RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W FPR2P32472 135 aa6.49□□□□□ -1.37
ABP1YCR088W YNL200CP40165 246 aaKnown RBP6.49□□□□□ -1.37
ABP1YCR088W BNA2P47125 453 aa6.49□□□□□ -1.37
ABP1YCR088W GIM5Q04493 163 aa6.49□□□□□ -1.37
ABP1YCR088W TIR1P10863 254 aa6.49□□□□□ -1.37
ABP1YCR088W HAP3P13434 144 aa6.49□□□□□ -1.37
ABP1YCR088W YKR045CP36138 183 aa6.49□□□□□ -1.37
ABP1YCR088W MOH1P38191 138 aa6.49□□□□□ -1.37
ABP1YCR088W CTR2P38865 189 aa6.49□□□□□ -1.37
ABP1YCR088W SSU72P53538 206 aaPredicted RBP6.49□□□□□ -1.37
ABP1YCR088W CRZ1P53968 678 aa6.49□□□□□ -1.37
ABP1YCR088W RKI1Q12189 258 aa6.49□□□□□ -1.37
ABP1YCR088W YDR215CQ12240 137 aa6.49□□□□□ -1.37
ABP1YCR088W RPS23AP0CX29 145 aaKnown RBP6.48□□□□□ -1.37
ABP1YCR088W RPS23BP0CX30 145 aa6.48□□□□□ -1.37
ABP1YCR088W ATP10P18496 279 aa6.48□□□□□ -1.37
ABP1YCR088W UTR5P32630 166 aa6.48□□□□□ -1.37
ABP1YCR088W ICS2P38284 255 aa6.48□□□□□ -1.37
ABP1YCR088W LST8P41318 303 aa6.48□□□□□ -1.37
ABP1YCR088W YDL183CP48569 320 aa6.48□□□□□ -1.37
ABP1YCR088W BRP1P53194 125 aa6.48□□□□□ -1.37
ABP1YCR088W YGR151CP53287 111 aa6.48□□□□□ -1.37
ABP1YCR088W NDE2Q07500 545 aa6.48□□□□□ -1.37
ABP1YCR088W PIN2Q12057 282 aa6.48□□□□□ -1.37
ABP1YCR088W RPL23AP0CX41 137 aaKnown RBP6.47□□□□□ -1.37
ABP1YCR088W RPL23BP0CX42 137 aaKnown RBP6.47□□□□□ -1.37
ABP1YCR088W SEC11P15367 167 aa6.47□□□□□ -1.37
ABP1YCR088W SFT2P38166 215 aa6.47□□□□□ -1.37
ABP1YCR088W YBL071CP38185 102 aa6.47□□□□□ -1.37
ABP1YCR088W MSC3Q05812 728 aa6.47□□□□□ -1.37
ABP1YCR088W PAU23Q07987 124 aa6.47□□□□□ -1.37
ABP1YCR088W PAU17Q12370 124 aa6.47□□□□□ -1.37
ABP1YCR088W ALG14P38242 237 aa6.46□□□□□ -1.37
ABP1YCR088W CNL1Q06333 122 aa6.46□□□□□ -1.37
ABP1YCR088W FSF1Q12029 327 aaKnown RBP6.46□□□□□ -1.37
ABP1YCR088W AYT1Q12226 474 aa6.46□□□□□ -1.37
ABP1YCR088W MRPL31P14063 131 aaPredicted RBP6.46□□□□□ -1.38
ABP1YCR088W HAC1P41546 238 aa6.46□□□□□ -1.38
ABP1YCR088W GZF3P42944 551 aaKnown RBP6.46□□□□□ -1.38
ABP1YCR088W YFR045WP43617 309 aa6.46□□□□□ -1.38
ABP1YCR088W YGL230CP53074 147 aa6.46□□□□□ -1.38
ABP1YCR088W SED1Q01589 338 aa6.46□□□□□ -1.38
ABP1YCR088W ARC18Q05933 178 aaKnown RBP6.46□□□□□ -1.38
ABP1YCR088W YPL162CQ12042 273 aa6.46□□□□□ -1.38
ABP1YCR088W YBR220CP38318 560 aa6.45□□□□□ -1.38
ABP1YCR088W YMR141CP40211 102 aa6.45□□□□□ -1.38
ABP1YCR088W YJL213WP40896 331 aa6.45□□□□□ -1.38
ABP1YCR088W MRX11Q03079 207 aa6.45□□□□□ -1.38
ABP1YCR088W MET32Q12041 191 aa6.45□□□□□ -1.38
ABP1YCR088W MRS1P07266 363 aa6.44□□□□□ -1.38
ABP1YCR088W RPI1P23250 407 aaKnown RBP6.44□□□□□ -1.38
ABP1YCR088W MTR2P34232 184 aaKnown RBP6.44□□□□□ -1.38
ABP1YCR088W YPT10P38146 199 aa6.44□□□□□ -1.38
ABP1YCR088W YGL118CP53132 145 aa6.44□□□□□ -1.38
ABP1YCR088W HST4P53688 370 aa6.44□□□□□ -1.38
ABP1YCR088W SWT21P53873 357 aaPredicted RBP6.44□□□□□ -1.38
ABP1YCR088W TVP18Q04767 167 aa6.44□□□□□ -1.38
ABP1YCR088W WIP1Q2V2P8 89 aa6.44□□□□□ -1.38
ABP1YCR088W SOR1P35497 357 aaKnown RBP6.44□□□□□ -1.38
ABP1YCR088W YHL037CP38733 133 aa6.44□□□□□ -1.38
ABP1YCR088W YNL234WP53857 426 aa6.44□□□□□ -1.38
ABP1YCR088W CWC27Q02770 301 aa6.44□□□□□ -1.38
ABP1YCR088W SOR2Q07786 357 aa6.44□□□□□ -1.38
ABP1YCR088W ATO3Q12359 275 aa6.44□□□□□ -1.38
ABP1YCR088W ADH5P38113 351 aaKnown RBP6.43□□□□□ -1.38
ABP1YCR088W SEC72P39742 193 aaKnown RBP6.43□□□□□ -1.38
ABP1YCR088W RXT3Q07458 294 aa6.43□□□□□ -1.38
ABP1YCR088W MSL1P40567 111 aaPredicted RBP6.42□□□□□ -1.38
ABP1YCR088W POP3P53833 195 aaPredicted RBP6.42□□□□□ -1.38
ABP1YCR088W TIM18Q08749 192 aa6.42□□□□□ -1.38
ABP1YCR088W TOR2P32600 2474 aaKnown RBP6.42□□□□□ -1.38
ABP1YCR088W YHR213WP0CI67 198 aa6.41□□□□□ -1.38
ABP1YCR088W DAL80P26343 269 aa6.41□□□□□ -1.38
ABP1YCR088W YPS1P32329 569 aa6.41□□□□□ -1.38
ABP1YCR088W ECM14P38836 430 aa6.41□□□□□ -1.38
ABP1YCR088W YDR366CP87287 132 aa6.41□□□□□ -1.38
ABP1YCR088W ATG33Q06485 197 aa6.41□□□□□ -1.38
ABP1YCR088W MSL5Q12186 476 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
ABP1YCR088W COX2P00410 251 aa6.41□□□□□ -1.38
ABP1YCR088W YPR170W-BP0C5R9 85 aa6.41□□□□□ -1.38
ABP1YCR088W MDM10P18409 493 aa6.41□□□□□ -1.38
ABP1YCR088W GLE2P40066 365 aa6.41□□□□□ -1.38
ABP1YCR088W THG1P53215 237 aaKnown RBP6.41□□□□□ -1.38
ABP1YCR088W YNR064CP53750 290 aa6.41□□□□□ -1.38
ABP1YCR088W DAD4P69851 72 aa6.41□□□□□ -1.38
ABP1YCR088W MIX17Q03667 156 aa6.41□□□□□ -1.38
ABP1YCR088W UPS3Q04006 179 aa6.41□□□□□ -1.38
ABP1YCR088W DPP1Q05521 289 aa6.41□□□□□ -1.38
ABP1YCR088W HTB2P02294 131 aa6.4□□□□□ -1.38
ABP1YCR088W ERS1P17261 260 aa6.4□□□□□ -1.38
ABP1YCR088W YPI1P43587 155 aa6.4□□□□□ -1.38
ABP1YCR088W GRH1Q04410 372 aaKnown RBP6.4□□□□□ -1.38
ABP1YCR088W IRC23Q08416 157 aa6.4□□□□□ -1.38
ABP1YCR088W YDL009CQ12210 107 aa6.4□□□□□ -1.38
ABP1YCR088W ADE8P04161 214 aa6.39□□□□□ -1.39
ABP1YCR088W CPT1P17898 393 aa6.39□□□□□ -1.39
ABP1YCR088W YCR007CP25354 239 aa6.39□□□□□ -1.39
ABP1YCR088W TIR2P33890 251 aa6.39□□□□□ -1.39
ABP1YCR088W PET8P38921 284 aa6.39□□□□□ -1.39
ABP1YCR088W IMP2P46972 177 aa6.39□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms