RNA–Protein interactions for RNA: YDR489W

SLD5, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeastyeast

Gene SLD5, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD5YDR489W PRE1P22141 198 aaKnown RBP1.11□□□□□ -2.23
SLD5YDR489W PEX34P25584 144 aa1.11□□□□□ -2.23
SLD5YDR489W ATG8P38182 117 aaRIP-Chip data1.11□□□□□ -2.23not detected
SLD5YDR489W YJL218WP40892 196 aaKnown RBP1.11□□□□□ -2.23
SLD5YDR489W RPL37BP51402 88 aaKnown RBP1.11□□□□□ -2.23
SLD5YDR489W GEP7P53171 287 aa1.11□□□□□ -2.23
SLD5YDR489W FMN1Q03778 218 aa1.11□□□□□ -2.23
SLD5YDR489W NMA1Q06178 401 aaKnown RBP1.11□□□□□ -2.23
SLD5YDR489W IRC19Q07843 230 aa1.11□□□□□ -2.23
SLD5YDR489W RFU1Q08003 200 aa1.11□□□□□ -2.23
SLD5YDR489W FCY1Q12178 158 aa1.11□□□□□ -2.23
SLD5YDR489W RIB3Q99258 208 aa1.11□□□□□ -2.23
SLD5YDR489W RPS28BP0C0X0 67 aaKnown RBP1.1□□□□□ -2.23
SLD5YDR489W BUB2P26448 306 aaPredicted RBP1.1□□□□□ -2.23
SLD5YDR489W ARC19P33204 171 aaKnown RBP1.1□□□□□ -2.23
SLD5YDR489W FIG1P38224 298 aa1.1□□□□□ -2.23
SLD5YDR489W YEL014CP39999 101 aa1.1□□□□□ -2.23
SLD5YDR489W YIL102CP40488 101 aa1.1□□□□□ -2.23
SLD5YDR489W TMA23Q03525 211 aa1.1□□□□□ -2.23
SLD5YDR489W RPS28AQ3E7X9 67 aaPredicted RBP1.1□□□□□ -2.23
SLD5YDR489W SCS22Q6Q595 175 aa1.1□□□□□ -2.23
SLD5YDR489W YOL013W-AP0C272 63 aaPredicted RBP1.09□□□□□ -2.23
SLD5YDR489W PBI2P0CT04 75 aaKnown RBP1.09□□□□□ -2.23
SLD5YDR489W HSP150P32478 413 aa1.09□□□□□ -2.23
SLD5YDR489W YBR027CP38220 110 aa1.09□□□□□ -2.23
SLD5YDR489W YGL193CP53097 103 aa1.09□□□□□ -2.23
SLD5YDR489W RCF2P53721 224 aa1.09□□□□□ -2.23
SLD5YDR489W PET20Q99373 253 aa1.09□□□□□ -2.23
SLD5YDR489W IPT1P38954 527 aa1.07□□□□□ -2.24
SLD5YDR489W SEN15Q04675 128 aa1.07□□□□□ -2.24
SLD5YDR489W VAM10Q08474 114 aa1.06□□□□□ -2.24
SLD5YDR489W YCR001WP25347 104 aa1.05□□□□□ -2.24
SLD5YDR489W ECM31P38122 312 aa1.05□□□□□ -2.24
SLD5YDR489W IPI1P38803 334 aaPredicted RBP1.05□□□□□ -2.24
SLD5YDR489W MOG1P47123 218 aa1.05□□□□□ -2.24
SLD5YDR489W DIE2P50076 525 aa1.05□□□□□ -2.24
SLD5YDR489W GSC2P40989 1895 aa1.04□□□□□ -2.24
SLD5YDR489W VMA10P48836 114 aaKnown RBP1.04□□□□□ -2.24
SLD5YDR489W EST3Q03096 181 aa1.04□□□□□ -2.24
SLD5YDR489W COX5BP00425 151 aa1.03□□□□□ -2.24
SLD5YDR489W YGL041W-AP0C5N3 154 aa1.03□□□□□ -2.24
SLD5YDR489W HSP12P22943 109 aaKnown RBP1.03□□□□□ -2.24
SLD5YDR489W YGR201CP42936 225 aa1.03□□□□□ -2.24
SLD5YDR489W YCL001W-AP87012 153 aa1.03□□□□□ -2.24
SLD5YDR489W YMR320WQ04897 101 aa1.03□□□□□ -2.24
SLD5YDR489W GPI11Q06636 219 aa1.03□□□□□ -2.24
SLD5YDR489W RRT7Q07829 113 aa1.03□□□□□ -2.24
SLD5YDR489W HYP2P23301 157 aaKnown RBP1.02□□□□□ -2.25
SLD5YDR489W HHY1P39982 102 aa1.02□□□□□ -2.25
SLD5YDR489W GPI2P46961 280 aa1.02□□□□□ -2.25
SLD5YDR489W ATP19P81451 68 aa1.02□□□□□ -2.25
SLD5YDR489W PKR1Q03880 122 aaKnown RBP1.02□□□□□ -2.25
SLD5YDR489W YPR153WQ06537 140 aa1.02□□□□□ -2.25
SLD5YDR489W MHF1Q3E835 90 aa1.02□□□□□ -2.25
SLD5YDR489W HSL1P34244 1518 aa1.01□□□□□ -2.25
SLD5YDR489W FMP49A0A023PZB3 126 aa1.01□□□□□ -2.25
SLD5YDR489W FYV5P25585 152 aa1□□□□□ -2.25
SLD5YDR489W EFM5P53200 248 aaKnown RBP1□□□□□ -2.25
SLD5YDR489W RAV2Q03956 351 aa1□□□□□ -2.25
SLD5YDR489W ROM2P51862 1356 aaKnown RBP0.99□□□□□ -2.25
SLD5YDR489W RPL33AP05744 107 aaKnown RBP0.99□□□□□ -2.25
SLD5YDR489W PET54P10834 293 aa0.99□□□□□ -2.25
SLD5YDR489W NHP6AP11632 93 aaKnown RBP0.99□□□□□ -2.25
SLD5YDR489W SED1Q01589 338 aa0.99□□□□□ -2.25
SLD5YDR489W YOR1P53049 1477 aa0.98□□□□□ -2.25
SLD5YDR489W LAA1P39526 2014 aa0.98□□□□□ -2.25
SLD5YDR489W HAP2P06774 265 aa0.97□□□□□ -2.25
SLD5YDR489W YGL014C-AP0C5N1 53 aa0.97□□□□□ -2.25
SLD5YDR489W RPS1BP23248 255 aaKnown RBP0.97□□□□□ -2.25
SLD5YDR489W YNL122CP53921 115 aaPredicted RBP0.97□□□□□ -2.25
SLD5YDR489W PHB1P40961 287 aa0.95□□□□□ -2.26
SLD5YDR489W MGR2Q02889 113 aa0.95□□□□□ -2.26
SLD5YDR489W SOM1Q05676 74 aa0.95□□□□□ -2.26
SLD5YDR489W YOR072WQ08486 104 aa0.95□□□□□ -2.26
SLD5YDR489W YHR213W-BQ8TGK1 99 aa0.95□□□□□ -2.26
SLD5YDR489W RPL40AP0CH08 128 aaKnown RBP0.94□□□□□ -2.26
SLD5YDR489W RPL40BP0CH09 128 aaKnown RBP0.94□□□□□ -2.26
SLD5YDR489W SUI1P32911 108 aaKnown RBP0.94□□□□□ -2.26
SLD5YDR489W RBL2P48606 106 aaKnown RBP0.94□□□□□ -2.26
SLD5YDR489W YNL019CP53975 284 aa0.94□□□□□ -2.26
SLD5YDR489W PRM3Q08931 133 aa0.94□□□□□ -2.26
SLD5YDR489W HUT1Q12520 339 aa0.94□□□□□ -2.26
SLD5YDR489W RPS22AP0C0W1 130 aaKnown RBP0.93□□□□□ -2.26
SLD5YDR489W LSM1P47017 172 aaKnown RBP0.93□□□□□ -2.26
SLD5YDR489W YDR366CP87287 132 aa0.93□□□□□ -2.26
SLD5YDR489W COF1Q03048 143 aaKnown RBP0.93□□□□□ -2.26
SLD5YDR489W YMR122CQ03879 124 aa0.93□□□□□ -2.26
SLD5YDR489W RPS22BQ3E7Y3 130 aaKnown RBP0.93□□□□□ -2.26
SLD5YDR489W FUN14P18411 198 aa0.92□□□□□ -2.26
SLD5YDR489W YOR385WQ08909 290 aa0.92□□□□□ -2.26
SLD5YDR489W PRP8P33334 2413 aaKnown RBP0.91□□□□□ -2.26
SLD5YDR489W RPS1AP33442 255 aaKnown RBP0.91□□□□□ -2.26
SLD5YDR489W UTP11P34247 250 aaPredicted RBP0.91□□□□□ -2.26
SLD5YDR489W AIM4P38305 123 aaPredicted RBP0.91□□□□□ -2.26
SLD5YDR489W LSM8P47093 109 aaKnown RBP0.91□□□□□ -2.26
SLD5YDR489W YGL149WP53116 101 aa0.91□□□□□ -2.26
SLD5YDR489W YPL067CQ02754 198 aa0.91□□□□□ -2.26
SLD5YDR489W KTI11Q3E840 82 aa0.91□□□□□ -2.26
SLD5YDR489W TRS20P38334 175 aa0.9□□□□□ -2.27
SLD5YDR489W YHR140WP38842 239 aa0.9□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 76.5 ms