RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 C1RP00736 705 aa18.36■□□□□ 0.53
CLN6-218ENST00000637223 SLC9A1P19634 815 aa18.36■□□□□ 0.53
CLN6-218ENST00000637223 ELF1P32519 619 aa18.36■□□□□ 0.53
CLN6-218ENST00000637223 NDST1P52848 882 aa18.36■□□□□ 0.53
CLN6-218ENST00000637223 ORC1Q13415 861 aa18.36■□□□□ 0.53
CLN6-218ENST00000637223 CUL2Q13617 745 aa18.36■□□□□ 0.53
CLN6-218ENST00000637223 EXOC3L4Q17RC7 722 aa18.36■□□□□ 0.53
CLN6-218ENST00000637223 LIN9Q5TKA1 542 aa18.36■□□□□ 0.53
CLN6-218ENST00000637223 TPGS2Q68CL5 300 aa18.36■□□□□ 0.53
CLN6-218ENST00000637223 ARHGEF19Q8IW93 802 aa18.36■□□□□ 0.53
CLN6-218ENST00000637223 SLC7A14Q8TBB6 771 aa18.36■□□□□ 0.53
CLN6-218ENST00000637223 LPIN3Q9BQK8 851 aa18.36■□□□□ 0.53
CLN6-218ENST00000637223 PLEKHA4Q9H4M7 779 aa18.36■□□□□ 0.53
CLN6-218ENST00000637223 CYP4F11Q9HBI6 524 aa18.36■□□□□ 0.53
CLN6-218ENST00000637223 DPP7Q9UHL4 492 aa18.36■□□□□ 0.53
CLN6-218ENST00000637223 GTF3C4Q9UKN8 822 aa18.36■□□□□ 0.53
CLN6-218ENST00000637223 CDH9Q9ULB4 789 aa18.36■□□□□ 0.53
CLN6-218ENST00000637223 MYBPHLA2RUH7 354 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 GTPBP10A4D1E9 387 aaKnown RBP18.35■□□□□ 0.53
CLN6-218ENST00000637223 PRRG1O14668 218 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 RFPL2O75678 378 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 C8AP07357 584 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 ATF2P15336 505 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 ZNF445P59923 1031 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 APBA1Q02410 837 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 RARS2Q5T160 578 aaKnown RBP18.35■□□□□ 0.53
CLN6-218ENST00000637223 SYCE2Q6PIF2 218 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 ELMSAN1Q6PJG2 1045 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 RRAGAQ7L523 313 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 PPM1KQ8N3J5 372 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 ATAD1Q8NBU5 361 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 FEZF2Q8TBJ5 459 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 HDAC7Q8WUI4 952 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 KAT5Q92993 513 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 MSLNLQ96KJ4 702 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 PKMYT1Q99640 499 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 CRISPLD1Q9H336 500 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 SFXN1Q9H9B4 322 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 CRTAC1Q9NQ79 661 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 ABI2Q9NYB9 513 aaPredicted RBP18.35■□□□□ 0.53
CLN6-218ENST00000637223 SLC27A5Q9Y2P5 690 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 BRWD1Q9NSI6 2320 aa18.35■□□□□ 0.53
CLN6-218ENST00000637223 GOLGA6L19H0YKK7 550 aa18.34■□□□□ 0.53
CLN6-218ENST00000637223 ALADP13716 330 aa18.34■□□□□ 0.53
CLN6-218ENST00000637223 PTPN1P18031 435 aaKnown RBP18.34■□□□□ 0.53
CLN6-218ENST00000637223 PON1P27169 355 aa18.34■□□□□ 0.53
CLN6-218ENST00000637223 TPM4P67936 248 aa18.34■□□□□ 0.53
CLN6-218ENST00000637223 INCA1Q0VD86 236 aa18.34■□□□□ 0.53
CLN6-218ENST00000637223 DUSP4Q13115 394 aa18.34■□□□□ 0.53
CLN6-218ENST00000637223 MDH1BQ5I0G3 518 aa18.34■□□□□ 0.53
CLN6-218ENST00000637223 PPM1LQ5SGD2 360 aa18.34■□□□□ 0.53
CLN6-218ENST00000637223 PHLDB3Q6NSJ2 640 aa18.34■□□□□ 0.53
CLN6-218ENST00000637223 TRIM65Q6PJ69 517 aa18.34■□□□□ 0.53
CLN6-218ENST00000637223 TMC5Q6UXY8 1006 aa18.34■□□□□ 0.53
CLN6-218ENST00000637223 APTXQ7Z2E3 356 aaKnown RBP18.34■□□□□ 0.53
CLN6-218ENST00000637223 ACOT1Q86TX2 421 aa18.34■□□□□ 0.53
CLN6-218ENST00000637223 TTC9BQ8N6N2 239 aa18.34■□□□□ 0.53
CLN6-218ENST00000637223 MYLPFQ96A32 169 aa18.34■□□□□ 0.53
CLN6-218ENST00000637223 FAXDC2Q96IV6 333 aa18.34■□□□□ 0.53
CLN6-218ENST00000637223 TWNKQ96RR1 684 aa18.34■□□□□ 0.53
CLN6-218ENST00000637223 CISHQ9NSE2 258 aa18.34■□□□□ 0.53
CLN6-218ENST00000637223 CD207Q9UJ71 328 aa18.34■□□□□ 0.53
CLN6-218ENST00000637223 CILPO75339 1184 aa18.33■□□□□ 0.52
CLN6-218ENST00000637223 ZMYND10O75800 440 aa18.33■□□□□ 0.52
CLN6-218ENST00000637223 HOXB8P17481 243 aaPredicted RBP18.33■□□□□ 0.52
CLN6-218ENST00000637223 TBXAS1P24557 533 aaPredicted RBP18.33■□□□□ 0.52
CLN6-218ENST00000637223 KCNMA1Q12791 1236 aa18.33■□□□□ 0.52
CLN6-218ENST00000637223 NFE2Q16621 373 aaPredicted RBP18.33■□□□□ 0.52
CLN6-218ENST00000637223 ZNF394Q53GI3 561 aa18.33■□□□□ 0.52
CLN6-218ENST00000637223 FKBP15Q5T1M5 1219 aa18.33■□□□□ 0.52
CLN6-218ENST00000637223 FAM171BQ6P995 826 aa18.33■□□□□ 0.52
CLN6-218ENST00000637223 GJB7Q6PEY0 223 aa18.33■□□□□ 0.52
CLN6-218ENST00000637223 CCDC149Q6ZUS6 474 aa18.33■□□□□ 0.52
CLN6-218ENST00000637223 UNC93AQ86WB7 457 aa18.33■□□□□ 0.52
CLN6-218ENST00000637223 TCEAL8Q8IYN2 117 aa18.33■□□□□ 0.52
CLN6-218ENST00000637223 B3GALNT2Q8NCR0 500 aa18.33■□□□□ 0.52
CLN6-218ENST00000637223 RNF214Q8ND24 703 aa18.33■□□□□ 0.52
CLN6-218ENST00000637223 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.33■□□□□ 0.52
CLN6-218ENST00000637223 CDH22Q9UJ99 828 aa18.33■□□□□ 0.52
CLN6-218ENST00000637223 PCDHB5Q9Y5E4 795 aa18.33■□□□□ 0.52
CLN6-218ENST00000637223 PLXNA3P51805 1871 aa18.33■□□□□ 0.52
CLN6-218ENST00000637223 CCDC195A0A1B0GUA6 201 aa18.32■□□□□ 0.52
CLN6-218ENST00000637223 LRRC10BA6NIK2 292 aa18.32■□□□□ 0.52
CLN6-218ENST00000637223 LGALS16A8MUM7 142 aa18.32■□□□□ 0.52
CLN6-218ENST00000637223 CCL16O15467 120 aa18.32■□□□□ 0.52
CLN6-218ENST00000637223 SOAT2O75908 522 aa18.32■□□□□ 0.52
CLN6-218ENST00000637223 IL9P15248 144 aa18.32■□□□□ 0.52
CLN6-218ENST00000637223 CYP27A1Q02318 531 aa18.32■□□□□ 0.52
CLN6-218ENST00000637223 SMARCB1Q12824 385 aa18.32■□□□□ 0.52
CLN6-218ENST00000637223 LEXMQ3ZCV2 418 aa18.32■□□□□ 0.52
CLN6-218ENST00000637223 SPATA2LQ8IUW3 424 aaPredicted RBP18.32■□□□□ 0.52
CLN6-218ENST00000637223 MYCBPAPQ8TBZ2 947 aa18.32■□□□□ 0.52
CLN6-218ENST00000637223 WHAMMQ8TF30 809 aa18.32■□□□□ 0.52
CLN6-218ENST00000637223 TNIP3Q96KP6 325 aa18.32■□□□□ 0.52
CLN6-218ENST00000637223 KREMEN1Q96MU8 473 aa18.32■□□□□ 0.52
CLN6-218ENST00000637223 SEPT5Q99719 369 aaPredicted RBP18.32■□□□□ 0.52
CLN6-218ENST00000637223 LSM14BQ9BX40 385 aaKnown RBP18.32■□□□□ 0.52
CLN6-218ENST00000637223 NT5C1AQ9BXI3 368 aa18.32■□□□□ 0.52
CLN6-218ENST00000637223 RHOBTB2Q9BYZ6 727 aa18.32■□□□□ 0.52
CLN6-218ENST00000637223 ELOVL4Q9GZR5 314 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms