RNA–Protein interactions for RNA: ENST00000636367.1

SMARCA2-250, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-250ENST00000636367 MAGEB5Q9BZ81 275 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 DPH1Q9BZG8 443 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 WDCPQ9H6R7 721 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 AJAP1Q9UKB5 411 aaPredicted RBP8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 ANKRD26Q9UPS8 1709 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 MASP2O00187 686 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 F2RL2O00254 374 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 PTP4A3O75365 173 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 SEC24DO94855 1032 aaPredicted RBP8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 ESR1P03372 595 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 FAHP16930 419 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 ALOX12P18054 663 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 FUT4P22083 530 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 KCNJ5P48544 419 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 GPR15P49685 360 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 PPP2R5CQ13362 524 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 BECN1Q14457 450 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 PSMD6Q15008 389 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 UBE3CQ15386 1083 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 ZNF772Q68DY9 489 aaPredicted RBP8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 SLC30A6Q6NXT4 461 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 SLC22A25Q6T423 547 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 UNC5CLQ8IV45 518 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 CCDC117Q8IWD4 279 aaPredicted RBP8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 HERC5Q9UII4 1024 aaKnown RBP8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 ZNF112Q9UJU3 913 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 PCDHGB4Q9UN71 923 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 TBC1D30Q9Y2I9 924 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 SNX5Q9Y5X3 404 aa8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 MYBBP1AQ9BQG0 1328 aaKnown RBP8.34□□□□□ -1.07
SMARCA2-250ENST00000636367 LMO7Q8WWI1 1683 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 FAM170BA6NMN3 283 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 SMTNL1A8MU46 457 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 PYCARD-AS1I3L0S3 204 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 USP2O75604 605 aaPredicted RBP8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 ABHD16AO95870 558 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 CLTBP09497 229 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 PTGS1P23219 599 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 CCR9P51686 369 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 TRIM28Q13263 835 aaKnown RBP8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 EFR3AQ14156 821 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 RAB39AQ14964 217 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 ZNF827Q17R98 1081 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 TMTC4Q5T4D3 741 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 NUGGCQ68CJ6 796 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 MILR1Q7Z6M3 343 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 GATAD2AQ86YP4 633 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 GALNT13Q8IUC8 556 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 FAM20CQ8IXL6 584 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 MPP5Q8N3R9 675 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 VGLL2Q8N8G2 317 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 FLCNQ8NFG4 579 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 MAP6Q96JE9 813 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 HIST1H2AHQ96KK5 128 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 HIST1H2AJQ99878 128 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 SEMA3GQ9NS98 782 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 RBPJLQ9UBG7 517 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 AATKQ6ZMQ8 1374 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 NRAPQ86VF7 1730 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 COL18A1P39060 1754 aa8.33□□□□□ -1.08
SMARCA2-250ENST00000636367 NSD2O96028 1365 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 MAP2P11137 1827 aaKnown RBP8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 HOXC9P31274 260 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 SLC6A11P48066 632 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 SESN2P58004 480 aaPredicted RBP8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 CUL4AQ13619 759 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 SLC10A5Q5PT55 438 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 IPCEF1Q8WWN9 437 aaPredicted RBP8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 CFHR4Q92496 578 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 G6PC3Q9BUM1 346 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 EIF2AQ9BY44 585 aaKnown RBP8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 PEAK1Q9H792 1746 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 ACAD9Q9H845 621 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 PRDM8Q9NQV8 689 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 TRPC5Q9UL62 973 aaPredicted RBP8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 NWD2Q9ULI1 1742 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 COL5A2P05997 1499 aaPredicted RBP8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 ENDOD1O94919 500 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 MATN4O95460 622 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 APOA4P06727 396 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 ABCD3P28288 659 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 CLK1P49759 484 aaKnown RBP8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 OXCT1P55809 520 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 VAMP2P63027 116 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 RAP1GAP2Q684P5 730 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 BEND4Q6ZU67 534 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 TRIM48Q8IWZ4 208 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 CCDC150Q8NCX0 1101 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 SSH3Q8TE77 659 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 CREB3L4Q8TEY5 395 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 NEIL1Q96FI4 390 aaPredicted RBP8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 BAG1Q99933 345 aaPredicted RBP8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 TXLNGYQ9BZA5 131 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 ARHGAP39Q9C0H5 1083 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 RNPEPQ9H4A4 650 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 MANSC1Q9H8J5 431 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 ATP13A1Q9HD20 1204 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 INCENPQ9NQS7 918 aa8.32□□□□□ -1.08
SMARCA2-250ENST00000636367 CALCOCO1Q9P1Z2 691 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms