RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C SFT2P38166 215 aa4.56□□□□□ -1.68
SEC20YDR498C YFL054CP43549 646 aa4.56□□□□□ -1.68
SEC20YDR498C YGR149WP48236 432 aa4.56□□□□□ -1.68
SEC20YDR498C RKI1Q12189 258 aa4.56□□□□□ -1.68
SEC20YDR498C FMP49A0A023PZB3 126 aa4.55□□□□□ -1.68
SEC20YDR498C YLR302CO13544 120 aa4.55□□□□□ -1.68
SEC20YDR498C DFR1P07807 211 aaKnown RBP RIP-Chip data4.55□□□□□ -1.68not detected
SEC20YDR498C YGL010WP25338 174 aa4.55□□□□□ -1.68
SEC20YDR498C HMX1P32339 317 aa4.55□□□□□ -1.68
SEC20YDR498C FZF1P32805 299 aa4.55□□□□□ -1.68
SEC20YDR498C PAM17P36147 197 aa4.55□□□□□ -1.68
SEC20YDR498C YHR173CP38864 112 aa4.55□□□□□ -1.68
SEC20YDR498C HSP10P38910 106 aa4.55□□□□□ -1.68
SEC20YDR498C SNU13P39990 126 aaKnown RBP4.55□□□□□ -1.68
SEC20YDR498C CYB5P40312 120 aa4.55□□□□□ -1.68
SEC20YDR498C CYT2Q00873 224 aa4.55□□□□□ -1.68
SEC20YDR498C POR1P04840 283 aaKnown RBP4.54□□□□□ -1.68
SEC20YDR498C MRPL38P35996 138 aaPredicted RBP4.54□□□□□ -1.68
SEC20YDR498C ICS2P38284 255 aa4.54□□□□□ -1.68
SEC20YDR498C YGR025WP53216 100 aa4.54□□□□□ -1.68
SEC20YDR498C YNR071CP53757 342 aa4.54□□□□□ -1.68
SEC20YDR498C SWT21P53873 357 aaPredicted RBP4.54□□□□□ -1.68
SEC20YDR498C ILV5P06168 395 aaKnown RBP4.53□□□□□ -1.68
SEC20YDR498C FRS1P15624 595 aaKnown RBP4.53□□□□□ -1.68
SEC20YDR498C QRI5P32344 111 aa4.53□□□□□ -1.68
SEC20YDR498C MIX23P38162 196 aa4.53□□□□□ -1.68
SEC20YDR498C YMR141CP40211 102 aa4.53□□□□□ -1.68
SEC20YDR498C AIM24P47127 394 aa4.53□□□□□ -1.68
SEC20YDR498C YIP1P53039 248 aa4.53□□□□□ -1.68
SEC20YDR498C YPR063CQ12160 140 aa4.53□□□□□ -1.68
SEC20YDR498C DCN1Q12395 269 aa4.53□□□□□ -1.68
SEC20YDR498C YCR024C-BQ3E7Z8 88 aa4.53□□□□□ -1.68
SEC20YDR498C YCL001W-BQ96VH2 84 aa4.53□□□□□ -1.68
SEC20YDR498C RPL11AP0C0W9 174 aaKnown RBP4.52□□□□□ -1.69
SEC20YDR498C TIR1P10863 254 aa4.52□□□□□ -1.69
SEC20YDR498C CUP2P15315 225 aa4.52□□□□□ -1.69
SEC20YDR498C HSP12P22943 109 aaKnown RBP4.52□□□□□ -1.69
SEC20YDR498C SSS1P35179 80 aa4.52□□□□□ -1.69
SEC20YDR498C DAD2P36162 133 aa4.52□□□□□ -1.69
SEC20YDR498C RRT1P38192 103 aa4.52□□□□□ -1.69
SEC20YDR498C SUR2P38992 349 aa4.52□□□□□ -1.69
SEC20YDR498C YGR219WP53307 113 aa4.52□□□□□ -1.69
SEC20YDR498C ATP19P81451 68 aa4.52□□□□□ -1.69
SEC20YDR498C APS2Q00381 147 aa4.52□□□□□ -1.69
SEC20YDR498C YPL108WQ02872 168 aaPredicted RBP4.52□□□□□ -1.69
SEC20YDR498C MRX11Q03079 207 aa4.52□□□□□ -1.69
SEC20YDR498C YPR013CQ12145 317 aa4.52□□□□□ -1.69
SEC20YDR498C SMT3Q12306 101 aaKnown RBP4.52□□□□□ -1.69
SEC20YDR498C RPL11BQ3E757 174 aaPredicted RBP4.52□□□□□ -1.69
SEC20YDR498C YNR034W-AQ3E841 98 aa4.52□□□□□ -1.69
SEC20YDR498C MRS1P07266 363 aa4.51□□□□□ -1.69
SEC20YDR498C SUA7P29055 345 aaPredicted RBP4.51□□□□□ -1.69
SEC20YDR498C YMR181CQ03231 154 aa4.51□□□□□ -1.69
SEC20YDR498C CUE4Q04201 117 aaPredicted RBP4.51□□□□□ -1.69
SEC20YDR498C YOR105WQ08504 108 aa4.51□□□□□ -1.69
SEC20YDR498C TIM18Q08749 192 aa4.51□□□□□ -1.69
SEC20YDR498C TMA17Q12513 150 aa4.51□□□□□ -1.69
SEC20YDR498C CYC3P06182 269 aa4.5□□□□□ -1.69
SEC20YDR498C DDI2P0CH63 225 aa4.5□□□□□ -1.69
SEC20YDR498C DDI3P0CH64 225 aa4.5□□□□□ -1.69
SEC20YDR498C LCB3P47013 409 aa4.5□□□□□ -1.69
SEC20YDR498C COX18P53239 316 aa4.5□□□□□ -1.69
SEC20YDR498C IZH1Q03419 316 aa4.5□□□□□ -1.69
SEC20YDR498C ATX2Q12067 313 aa4.5□□□□□ -1.69
SEC20YDR498C ERG27Q12452 347 aaKnown RBP4.5□□□□□ -1.69
SEC20YDR498C CPT1P17898 393 aa4.49□□□□□ -1.69
SEC20YDR498C INO2P26798 304 aa4.49□□□□□ -1.69
SEC20YDR498C ACP1P32463 125 aa4.49□□□□□ -1.69
SEC20YDR498C TCA17P32613 152 aa4.49□□□□□ -1.69
SEC20YDR498C YHL044WP38727 235 aa4.49□□□□□ -1.69
SEC20YDR498C MBB1P39534 108 aa4.49□□□□□ -1.69
SEC20YDR498C OST3P48439 350 aa4.49□□□□□ -1.69
SEC20YDR498C CMC2Q3E7A4 109 aa4.49□□□□□ -1.69
SEC20YDR498C YIL134C-AQ45U18 67 aa4.49□□□□□ -1.69
SEC20YDR498C HTB2P02294 131 aa4.48□□□□□ -1.69
SEC20YDR498C SEC4P07560 215 aaKnown RBP4.48□□□□□ -1.69
SEC20YDR498C MRPL31P14063 131 aaPredicted RBP4.48□□□□□ -1.69
SEC20YDR498C PHO85P17157 305 aa4.48□□□□□ -1.69
SEC20YDR498C TIR2P33890 251 aa4.48□□□□□ -1.69
SEC20YDR498C LSM4P40070 187 aaKnown RBP4.48□□□□□ -1.69
SEC20YDR498C YIL077CP40508 320 aa4.48□□□□□ -1.69
SEC20YDR498C BNA1P47096 177 aa4.48□□□□□ -1.69
SEC20YDR498C ABM1P47146 123 aa4.48□□□□□ -1.69
SEC20YDR498C SDH7Q04401 133 aa4.48□□□□□ -1.69
SEC20YDR498C YOL160WQ08321 113 aa4.48□□□□□ -1.69
SEC20YDR498C YER145C-AA0A023PYF4 145 aa4.47□□□□□ -1.69
SEC20YDR498C HMRA1P0CY11 126 aa4.47□□□□□ -1.69
SEC20YDR498C YPT10P38146 199 aa4.47□□□□□ -1.69
SEC20YDR498C MIC12P38341 106 aa4.47□□□□□ -1.69
SEC20YDR498C YER134CP40081 178 aa4.47□□□□□ -1.69
SEC20YDR498C SPI1P40092 148 aa4.47□□□□□ -1.69
SEC20YDR498C CDC40P40968 455 aaPredicted RBP4.47□□□□□ -1.69
SEC20YDR498C YJL028WP47062 111 aa4.47□□□□□ -1.69
SEC20YDR498C PUS4P48567 403 aaKnown RBP4.47□□□□□ -1.69
SEC20YDR498C YDL183CP48569 320 aa4.47□□□□□ -1.69
SEC20YDR498C GIM5Q04493 163 aa4.47□□□□□ -1.69
SEC20YDR498C SPO24Q3E752 67 aa4.47□□□□□ -1.69
SEC20YDR498C YKL069WP36088 180 aa4.46□□□□□ -1.7
SEC20YDR498C IRC22P40006 225 aa4.46□□□□□ -1.7
SEC20YDR498C YFR045WP43617 309 aa4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms