RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	ORM1	P53224	222 aa		-0.33	□□□□□ -2.46
HMRA2	YCR096C	YIP3	P53633	176 aa		-0.33	□□□□□ -2.46
HMRA2	YCR096C	YET3	Q07451	203 aa		-0.33	□□□□□ -2.46
HMRA2	YCR096C	FIT3	Q08907	204 aa		-0.33	□□□□□ -2.46
HMRA2	YCR096C	YLR046C	Q12253	270 aa		-0.33	□□□□□ -2.46
HMRA2	YCR096C	ATP5	P09457	212 aa		-0.34	□□□□□ -2.46
HMRA2	YCR096C	YGL041W-A	P0C5N3	154 aa		-0.34	□□□□□ -2.46
HMRA2	YCR096C	FAS2	P19097	1887 aa	Known RBP	-0.34	□□□□□ -2.46
HMRA2	YCR096C	SRP102	P36057	244 aa	Predicted RBP	-0.34	□□□□□ -2.46
HMRA2	YCR096C	FES1	P38260	290 aa		-0.34	□□□□□ -2.46
HMRA2	YCR096C	RPS29B	P41058	56 aa	Known RBP	-0.34	□□□□□ -2.46
HMRA2	YCR096C	YMR122C	Q03879	124 aa		-0.34	□□□□□ -2.46
HMRA2	YCR096C	YPR153W	Q06537	140 aa		-0.34	□□□□□ -2.46
HMRA2	YCR096C	GPI11	Q06636	219 aa		-0.34	□□□□□ -2.46
HMRA2	YCR096C	RFU1	Q08003	200 aa		-0.34	□□□□□ -2.46
HMRA2	YCR096C	MYO1	P08964	1928 aa		-0.34	□□□□□ -2.46
HMRA2	YCR096C	RAD51	P25454	400 aa		-0.35	□□□□□ -2.47
HMRA2	YCR096C	ATP7	P30902	174 aa		-0.35	□□□□□ -2.47
HMRA2	YCR096C	SRP21	P32342	167 aa		-0.35	□□□□□ -2.47
HMRA2	YCR096C	CWC21	Q03375	135 aa	Known RBP	-0.35	□□□□□ -2.47
HMRA2	YCR096C	GRX3	Q03835	250 aa		-0.36	□□□□□ -2.47
HMRA2	YCR096C	YMR321C	Q04898	105 aa		-0.36	□□□□□ -2.47
HMRA2	YCR096C	YLR050C	Q12155	161 aa	Known RBP	-0.36	□□□□□ -2.47
HMRA2	YCR096C	BRR2	P32639	2163 aa	Known RBP	-0.36	□□□□□ -2.47
HMRA2	YCR096C	COX5B	P00425	151 aa		-0.37	□□□□□ -2.47
HMRA2	YCR096C	NHP6A	P11632	93 aa	Known RBP	-0.37	□□□□□ -2.47
HMRA2	YCR096C	SRP14	P38985	146 aa		-0.37	□□□□□ -2.47
HMRA2	YCR096C	FIP1	P45976	327 aa		-0.37	□□□□□ -2.47
HMRA2	YCR096C	YGL193C	P53097	103 aa		-0.37	□□□□□ -2.47
HMRA2	YCR096C	EST3	Q03096	181 aa		-0.37	□□□□□ -2.47
HMRA2	YCR096C	IRC21	Q04772	201 aa		-0.37	□□□□□ -2.47
HMRA2	YCR096C	TY1B-H	O13535	1793 aa		-0.37	□□□□□ -2.47
HMRA2	YCR096C	TY4B-J	P47024	1803 aa		-0.38	□□□□□ -2.47
HMRA2	YCR096C	CMD1	P06787	147 aa	Known RBP	-0.38	□□□□□ -2.47
HMRA2	YCR096C	UBI4	P0CG63	381 aa	Known RBP	-0.38	□□□□□ -2.47
HMRA2	YCR096C	PHO13	P19881	312 aa		-0.38	□□□□□ -2.47
HMRA2	YCR096C	PEX34	P25584	144 aa		-0.38	□□□□□ -2.47
HMRA2	YCR096C	AIM4	P38305	123 aa	Predicted RBP	-0.38	□□□□□ -2.47
HMRA2	YCR096C	YJL218W	P40892	196 aa	Known RBP	-0.38	□□□□□ -2.47
HMRA2	YCR096C	LST8	P41318	303 aa		-0.38	□□□□□ -2.47
HMRA2	YCR096C	YGL101W	P53144	215 aa		-0.38	□□□□□ -2.47
HMRA2	YCR096C	COA4	Q05809	96 aa		-0.38	□□□□□ -2.47
HMRA2	YCR096C	COA6	Q3E846	104 aa		-0.38	□□□□□ -2.47
HMRA2	YCR096C	SEC16	P48415	2195 aa	Known RBP	-0.39	□□□□□ -2.47
HMRA2	YCR096C	AUA1	P32450	94 aa		-0.39	□□□□□ -2.47
HMRA2	YCR096C	YBR013C	P38215	129 aa		-0.39	□□□□□ -2.47
HMRA2	YCR096C	SEC72	P39742	193 aa	Known RBP	-0.39	□□□□□ -2.47
HMRA2	YCR096C	YNL140C	P53910	189 aa		-0.39	□□□□□ -2.47
HMRA2	YCR096C	LSM3	P57743	89 aa	Known RBP	-0.39	□□□□□ -2.47
HMRA2	YCR096C	PLP1	Q04004	230 aa		-0.39	□□□□□ -2.47
HMRA2	YCR096C	MHF1	Q3E835	90 aa		-0.39	□□□□□ -2.47
HMRA2	YCR096C	RPL40A	P0CH08	128 aa	Known RBP	-0.4	□□□□□ -2.47
HMRA2	YCR096C	RPL40B	P0CH09	128 aa	Known RBP	-0.4	□□□□□ -2.47
HMRA2	YCR096C	RPL30	P14120	105 aa	Known RBP	-0.4	□□□□□ -2.47
HMRA2	YCR096C	YPR202W	Q08993	238 aa		-0.4	□□□□□ -2.47
HMRA2	YCR096C	YRF1-3	P0CX14	1859 aa		-0.4	□□□□□ -2.47
HMRA2	YCR096C	YRF1-7	P0CX15	1859 aa		-0.4	□□□□□ -2.47
HMRA2	YCR096C	RPL35A	P0CX84	120 aa	Known RBP	-0.41	□□□□□ -2.48
HMRA2	YCR096C	RPL35B	P0CX85	120 aa	Known RBP	-0.41	□□□□□ -2.48
HMRA2	YCR096C	DDR48	P18899	430 aa	Known RBP	-0.41	□□□□□ -2.48
HMRA2	YCR096C	SRL3	P36167	246 aa		-0.41	□□□□□ -2.48
HMRA2	YCR096C	IPI1	P38803	334 aa	Predicted RBP	-0.41	□□□□□ -2.48
HMRA2	YCR096C	GPI2	P46961	280 aa		-0.41	□□□□□ -2.48
HMRA2	YCR096C	MIC27	P50945	234 aa		-0.41	□□□□□ -2.48
HMRA2	YCR096C	EMC4	P53073	190 aa		-0.41	□□□□□ -2.48
HMRA2	YCR096C	YNL019C	P53975	284 aa		-0.41	□□□□□ -2.48
HMRA2	YCR096C	TMA20	P89886	181 aa	Predicted RBP	-0.41	□□□□□ -2.48
HMRA2	YCR096C	NMT1	P14743	455 aa		-0.42	□□□□□ -2.48
HMRA2	YCR096C	FYV5	P25585	152 aa		-0.42	□□□□□ -2.48
HMRA2	YCR096C	MRPL24	P36525	258 aa	Predicted RBP	-0.42	□□□□□ -2.48
HMRA2	YCR096C	YER121W	P40076	114 aa		-0.42	□□□□□ -2.48
HMRA2	YCR096C	YLR194C	Q05777	254 aa		-0.42	□□□□□ -2.48
HMRA2	YCR096C	SCS22	Q6Q595	175 aa		-0.42	□□□□□ -2.48
HMRA2	YCR096C	POL2	P21951	2222 aa	Known RBP	-0.43	□□□□□ -2.48
HMRA2	YCR096C	YHR213W	P0CI67	198 aa		-0.43	□□□□□ -2.48
HMRA2	YCR096C	YER181C	P40097	107 aa		-0.43	□□□□□ -2.48
HMRA2	YCR096C	DLS1	P40366	167 aa		-0.43	□□□□□ -2.48
HMRA2	YCR096C	YCL001W-A	P87012	153 aa		-0.43	□□□□□ -2.48
HMRA2	YCR096C	RME1	P32338	300 aa	Known RBP	-0.44	□□□□□ -2.48
HMRA2	YCR096C	RDI1	Q12434	202 aa		-0.44	□□□□□ -2.48
HMRA2	YCR096C	HUT1	Q12520	339 aa		-0.44	□□□□□ -2.48
HMRA2	YCR096C	UTP11	P34247	250 aa	Predicted RBP	-0.45	□□□□□ -2.48
HMRA2	YCR096C	EGD2	P38879	174 aa	Known RBP	-0.45	□□□□□ -2.48
HMRA2	YCR096C	APQ12	P40532	138 aa		-0.45	□□□□□ -2.48
HMRA2	YCR096C	GIM3	P53900	129 aa		-0.45	□□□□□ -2.48
HMRA2	YCR096C	KTI11	Q3E840	82 aa		-0.45	□□□□□ -2.48
HMRA2	YCR096C	SAC3	P46674	1301 aa		-0.45	□□□□□ -2.48
HMRA2	YCR096C	YSF3	P0C074	85 aa	Predicted RBP	-0.46	□□□□□ -2.48
HMRA2	YCR096C	RPS1B	P23248	255 aa	Known RBP	-0.46	□□□□□ -2.48
HMRA2	YCR096C	POR2	P40478	281 aa		-0.46	□□□□□ -2.48
HMRA2	YCR096C	YFR035C	P43608	114 aa		-0.46	□□□□□ -2.48
HMRA2	YCR096C	RRT7	Q07829	113 aa		-0.46	□□□□□ -2.48
HMRA2	YCR096C	ANB1	P19211	157 aa		-0.47	□□□□□ -2.48
HMRA2	YCR096C	PHB1	P40961	287 aa		-0.47	□□□□□ -2.48
HMRA2	YCR096C	YJR128W	P47162	119 aa		-0.47	□□□□□ -2.48
HMRA2	YCR096C	ATP19	P81451	68 aa		-0.47	□□□□□ -2.48
HMRA2	YCR096C	SOM1	Q05676	74 aa		-0.47	□□□□□ -2.48
HMRA2	YCR096C	RTC6	O14464	93 aa		-0.48	□□□□□ -2.49
HMRA2	YCR096C	MRPL31	P14063	131 aa	Predicted RBP	-0.48	□□□□□ -2.49
HMRA2	YCR096C	FUN14	P18411	198 aa		-0.48	□□□□□ -2.49

Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms