE1YGL238W YHR073W-AP0C5N7 58 aa-0.34□□□□□ -2.46
CSE1YGL238W RPB3P16370 318 aaKnown RBP-0.34□□□□□ -2.46
CSE1YGL238W OPI1P21957 404 aa-0.34□□□□□ -2.46
CSE1YGL238W MRPL25P23369 157 aa-0.34□□□□□ -2.46
CSE1YGL238W AHT1P29589 182 aa-0.34□□□□□ -2.46
CSE1YGL238W NTG1P31378 399 aa-0.34□□□□□ -2.46
CSE1YGL238W SFK1P35735 353 aa-0.34□□□□□ -2.46
CSE1YGL238W YAR064WP39563 99 aa-0.34□□□□□ -2.46
CSE1YGL238W AST2P39945 430 aaKnown RBP-0.34□□□□□ -2.46
CSE1YGL238W YER137CP40083 148 aaKnown RBP-0.34□□□□□ -2.46
CSE1YGL238W MIC26P50087 233 aa-0.34□□□□□ -2.46
CSE1YGL238W YGR050CP53231 118 aa-0.34□□□□□ -2.46
CSE1YGL238W TOM7P53507 60 aa-0.34□□□□□ -2.46
CSE1YGL238W DGA1Q08650 418 aa-0.34□□□□□ -2.46
CSE1YGL238W YLR126CQ12288 251 aa-0.34□□□□□ -2.46
CSE1YGL238W YAR023CD6VPM8 179 aa-0.35□□□□□ -2.46
CSE1YGL238W MRPL28P36527 147 aa-0.35□□□□□ -2.46
CSE1YGL238W CIN5P40917 295 aa-0.35□□□□□ -2.46
CSE1YGL238W YJR015WP47090 510 aa-0.35□□□□□ -2.46
CSE1YGL238W ERI1P62651 68 aaKnown RBP-0.35□□□□□ -2.46
CSE1YGL238W YPL067CQ02754 198 aa-0.35□□□□□ -2.46
CSE1YGL238W NCE101Q02820 53 aa-0.35□□□□□ -2.46
CSE1YGL238W FIT1Q04433 528 aa-0.35□□□□□ -2.46
CSE1YGL238W MSN4P33749 630 aa-0.35□□□□□ -2.47
CSE1YGL238W VPS51P36116 164 aa-0.35□□□□□ -2.47
CSE1YGL238W ILM1P47155 203 aa-0.35□□□□□ -2.47
CSE1YGL238W SEN15Q04675 128 aa-0.35□□□□□ -2.47
CSE1YGL238W LDB18Q07887 179 aa-0.35□□□□□ -2.47
CSE1YGL238W SCS22Q6Q595 175 aa-0.35□□□□□ -2.47
CSE1YGL238W ADK1P07170 222 aaKnown RBP-0.35□□□□□ -2.47
CSE1YGL238W MRPL24P36525 258 aaPredicted RBP-0.35□□□□□ -2.47
CSE1YGL238W LDB7P38210 180 aa-0.35□□□□□ -2.47
CSE1YGL238W YFL019CP43576 117 aa-0.35□□□□□ -2.47
CSE1YGL238W ERV25P54837 211 aaKnown RBP-0.35□□□□□ -2.47
CSE1YGL238W YMD8Q03697 442 aa-0.35□□□□□ -2.47
CSE1YGL238W YMR226CQ05016 267 aaKnown RBP-0.35□□□□□ -2.47
CSE1YGL238W YHR050W-AQ05451 56 aa-0.35□□□□□ -2.47
CSE1YGL238W ECM12O13529 151 aa-0.36□□□□□ -2.47
CSE1YGL238W YKR070WP36151 352 aaKnown RBP-0.36□□□□□ -2.47
CSE1YGL238W FES1P38260 290 aa-0.36□□□□□ -2.47
CSE1YGL238W YHL005CP38752 130 aa-0.36□□□□□ -2.47
CSE1YGL238W PDS1P40316 373 aaPredicted RBP-0.36□□□□□ -2.47
CSE1YGL238W AIM25P47140 327 aa-0.36□□□□□ -2.47
CSE1YGL238W NRK1P53915 240 aa-0.36□□□□□ -2.47
CSE1YGL238W SNZ1Q03148 297 aa-0.36□□□□□ -2.47
CSE1YGL238W ARO80Q04052 950 aa-0.36□□□□□ -2.47
CSE1YGL238W KEI1Q06346 221 aa-0.36□□□□□ -2.47
CSE1YGL238W RRT7Q07829 113 aa-0.36□□□□□ -2.47
CSE1YGL238W YHR213W-BQ8TGK1 99 aa-0.36□□□□□ -2.47
CSE1YGL238W NHP6BP11633 99 aaKnown RBP-0.36□□□□□ -2.47
CSE1YGL238W ATG22P25568 528 aa-0.36□□□□□ -2.47
CSE1YGL238W PAN3P36102 679 aaPredicted RBP-0.36□□□□□ -2.47
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms