RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-223	ENST00000637033	GNAZ	P19086	355 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	RFC1	P35251	1148 aa	Predicted RBP	13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	POLE2	P56282	527 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	MMRN1	Q13201	1228 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ACSBG2	Q5FVE4	666 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	JOSD2	Q8TAC2	188 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	IWS1	Q96ST2	819 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PDCD2L	Q9BRP1	358 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	WDR83	Q9BRX9	315 aa	Known RBP	13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	MTMR12	Q9C0I1	747 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	MANSC1	Q9H8J5	431 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	MRPL47	Q9HD33	250 aa	Known RBP	13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	NR2E3	Q9Y5X4	410 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	UBIAD1	Q9Y5Z9	338 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	KLRG2	A4D1S0	409 aa	Predicted RBP	13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SPDYE2B	A6NHP3	402 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TMEM63A	O94886	807 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	CYP1A1	P04798	512 aa	Predicted RBP	13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	KRT19	P08727	400 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	POTEJ	P0CG39	1038 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SPDYE6	P0CI01	402 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ACO1	P21399	889 aa	Known RBP	13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	CDH8	P55286	799 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PRKCE	Q02156	737 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	GCNT1	Q02742	428 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	THOC5	Q13769	683 aa	Known RBP	13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ZCCHC23	Q6ZST2	131 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ALLC	Q8N6M5	410 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	EFCAB3	Q8N7B9	438 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PHC3	Q8NDX5	983 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	EXD1	Q8NHP7	514 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	NRG4	Q8WWG1	115 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	CNKSR1	Q969H4	720 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PCDHA10	Q9Y5I2	948 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	WNK3	Q9BYP7	1800 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ATP2A1	O14983	1001 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	LPXN	O60711	386 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ENTPD3	O75355	529 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	MARK3	P27448	753 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	IL1R2	P27930	398 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ARFIP2	P53365	341 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	GEMIN4	P57678	1058 aa	Known RBP	13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	MYL6	P60660	151 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TFAM	Q00059	246 aa	Known RBP	13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	FAAP100	Q0VG06	881 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	BIRC2	Q13490	618 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	NCOA4	Q13772	614 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TCEAL1	Q15170	157 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SH3PXD2A	Q5TCZ1	1133 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SNX30	Q5VWJ9	437 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	C12orf56	Q8IXR9	622 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	C4orf19	Q8IY42	314 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	KATNAL2	Q8IYT4	538 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PDCD7	Q8N8D1	485 aa	Known RBP	13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	GRAMD1A	Q96CP6	724 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ATG4C	Q96DT6	458 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SERAC1	Q96JX3	654 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TTC1	Q99614	292 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TMEM120A	Q9BXJ8	343 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SYNC	Q9H7C4	482 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PARVA	Q9NVD7	372 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	XPO7	Q9UIA9	1087 aa	Known RBP	13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	RABGEF1	Q9UJ41	708 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033		H3BRJ5	948 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033		K7ERI5	159 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TYROBP	O43914	113 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	HAUS5	O94927	633 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	F7	P08709	466 aa	Predicted RBP	13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	MYL2	P10916	166 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	AMPD1	P23109	780 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PSMA2	P25787	234 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	RASSF2	P50749	326 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	HSD17B4	P51659	736 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	FSTL1	Q12841	308 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PRKG1	Q13976	671 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ZACN	Q401N2	412 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	AGGF1	Q8N302	714 aa	eCLIP	13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	FAM161B	Q96MY7	647 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ACAP3	Q96P50	834 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TSSK1B	Q9BXA7	367 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	FEM1B	Q9UK73	627 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SCN9A	Q15858	1988 aa		13.69	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PSTPIP1	O43586	416 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	UGT1A9	O60656	530 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	USP1	O94782	785 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	MT-ND3	P03897	115 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	C4BPA	P04003	597 aa	Known RBP	13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SRGAP2C	P0DJJ0	459 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TROVE2	P10155	538 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	KBTBD12	Q3ZCT8	623 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	C1orf228	Q6PIY5	440 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	USP37	Q86T82	979 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	RFX6	Q8HWS3	928 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PPM1N	Q8N819	430 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	BBOF1	Q8ND07	529 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SCG3	Q8WXD2	468 aa	Known RBP	13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	JDP2	Q8WYK2	163 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms