RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W YGR296C-BP0CX96 160 aa6.48□□□□□ -1.37
NDE2YDL085W YPL283W-BP0CX97 160 aa6.48□□□□□ -1.37
NDE2YDL085W YPR204C-AP0CX98 160 aa6.48□□□□□ -1.37
NDE2YDL085W CUP2P15315 225 aa6.48□□□□□ -1.37
NDE2YDL085W NNK1P36003 928 aa6.48□□□□□ -1.37
NDE2YDL085W PMU1P36069 295 aa6.48□□□□□ -1.37
NDE2YDL085W YER121WP40076 114 aa6.48□□□□□ -1.37
NDE2YDL085W PRE5P40302 234 aaKnown RBP6.48□□□□□ -1.37
NDE2YDL085W YGR017WP53210 297 aa6.48□□□□□ -1.37
NDE2YDL085W ATP19P81451 68 aa6.48□□□□□ -1.37
NDE2YDL085W PAU23Q07987 124 aa6.48□□□□□ -1.37
NDE2YDL085W PAU17Q12370 124 aa6.48□□□□□ -1.37
NDE2YDL085W YBL071CP38185 102 aa6.47□□□□□ -1.37
NDE2YDL085W YGL260WP53056 76 aa6.47□□□□□ -1.37
NDE2YDL085W YNR064CP53750 290 aa6.47□□□□□ -1.37
NDE2YDL085W SED1Q01589 338 aa6.47□□□□□ -1.37
NDE2YDL085W YLR302CO13544 120 aa6.47□□□□□ -1.37
NDE2YDL085W TIR1P10863 254 aa6.46□□□□□ -1.38
NDE2YDL085W HEM13P11353 328 aaKnown RBP6.46□□□□□ -1.38
NDE2YDL085W YCR007CP25354 239 aa6.46□□□□□ -1.38
NDE2YDL085W YBR090CP38253 122 aa6.46□□□□□ -1.38
NDE2YDL085W CSH1P38287 376 aa6.46□□□□□ -1.38
NDE2YDL085W TEM1P38987 245 aa6.46□□□□□ -1.38
NDE2YDL085W YFL054CP43549 646 aa6.46□□□□□ -1.38
NDE2YDL085W YIP1P53039 248 aa6.46□□□□□ -1.38
NDE2YDL085W YGL118CP53132 145 aa6.46□□□□□ -1.38
NDE2YDL085W YMR166CQ03829 368 aa6.46□□□□□ -1.38
NDE2YDL085W SDH7Q04401 133 aa6.46□□□□□ -1.38
NDE2YDL085W YTH1Q06102 208 aaPredicted RBP6.46□□□□□ -1.38
NDE2YDL085W YPL257WQ08974 193 aa6.46□□□□□ -1.38
NDE2YDL085W YDL009CQ12210 107 aa6.46□□□□□ -1.38
NDE2YDL085W ECM14P38836 430 aa6.45□□□□□ -1.38
NDE2YDL085W YJL028WP47062 111 aa6.45□□□□□ -1.38
NDE2YDL085W TDA4P47153 279 aa6.45□□□□□ -1.38
NDE2YDL085W YNR071CP53757 342 aa6.45□□□□□ -1.38
NDE2YDL085W IRC25Q07951 179 aa6.45□□□□□ -1.38
NDE2YDL085W IZH3Q07959 543 aa6.45□□□□□ -1.38
NDE2YDL085W FIT2Q08906 153 aa6.45□□□□□ -1.38
NDE2YDL085W YDL157CQ12082 118 aa6.45□□□□□ -1.38
NDE2YDL085W SEC4P07560 215 aaKnown RBP6.44□□□□□ -1.38
NDE2YDL085W IES6P32617 166 aa6.44□□□□□ -1.38
NDE2YDL085W GPI18P38211 433 aa6.44□□□□□ -1.38
NDE2YDL085W BDH1P39714 382 aa6.44□□□□□ -1.38
NDE2YDL085W COX18P53239 316 aa6.44□□□□□ -1.38
NDE2YDL085W CSI2Q08054 341 aa6.44□□□□□ -1.38
NDE2YDL085W WIP1Q2V2P8 89 aa6.44□□□□□ -1.38
NDE2YDL085W COX2P00410 251 aa6.43□□□□□ -1.38
NDE2YDL085W ZRT1P32804 376 aa6.43□□□□□ -1.38
NDE2YDL085W YGP1P38616 354 aaKnown RBP6.43□□□□□ -1.38
NDE2YDL085W PRE3P38624 215 aa6.43□□□□□ -1.38
NDE2YDL085W SEC72P39742 193 aaKnown RBP6.43□□□□□ -1.38
NDE2YDL085W MRX11Q03079 207 aa6.43□□□□□ -1.38
NDE2YDL085W RAV2Q03956 351 aa6.43□□□□□ -1.38
NDE2YDL085W YPL162CQ12042 273 aa6.43□□□□□ -1.38
NDE2YDL085W YOR029WQ12243 111 aa6.43□□□□□ -1.38
NDE2YDL085W UTR5P32630 166 aa6.43□□□□□ -1.38
NDE2YDL085W SPC29P33419 253 aa6.43□□□□□ -1.38
NDE2YDL085W ADH5P38113 351 aaKnown RBP6.43□□□□□ -1.38
NDE2YDL085W CTR2P38865 189 aa6.43□□□□□ -1.38
NDE2YDL085W LST8P41318 303 aa6.43□□□□□ -1.38
NDE2YDL085W YFL015CP43578 164 aa6.43□□□□□ -1.38
NDE2YDL085W MIX17Q03667 156 aa6.43□□□□□ -1.38
NDE2YDL085W MSC3Q05812 728 aa6.43□□□□□ -1.38
NDE2YDL085W TOR2P32600 2474 aaKnown RBP6.42□□□□□ -1.38
NDE2YDL085W MIG1P27705 504 aa6.42□□□□□ -1.38
NDE2YDL085W YGR151CP53287 111 aa6.42□□□□□ -1.38
NDE2YDL085W RKI1Q12189 258 aa6.42□□□□□ -1.38
NDE2YDL085W YPT10P38146 199 aa6.41□□□□□ -1.38
NDE2YDL085W SFT2P38166 215 aa6.41□□□□□ -1.38
NDE2YDL085W DOG2P38773 246 aa6.41□□□□□ -1.38
NDE2YDL085W HAC1P41546 238 aa6.41□□□□□ -1.38
NDE2YDL085W YAR1P46683 200 aa6.41□□□□□ -1.38
NDE2YDL085W SBH2P52871 88 aa6.41□□□□□ -1.38
NDE2YDL085W YGL230CP53074 147 aa6.41□□□□□ -1.38
NDE2YDL085W SDS23P53172 527 aa6.41□□□□□ -1.38
NDE2YDL085W YGR045CP53229 120 aa6.41□□□□□ -1.38
NDE2YDL085W YDR366CP87287 132 aa6.41□□□□□ -1.38
NDE2YDL085W YPL080CQ02826 108 aa6.41□□□□□ -1.38
NDE2YDL085W MRS1P07266 363 aa6.4□□□□□ -1.38
NDE2YDL085W YCR022CP25620 114 aa6.4□□□□□ -1.38
NDE2YDL085W MSL1P40567 111 aaPredicted RBP6.4□□□□□ -1.38
NDE2YDL085W GZF3P42944 551 aaKnown RBP6.4□□□□□ -1.38
NDE2YDL085W YGR018CP53211 109 aa6.4□□□□□ -1.38
NDE2YDL085W TOM7P53507 60 aa6.4□□□□□ -1.38
NDE2YDL085W DDI2P0CH63 225 aa6.39□□□□□ -1.39
NDE2YDL085W DDI3P0CH64 225 aa6.39□□□□□ -1.39
NDE2YDL085W FEN2P25621 512 aaKnown RBP6.39□□□□□ -1.39
NDE2YDL085W MTR2P34232 184 aaKnown RBP6.39□□□□□ -1.39
NDE2YDL085W YHL044WP38727 235 aa6.39□□□□□ -1.39
NDE2YDL085W FYV4P38783 130 aaPredicted RBP6.39□□□□□ -1.39
NDE2YDL085W YJL163CP46996 555 aa6.39□□□□□ -1.39
NDE2YDL085W THG1P53215 237 aaKnown RBP6.39□□□□□ -1.39
NDE2YDL085W CYC3P06182 269 aa6.39□□□□□ -1.39
NDE2YDL085W RPL23AP0CX41 137 aaKnown RBP6.39□□□□□ -1.39
NDE2YDL085W RPL23BP0CX42 137 aaKnown RBP6.39□□□□□ -1.39
NDE2YDL085W SEC11P15367 167 aa6.39□□□□□ -1.39
NDE2YDL085W PHO85P17157 305 aa6.39□□□□□ -1.39
NDE2YDL085W RRT1P38192 103 aa6.39□□□□□ -1.39
NDE2YDL085W PAU7P39545 55 aa6.39□□□□□ -1.39
NDE2YDL085W BNA1P47096 177 aa6.39□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms