RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene LDB7, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDB7	YBL006C	FCF2	Q12035	217 aa	Predicted RBP	4.98	□□□□□ -1.61
LDB7	YBL006C	ERV2	Q12284	196 aa		4.98	□□□□□ -1.61
LDB7	YBL006C	SAR1	P20606	190 aa	Known RBP	4.97	□□□□□ -1.61
LDB7	YBL006C	RPS2	P25443	254 aa	Known RBP	4.97	□□□□□ -1.61
LDB7	YBL006C	TAD2	P47058	250 aa		4.97	□□□□□ -1.61
LDB7	YBL006C	MRPL50	P53724	139 aa		4.97	□□□□□ -1.61
LDB7	YBL006C	ANT1	Q06497	328 aa		4.97	□□□□□ -1.61
LDB7	YBL006C	ATX2	Q12067	313 aa		4.97	□□□□□ -1.61
LDB7	YBL006C	YOL085C	Q99345	113 aa		4.97	□□□□□ -1.61
LDB7	YBL006C	HSP12	P22943	109 aa	Known RBP	4.96	□□□□□ -1.62
LDB7	YBL006C	VMA16	P23968	213 aa		4.96	□□□□□ -1.62
LDB7	YBL006C	SPI1	P40092	148 aa		4.96	□□□□□ -1.62
LDB7	YBL006C	VHS2	P40463	436 aa		4.96	□□□□□ -1.62
LDB7	YBL006C	YJR096W	P47137	282 aa		4.96	□□□□□ -1.62
LDB7	YBL006C	RIB4	P50861	169 aa	Predicted RBP	4.96	□□□□□ -1.62
LDB7	YBL006C	YNR066C	P53752	436 aa		4.96	□□□□□ -1.62
LDB7	YBL006C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	RIP-Chip
LDB7	YBL006C	MRPS17	Q03246	237 aa	Predicted RBP	4.96	□□□□□ -1.62
LDB7	YBL006C	ATC1	Q04005	294 aa		4.96	□□□□□ -1.62
LDB7	YBL006C	UBI4	P0CG63	381 aa	Known RBP	4.95	□□□□□ -1.62
LDB7	YBL006C	YGL194C-A	Q2V2P6	80 aa		4.95	□□□□□ -1.62
LDB7	YBL006C	MRS1	P07266	363 aa		4.94	□□□□□ -1.62
LDB7	YBL006C	MRP2	P10663	115 aa	Predicted RBP	4.94	□□□□□ -1.62
LDB7	YBL006C	ASP1	P38986	381 aa	Predicted RBP	4.94	□□□□□ -1.62
LDB7	YBL006C	TMA23	Q03525	211 aa		4.94	□□□□□ -1.62
LDB7	YBL006C	HTB2	P02294	131 aa		4.93	□□□□□ -1.62
LDB7	YBL006C	VAR1	P02381	398 aa		4.93	□□□□□ -1.62
LDB7	YBL006C	MAG1	P22134	296 aa	Known RBP	4.93	□□□□□ -1.62
LDB7	YBL006C	MRPL20	P22354	195 aa	Predicted RBP	4.93	□□□□□ -1.62
LDB7	YBL006C	MRPL4	P36517	319 aa		4.93	□□□□□ -1.62
LDB7	YBL006C	TRS20	P38334	175 aa		4.93	□□□□□ -1.62
LDB7	YBL006C	YBR292C	P38357	123 aa		4.93	□□□□□ -1.62
LDB7	YBL006C	GCV3	P39726	170 aa	Predicted RBP	4.93	□□□□□ -1.62
LDB7	YBL006C	YOR015W	Q12169	119 aa		4.93	□□□□□ -1.62
LDB7	YBL006C	TMA17	Q12513	150 aa		4.93	□□□□□ -1.62
LDB7	YBL006C	RPS0A	P32905	252 aa	Known RBP	4.92	□□□□□ -1.62
LDB7	YBL006C	TOM7	P53507	60 aa		4.92	□□□□□ -1.62
LDB7	YBL006C	CAF40	P53829	373 aa		4.92	□□□□□ -1.62
LDB7	YBL006C	RAV2	Q03956	351 aa		4.92	□□□□□ -1.62
LDB7	YBL006C	YCR075W-A	Q3E830	75 aa		4.92	□□□□□ -1.62
LDB7	YBL006C	CPT1	P17898	393 aa		4.91	□□□□□ -1.62
LDB7	YBL006C	ACP1	P32463	125 aa		4.91	□□□□□ -1.62
LDB7	YBL006C	YMR141C	P40211	102 aa		4.91	□□□□□ -1.62
LDB7	YBL006C	HUA1	P40325	198 aa		4.91	□□□□□ -1.62
LDB7	YBL006C	GAT4	P40569	121 aa		4.91	□□□□□ -1.62
LDB7	YBL006C	SRB7	P47822	140 aa		4.91	□□□□□ -1.62
LDB7	YBL006C	YPS5	P53057	165 aa		4.91	□□□□□ -1.62
LDB7	YBL006C	SNO1	Q03144	224 aa		4.91	□□□□□ -1.62
LDB7	YBL006C	SDO1	Q07953	250 aa	Known RBP	4.91	□□□□□ -1.62
LDB7	YBL006C	NNK1	P36003	928 aa		4.9	□□□□□ -1.63
LDB7	YBL006C	LOC1	P43586	204 aa	Predicted RBP	4.9	□□□□□ -1.63
LDB7	YBL006C	YBR126W-A	Q8TGU7	68 aa		4.9	□□□□□ -1.63
LDB7	YBL006C	YHR173C	P38864	112 aa		4.89	□□□□□ -1.63
LDB7	YBL006C	ADD37	Q03233	198 aa		4.89	□□□□□ -1.63
LDB7	YBL006C	YPR195C	Q06594	109 aa		4.89	□□□□□ -1.63
LDB7	YBL006C	RNA15	P25299	296 aa	Predicted RBP	4.88	□□□□□ -1.63
LDB7	YBL006C	SMD3	P43321	101 aa	Known RBP	4.88	□□□□□ -1.63
LDB7	YBL006C	JAC1	P53193	184 aa		4.88	□□□□□ -1.63
LDB7	YBL006C	YMR253C	Q04835	414 aa		4.88	□□□□□ -1.63
LDB7	YBL006C	YLR125W	Q12138	136 aa		4.88	□□□□□ -1.63
LDB7	YBL006C	RPL31B	P0C2H9	113 aa	Known RBP	4.87	□□□□□ -1.63
LDB7	YBL006C	ELF1	P36053	145 aa		4.87	□□□□□ -1.63
LDB7	YBL006C	AME1	P38313	324 aa		4.87	□□□□□ -1.63
LDB7	YBL006C	SIT1	P39980	628 aa		4.87	□□□□□ -1.63
LDB7	YBL006C	RRT13	P40042	185 aa		4.87	□□□□□ -1.63
LDB7	YBL006C	ATP23	P53722	227 aa		4.87	□□□□□ -1.63
LDB7	YBL006C	COX19	Q3E731	98 aa		4.87	□□□□□ -1.63
LDB7	YBL006C	YLR302C	O13544	120 aa		4.86	□□□□□ -1.63
LDB7	YBL006C	Q0255	P03881	472 aa		4.86	□□□□□ -1.63
LDB7	YBL006C	YCL001W-A	P87012	153 aa		4.86	□□□□□ -1.63
LDB7	YBL006C	YGR240C-A	Q3E786	66 aa		4.86	□□□□□ -1.63
LDB7	YBL006C	YLR342W-A	Q3E810	57 aa		4.86	□□□□□ -1.63
LDB7	YBL006C	RPL16B	P26785	198 aa	Known RBP	4.85	□□□□□ -1.63
LDB7	YBL006C	HMX1	P32339	317 aa		4.85	□□□□□ -1.63
LDB7	YBL006C	RPL14A	P36105	138 aa	Known RBP	4.85	□□□□□ -1.63
LDB7	YBL006C	RPL14B	P38754	138 aa	Known RBP	4.85	□□□□□ -1.63
LDB7	YBL006C	IRC22	P40006	225 aa		4.85	□□□□□ -1.63
LDB7	YBL006C	YNL200C	P40165	246 aa	Known RBP	4.85	□□□□□ -1.63
LDB7	YBL006C	EMC5	P40540	141 aa		4.85	□□□□□ -1.63
LDB7	YBL006C	YCH1	P42937	148 aa		4.85	□□□□□ -1.63
LDB7	YBL006C	BRP1	P53194	125 aa		4.85	□□□□□ -1.63
LDB7	YBL006C	PAU4	P53427	120 aa		4.85	□□□□□ -1.63
LDB7	YBL006C	YDR366C	P87287	132 aa		4.85	□□□□□ -1.63
LDB7	YBL006C	CRC1	Q12289	327 aa		4.85	□□□□□ -1.63
LDB7	YBL006C	SME1	Q12330	94 aa	Predicted RBP	4.85	□□□□□ -1.63
LDB7	YBL006C	KRE9	P39005	276 aa		4.84	□□□□□ -1.63
LDB7	YBL006C	SPC25	P40014	221 aa		4.84	□□□□□ -1.63
LDB7	YBL006C	YIL163C	P40448	117 aa		4.84	□□□□□ -1.63
LDB7	YBL006C	KEG1	P43614	200 aa		4.84	□□□□□ -1.63
LDB7	YBL006C	DAD4	P69851	72 aa		4.84	□□□□□ -1.63
LDB7	YBL006C	COA4	Q05809	96 aa		4.84	□□□□□ -1.63
LDB7	YBL006C	YBR200W-A	Q3E755	54 aa		4.84	□□□□□ -1.63
LDB7	YBL006C	AGA1	P32323	725 aa		4.83	□□□□□ -1.64
LDB7	YBL006C	YPT10	P38146	199 aa		4.83	□□□□□ -1.64
LDB7	YBL006C	PHO23	P50947	330 aa		4.83	□□□□□ -1.64
LDB7	YBL006C	DAD1	Q12248	94 aa		4.83	□□□□□ -1.64
LDB7	YBL006C	UTP23	Q12339	254 aa	Known RBP	4.83	□□□□□ -1.64
LDB7	YBL006C	PAU1	P0CE88	120 aa		4.82	□□□□□ -1.64
LDB7	YBL006C	PAU14	P0CE89	120 aa		4.82	□□□□□ -1.64
LDB7	YBL006C	PAU6	P0CE90	120 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 38 ms