RNA–Protein interactions for RNA: YDL076C

RXT3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene RXT3, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RXT3YDL076C YJR085CP47131 105 aaKnown RBP3.27□□□□□ -1.89
RXT3YDL076C TPN1P53099 579 aa3.27□□□□□ -1.89
RXT3YDL076C MST27P53176 234 aa3.27□□□□□ -1.89
RXT3YDL076C PNC1P53184 216 aaKnown RBP3.27□□□□□ -1.89
RXT3YDL076C VPS28Q02767 242 aa3.27□□□□□ -1.89
RXT3YDL076C SGF11Q03067 99 aa3.27□□□□□ -1.89
RXT3YDL076C YMR230W-AQ3E7B5 62 aa3.27□□□□□ -1.89
RXT3YDL076C YCR075W-AQ3E830 75 aa3.27□□□□□ -1.89
RXT3YDL076C VMA22P38784 181 aa3.26□□□□□ -1.89
RXT3YDL076C YFR057WP43625 151 aa3.26□□□□□ -1.89
RXT3YDL076C GPI2P46961 280 aa3.26□□□□□ -1.89
RXT3YDL076C NIF3P53081 288 aa3.26□□□□□ -1.89
RXT3YDL076C PDR17P53844 350 aa3.26□□□□□ -1.89
RXT3YDL076C HAL1Q01766 294 aa3.26□□□□□ -1.89
RXT3YDL076C LOA1Q06508 300 aa3.26□□□□□ -1.89
RXT3YDL076C FEX1Q08913 375 aa3.26□□□□□ -1.89
RXT3YDL076C FEX2Q08991 375 aa3.26□□□□□ -1.89
RXT3YDL076C YPR063CQ12160 140 aa3.26□□□□□ -1.89
RXT3YDL076C IES3Q12345 250 aa3.26□□□□□ -1.89
RXT3YDL076C FCY2P17064 533 aa3.25□□□□□ -1.89
RXT3YDL076C YCR016WP25617 290 aaKnown RBP3.25□□□□□ -1.89
RXT3YDL076C NRG2P38082 220 aa3.25□□□□□ -1.89
RXT3YDL076C YIR035CP40579 254 aa3.25□□□□□ -1.89
RXT3YDL076C SNX4P47057 423 aa3.25□□□□□ -1.89
RXT3YDL076C MIC26P50087 233 aa3.25□□□□□ -1.89
RXT3YDL076C CWC23P52868 283 aaPredicted RBP3.25□□□□□ -1.89
RXT3YDL076C YIP3P53633 176 aa3.25□□□□□ -1.89
RXT3YDL076C YOR011W-AQ3E807 68 aa3.25□□□□□ -1.89
RXT3YDL076C TAR1Q8TGM6 124 aa3.25□□□□□ -1.89
RXT3YDL076C CDC7P06243 507 aa3.24□□□□□ -1.89
RXT3YDL076C SPS2P08459 502 aa3.24□□□□□ -1.89
RXT3YDL076C ACB1P31787 87 aa3.24□□□□□ -1.89
RXT3YDL076C YKL162CP36052 402 aa3.24□□□□□ -1.89
RXT3YDL076C CSH1P38287 376 aa3.24□□□□□ -1.89
RXT3YDL076C BDH1P39714 382 aa3.24□□□□□ -1.89
RXT3YDL076C SNU13P39990 126 aaKnown RBP3.24□□□□□ -1.89
RXT3YDL076C FRQ1Q06389 190 aa3.24□□□□□ -1.89
RXT3YDL076C RDS3Q06835 107 aaPredicted RBP3.24□□□□□ -1.89
RXT3YDL076C YHR213W-AQ8TGT4 77 aa3.24□□□□□ -1.89
RXT3YDL076C TPI1P00942 248 aaKnown RBP3.23□□□□□ -1.89
RXT3YDL076C RPS25BP0C0T4 108 aaKnown RBP3.23□□□□□ -1.89
RXT3YDL076C RPL2AP0CX45 254 aaKnown RBP3.23□□□□□ -1.89
RXT3YDL076C RPL2BP0CX46 254 aaKnown RBP3.23□□□□□ -1.89
RXT3YDL076C SPT14P32363 452 aa3.23□□□□□ -1.89
RXT3YDL076C YPC1P38298 316 aa3.23□□□□□ -1.89
RXT3YDL076C YBR242WP38331 238 aa3.23□□□□□ -1.89
RXT3YDL076C CDC40P40968 455 aaPredicted RBP3.23□□□□□ -1.89
RXT3YDL076C YCH1P42937 148 aa3.23□□□□□ -1.89
RXT3YDL076C MIC27P50945 234 aa3.23□□□□□ -1.89
RXT3YDL076C BOR1P53838 576 aa3.23□□□□□ -1.89
RXT3YDL076C YLR179CQ06252 201 aaKnown RBP3.23□□□□□ -1.89
RXT3YDL076C VAM10Q08474 114 aa3.23□□□□□ -1.89
RXT3YDL076C YPL264CQ08980 353 aa3.23□□□□□ -1.89
RXT3YDL076C YLR146W-AQ2V2P1 62 aa3.23□□□□□ -1.89
RXT3YDL076C RPS25AQ3E792 108 aaPredicted RBP3.23□□□□□ -1.89
RXT3YDL076C YNL146C-AQ3E7Z1 64 aa3.23□□□□□ -1.89
RXT3YDL076C RPL23AP0CX41 137 aaKnown RBP3.22□□□□□ -1.89
RXT3YDL076C RPL23BP0CX42 137 aaKnown RBP3.22□□□□□ -1.89
RXT3YDL076C RPS11AP0CX47 156 aaKnown RBP3.22□□□□□ -1.89
RXT3YDL076C RPS11BP0CX48 156 aaKnown RBP3.22□□□□□ -1.89
RXT3YDL076C NHP6BP11633 99 aaKnown RBP3.22□□□□□ -1.89
RXT3YDL076C SLM6P38343 150 aa3.22□□□□□ -1.89
RXT3YDL076C YJR015WP47090 510 aa3.22□□□□□ -1.89
RXT3YDL076C YGL185CP53100 379 aa3.22□□□□□ -1.89
RXT3YDL076C HCH1P53834 153 aa3.22□□□□□ -1.89
RXT3YDL076C GIS2P53849 153 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
RXT3YDL076C DID2P69771 204 aa3.22□□□□□ -1.89
RXT3YDL076C MRPS8Q03799 155 aa3.22□□□□□ -1.89
RXT3YDL076C YPR145C-AQ2V2P0 78 aa3.22□□□□□ -1.89
RXT3YDL076C ARG80P07249 177 aa3.21□□□□□ -1.9
RXT3YDL076C YKL070WP36087 169 aa3.21□□□□□ -1.9
RXT3YDL076C SFT2P38166 215 aa3.21□□□□□ -1.9
RXT3YDL076C SWM2P40342 146 aa3.21□□□□□ -1.9
RXT3YDL076C YJL027CP47063 138 aaPredicted RBP3.21□□□□□ -1.9
RXT3YDL076C YGR018CP53211 109 aa3.21□□□□□ -1.9
RXT3YDL076C HST4P53688 370 aa3.21□□□□□ -1.9
RXT3YDL076C FCF2Q12035 217 aaPredicted RBP3.21□□□□□ -1.9
RXT3YDL076C YPR013CQ12145 317 aa3.21□□□□□ -1.9
RXT3YDL076C PRM7Q12459 698 aa3.21□□□□□ -1.9
RXT3YDL076C EMP24P32803 203 aaKnown RBP3.2□□□□□ -1.9
RXT3YDL076C COX16P47081 118 aa3.2□□□□□ -1.9
RXT3YDL076C YPL080CQ02826 108 aa3.2□□□□□ -1.9
RXT3YDL076C YMR244WQ04018 355 aa3.2□□□□□ -1.9
RXT3YDL076C SHH3Q04487 196 aa3.2□□□□□ -1.9
RXT3YDL076C POC4Q12245 148 aaPredicted RBP3.2□□□□□ -1.9
RXT3YDL076C HSP12P22943 109 aaKnown RBP3.19□□□□□ -1.9
RXT3YDL076C YCR001WP25347 104 aa3.19□□□□□ -1.9
RXT3YDL076C ZRT1P32804 376 aa3.19□□□□□ -1.9
RXT3YDL076C OXA1P39952 402 aa3.19□□□□□ -1.9
RXT3YDL076C YER135CP40082 130 aa3.19□□□□□ -1.9
RXT3YDL076C BNS1P50084 137 aa3.19□□□□□ -1.9
RXT3YDL076C FMP41P53889 259 aaKnown RBP3.19□□□□□ -1.9
RXT3YDL076C RRT7Q07829 113 aa3.19□□□□□ -1.9
RXT3YDL076C FMP16Q12497 93 aa3.19□□□□□ -1.9
RXT3YDL076C PUT1P09368 476 aa3.18□□□□□ -1.9
RXT3YDL076C YHR213WP0CI67 198 aa3.18□□□□□ -1.9
RXT3YDL076C QCR9P22289 66 aa3.18□□□□□ -1.9
RXT3YDL076C MRPL20P22354 195 aaPredicted RBP3.18□□□□□ -1.9
RXT3YDL076C LDS1P31379 325 aa3.18□□□□□ -1.9
RXT3YDL076C YEA6P39953 335 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms