RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 TMX2-CTNND1H3BSU7 103 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 MPOP05164 745 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 EIF4BP23588 611 aaKnown RBP3.91□□□□□ -1.78
CCDC7-213ENST00000639290 CTSKP43235 329 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 NR1H3Q13133 447 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 TTF1Q15361 905 aaPredicted RBP3.91□□□□□ -1.78
CCDC7-213ENST00000639290 ARHGAP15Q53QZ3 475 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 UTP14CQ5TAP6 766 aaKnown RBP3.91□□□□□ -1.78
CCDC7-213ENST00000639290 TCTN3Q6NUS6 607 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 ZNF662Q6ZS27 426 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 TAS1R1Q7RTX1 841 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 KIAA0319LQ8IZA0 1049 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 TEX19Q8NA77 164 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 TPCN2Q8NHX9 752 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 C1orf216Q8TAB5 229 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 ZNF592Q92610 1267 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 SKA1Q96BD8 255 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 RSPRY1Q96DX4 576 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 SLC12A9Q9BXP2 914 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 PIH1D3Q9NQM4 214 aaKnown RBP3.91□□□□□ -1.78
CCDC7-213ENST00000639290 MTRRQ9UBK8 725 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 CCDC168Q8NDH2 2452 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 MYH7P12883 1935 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 SDK1Q7Z5N4 2213 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.91□□□□□ -1.78
CCDC7-213ENST00000639290 MEIS1O00470 390 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 SCAMP3O14828 347 aaKnown RBP3.91□□□□□ -1.78
CCDC7-213ENST00000639290 CYP26A1O43174 497 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 DDHD2O94830 711 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 CYP2D6P10635 497 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 DDX6P26196 483 aaKnown RBP eCLIP3.91□□□□□ -1.78
CCDC7-213ENST00000639290 TCF7P36402 384 aaPredicted RBP3.91□□□□□ -1.78
CCDC7-213ENST00000639290 TNFRSF4P43489 277 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 SEPT6Q14141 434 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 TPGS2Q68CL5 300 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 C14orf80Q86SX3 495 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 LNX1Q8TBB1 728 aaPredicted RBP3.91□□□□□ -1.78
CCDC7-213ENST00000639290 CHFRQ96EP1 664 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 ZSWIM3Q96MP5 696 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 EGFL7Q9UHF1 273 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 ADAM28Q9UKQ2 775 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 CELSR1Q9NYQ6 3014 aa3.91□□□□□ -1.78
CCDC7-213ENST00000639290 SCAMP1O15126 338 aa3.9□□□□□ -1.78
CCDC7-213ENST00000639290 HBP1O60381 514 aa3.9□□□□□ -1.78
CCDC7-213ENST00000639290 NOBOXO60393 691 aa3.9□□□□□ -1.78
CCDC7-213ENST00000639290 CSO75390 466 aaKnown RBP3.9□□□□□ -1.78
CCDC7-213ENST00000639290 IGLV3-19P01714 112 aa3.9□□□□□ -1.78
CCDC7-213ENST00000639290 IL4RP24394 825 aa3.9□□□□□ -1.78
CCDC7-213ENST00000639290 HARS2P49590 506 aaKnown RBP3.9□□□□□ -1.78
CCDC7-213ENST00000639290 TAGLNQ01995 201 aaKnown RBP3.9□□□□□ -1.78
CCDC7-213ENST00000639290 GRIK3Q13003 919 aa3.9□□□□□ -1.78
CCDC7-213ENST00000639290 PGM5Q15124 567 aa3.9□□□□□ -1.78
CCDC7-213ENST00000639290 MSS51Q4VC12 460 aa3.9□□□□□ -1.78
CCDC7-213ENST00000639290 KDM7AQ6ZMT4 941 aa3.9□□□□□ -1.78
CCDC7-213ENST00000639290 TRIM50Q86XT4 487 aa3.9□□□□□ -1.78
CCDC7-213ENST00000639290 RNF169Q8NCN4 708 aa3.9□□□□□ -1.78
CCDC7-213ENST00000639290 LRRN4Q8WUT4 740 aa3.9□□□□□ -1.78
CCDC7-213ENST00000639290 RLN3Q8WXF3 142 aa3.9□□□□□ -1.78
CCDC7-213ENST00000639290 CEP95Q96GE4 821 aa3.9□□□□□ -1.78
CCDC7-213ENST00000639290 ZNF512Q96ME7 567 aaPredicted RBP3.9□□□□□ -1.78
CCDC7-213ENST00000639290 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.9□□□□□ -1.78
CCDC7-213ENST00000639290 INO80BQ9C086 356 aaPredicted RBP3.9□□□□□ -1.78
CCDC7-213ENST00000639290 GSX1Q9H4S2 264 aaPredicted RBP3.9□□□□□ -1.78
CCDC7-213ENST00000639290 RSAD1Q9HA92 442 aa3.9□□□□□ -1.78
CCDC7-213ENST00000639290 HPS4Q9NQG7 708 aa3.9□□□□□ -1.78
CCDC7-213ENST00000639290 FCF1Q9Y324 198 aaKnown RBP3.9□□□□□ -1.78
CCDC7-213ENST00000639290 ASB3Q9Y575 518 aa3.9□□□□□ -1.78
CCDC7-213ENST00000639290 PCDHB1Q9Y5F3 818 aa3.9□□□□□ -1.78
CCDC7-213ENST00000639290 BSNQ9UPA5 3926 aa3.9□□□□□ -1.78
CCDC7-213ENST00000639290 ARID2Q68CP9 1835 aa3.9□□□□□ -1.78
CCDC7-213ENST00000639290 NIPBLQ6KC79 2804 aaeCLIP3.9□□□□□ -1.79
CCDC7-213ENST00000639290 TLDC2A0PJX2 215 aa3.9□□□□□ -1.79
CCDC7-213ENST00000639290 METTL12A8MUP2 240 aa3.9□□□□□ -1.79
CCDC7-213ENST00000639290 KDM4EB2RXH2 506 aaPredicted RBP3.9□□□□□ -1.79
CCDC7-213ENST00000639290 PRSS44E7EML9 344 aa3.9□□□□□ -1.79
CCDC7-213ENST00000639290 MAGEB2O15479 319 aa3.9□□□□□ -1.79
CCDC7-213ENST00000639290 TCEA3O75764 348 aa3.9□□□□□ -1.79
CCDC7-213ENST00000639290 WNT1P04628 370 aa3.9□□□□□ -1.79
CCDC7-213ENST00000639290 RARAP10276 462 aa3.9□□□□□ -1.79
CCDC7-213ENST00000639290 CCDC157Q569K6 752 aa3.9□□□□□ -1.79
CCDC7-213ENST00000639290 TSPYL6Q8N831 410 aa3.9□□□□□ -1.79
CCDC7-213ENST00000639290 EZH1Q92800 747 aaPredicted RBP3.9□□□□□ -1.79
CCDC7-213ENST00000639290 THAP11Q96EK4 314 aa3.9□□□□□ -1.79
CCDC7-213ENST00000639290 CORO1BQ9BR76 489 aa3.9□□□□□ -1.79
CCDC7-213ENST00000639290 SRRTQ9BXP5 876 aaKnown RBP3.9□□□□□ -1.79
CCDC7-213ENST00000639290 BACH2Q9BYV9 841 aa3.9□□□□□ -1.79
CCDC7-213ENST00000639290 LNPKQ9C0E8 428 aa3.9□□□□□ -1.79
CCDC7-213ENST00000639290 ERVMER34-1Q9H9K5 563 aa3.9□□□□□ -1.79
CCDC7-213ENST00000639290 MCCC2Q9HCC0 563 aa3.9□□□□□ -1.79
CCDC7-213ENST00000639290 FAM105AQ9NUU6 356 aa3.9□□□□□ -1.79
CCDC7-213ENST00000639290 COL20A1Q9P218 1284 aa3.9□□□□□ -1.79
CCDC7-213ENST00000639290 ARMCX1Q9P291 453 aa3.9□□□□□ -1.79
CCDC7-213ENST00000639290 TPX2Q9ULW0 747 aaKnown RBP3.9□□□□□ -1.79
CCDC7-213ENST00000639290 SLC27A5Q9Y2P5 690 aa3.9□□□□□ -1.79
CCDC7-213ENST00000639290 CCDC187A0A096LP49 1063 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 PRR19A6NJB7 356 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 RBAK-RBAKDNI3L0D1 243 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 FANCGO15287 622 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 OPA1O60313 960 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 ABLIM3O94929 683 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms