RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 AMFRQ9UKV5 643 aa18.64■□□□□ 0.57
PHGDH-232ENST00000641947 VWA8A3KMH1 1905 aa18.64■□□□□ 0.57
PHGDH-232ENST00000641947 I3L4J1 428 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 TULP2O00295 520 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 ENPP3O14638 875 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 CYP2C18P33260 490 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 GNL1P36915 607 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-232ENST00000641947 AARSP49588 968 aaKnown RBP eCLIP18.63■□□□□ 0.57
PHGDH-232ENST00000641947 TUSC3Q13454 348 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 ELF2Q15723 593 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 PAN2Q504Q3 1202 aaKnown RBP18.63■□□□□ 0.57
PHGDH-232ENST00000641947 PKDCCQ504Y2 493 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 LIN9Q5TKA1 542 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 KIAA0319Q5VV43 1072 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 NOA1Q8NC60 698 aaKnown RBP18.63■□□□□ 0.57
PHGDH-232ENST00000641947 KRT35Q92764 455 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 CD101Q93033 1021 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 FTHL17Q9BXU8 183 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 KIAA1257Q9ULG3 409 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 PTPRDP23468 1912 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 EFCAB8A8MWE9 144 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 KCNK3O14649 394 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 ATP2C2O75185 946 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 ERBB2P04626 1255 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 ITGB1P05556 798 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 CALB1P05937 261 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 CCDC130P13994 396 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 RPL9P32969 192 aaKnown RBP18.63■□□□□ 0.57
PHGDH-232ENST00000641947 GJA8P48165 433 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 RPL7AP62424 266 aaKnown RBP18.63■□□□□ 0.57
PHGDH-232ENST00000641947 PDCLQ13371 301 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 TIGD5Q53EQ6 642 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 PPP1R15BQ5SWA1 713 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 DAB2IPQ5VWQ8 1189 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 PPP1R2P3Q6NXS1 205 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 ERICH1Q86X53 443 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 ZNF280BQ86YH2 543 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 CRYBG2Q8N1P7 616 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 CALR3Q96L12 384 aaKnown RBP18.63■□□□□ 0.57
PHGDH-232ENST00000641947 EPC1Q9H2F5 836 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 SNX25Q9H3E2 840 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 PCDH10Q9P2E7 1040 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 CEP83Q9Y592 693 aa18.63■□□□□ 0.57
PHGDH-232ENST00000641947 TIMM13Q9Y5L4 95 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-232ENST00000641947 LAMA2P24043 3122 aaKnown RBP18.62■□□□□ 0.57
PHGDH-232ENST00000641947 NLRC5Q86WI3 1866 aa18.62■□□□□ 0.57
PHGDH-232ENST00000641947 LTBP2Q14767 1821 aa18.62■□□□□ 0.57
PHGDH-232ENST00000641947 GABRDO14764 452 aa18.62■□□□□ 0.57
PHGDH-232ENST00000641947 DDHD2O94830 711 aa18.62■□□□□ 0.57
PHGDH-232ENST00000641947 ACAT1P24752 427 aaKnown RBP18.62■□□□□ 0.57
PHGDH-232ENST00000641947 PSMC1P62191 440 aaKnown RBP18.62■□□□□ 0.57
PHGDH-232ENST00000641947 C1orf53Q5VUE5 145 aa18.62■□□□□ 0.57
PHGDH-232ENST00000641947 HASPINQ8TF76 798 aa18.62■□□□□ 0.57
PHGDH-232ENST00000641947 ALG3Q92685 438 aa18.62■□□□□ 0.57
PHGDH-232ENST00000641947 VWCEQ96DN2 955 aa18.62■□□□□ 0.57
PHGDH-232ENST00000641947 TOX2Q96NM4 488 aa18.62■□□□□ 0.57
PHGDH-232ENST00000641947 TBX21Q9UL17 535 aa18.62■□□□□ 0.57
PHGDH-232ENST00000641947 CTAGE15A4D2H0 777 aa18.61■□□□□ 0.57
PHGDH-232ENST00000641947 CXCL10P02778 98 aa18.61■□□□□ 0.57
PHGDH-232ENST00000641947 CTAGE8P0CG41 777 aa18.61■□□□□ 0.57
PHGDH-232ENST00000641947 TKTP29401 623 aaKnown RBP18.61■□□□□ 0.57
PHGDH-232ENST00000641947 BRCC3P46736 316 aa18.61■□□□□ 0.57
PHGDH-232ENST00000641947 GATMP50440 423 aa18.61■□□□□ 0.57
PHGDH-232ENST00000641947 ZNF252P-AS1Q0IIN9 211 aa18.61■□□□□ 0.57
PHGDH-232ENST00000641947 TEX35Q5T0J7 233 aa18.61■□□□□ 0.57
PHGDH-232ENST00000641947 ARHGAP17Q68EM7 881 aa18.61■□□□□ 0.57
PHGDH-232ENST00000641947 GLB1LQ6UWU2 654 aa18.61■□□□□ 0.57
PHGDH-232ENST00000641947 ZNF572Q7Z3I7 529 aaPredicted RBP18.61■□□□□ 0.57
PHGDH-232ENST00000641947 CTAGE6Q86UF2 777 aa18.61■□□□□ 0.57
PHGDH-232ENST00000641947 XYLT1Q86Y38 959 aa18.61■□□□□ 0.57
PHGDH-232ENST00000641947 CTAGE4Q8IX94 777 aa18.61■□□□□ 0.57
PHGDH-232ENST00000641947 PARVAQ9NVD7 372 aa18.61■□□□□ 0.57
PHGDH-232ENST00000641947 TMEM161AQ9NX61 479 aa18.61■□□□□ 0.57
PHGDH-232ENST00000641947 ATP11BQ9Y2G3 1177 aa18.61■□□□□ 0.57
PHGDH-232ENST00000641947 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.6■□□□□ 0.57
PHGDH-232ENST00000641947 DCDC2CA8MYV0 355 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 DYNC1I1O14576 645 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 CDR1P51861 262 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 OGDHQ02218 1023 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 DSC1Q08554 894 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 C2orf54Q08AI8 447 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 CRIPAKQ8N1N5 446 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 SEPT8Q92599 483 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 TBC1D13Q9NVG8 400 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 SCINQ9Y6U3 715 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 ALPK3Q96L96 1907 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 PIK3R2O00459 728 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 GABBR2O75899 941 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 B3GAT3O94766 335 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 GABRB2P47870 512 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 PEX5P50542 639 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 CKAP4Q07065 602 aaKnown RBP18.6■□□□□ 0.57
PHGDH-232ENST00000641947 LRRC26Q2I0M4 334 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 NOMO2Q5JPE7 1267 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 DNAJC24Q6P3W2 148 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 DSTYKQ6XUX3 929 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 B3GALNT2Q8NCR0 500 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 C3orf20Q8ND61 904 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 FEZF2Q8TBJ5 459 aa18.6■□□□□ 0.57
PHGDH-232ENST00000641947 GOLGA1Q92805 767 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms