RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	GH1	P01241	217 aa		11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	SPATA31C1	P0DKV0	1188 aa		11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	CTNNA2	P26232	953 aa		11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	WDR4	P57081	412 aa	Known RBP	11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	ARPC4	P59998	168 aa		11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	IRX4	P78413	519 aa		11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	PPID	Q08752	370 aa	Known RBP	11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	EPHA7	Q15375	998 aa		11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	ANKRD20A4	Q4UJ75	823 aa		11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	ALKBH5	Q6P6C2	394 aa	Known RBP	11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	TREML1	Q86YW5	311 aa		11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	ALLC	Q8N6M5	410 aa		11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	FAM133A	Q8N9E0	248 aa		11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	DENND1A	Q8TEH3	1009 aa		11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	ATP6V0A1	Q93050	837 aa		11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	DNAJC1	Q96KC8	554 aa	Known RBP	11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	COX4I2	Q96KJ9	171 aa		11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	BIRC8	Q96P09	236 aa		11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	P2RX7	Q99572	595 aa	Known RBP	11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	REEP2	Q9BRK0	252 aa		11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	GAN	Q9H2C0	597 aa		11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	CDC42EP4	Q9H3Q1	356 aa	Known RBP	11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	MLXIPL	Q9NP71	852 aa		11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	TYW1	Q9NV66	732 aa	Known RBP	11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	FAF1	Q9UNN5	650 aa	Predicted RBP	11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	SMG5	Q9UPR3	1016 aa	Known RBP	11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	TTLL3	Q9Y4R7	772 aa		11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	PCDHA2	Q9Y5H9	948 aa		11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	PPP2R3B	Q9Y5P8	575 aa		11.31	□□□□□ -0.6
CHD2-223	ENST00000636306	PARP14	Q460N5	1801 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	NFKBIE	O00221	500 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	MEIS1	O00470	390 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	CSDE1	O75534	798 aa	Known RBP	11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	SMIM18	P0DKX4	95 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	PGM1	P36871	562 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	CCT8	P50990	548 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	CAV1	Q03135	178 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	ALCAM	Q13740	583 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	STAT4	Q14765	748 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	LRRC41	Q15345	812 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	CYP1B1	Q16678	543 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	KNOP1	Q1ED39	458 aa	Known RBP	11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	XRRA1	Q6P2D8	792 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	UGT2A3	Q6UWM9	527 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	OTOP1	Q7RTM1	612 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	FRMD5	Q7Z6J6	570 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	RASSF3	Q86WH2	238 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	TRIM59	Q8IWR1	403 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	CCDC110	Q8TBZ0	833 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	GLG1	Q92896	1179 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	GJA10	Q969M2	543 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	TTC25	Q96NG3	672 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	MXRA8	Q9BRK3	442 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	KCTD10	Q9H3F6	313 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	EBF3	Q9H4W6	596 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	SENP1	Q9P0U3	644 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	PADI4	Q9UM07	663 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	NR2E1	Q9Y466	385 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	NUMBL	Q9Y6R0	609 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	PHIP	Q8WWQ0	1821 aa		11.3	□□□□□ -0.6
CHD2-223	ENST00000636306	SYNGAP1	Q96PV0	1343 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	NKRF	O15226	690 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	MAGEB3	O15480	346 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	PEX1	O43933	1283 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	TRMU	O75648	421 aa	Known RBP	11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	OR6B1	O95007	311 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	ZBTB7A	O95365	584 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	TTC4	O95801	387 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	TRPC1	P48995	793 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	GMPS	P49915	693 aa	Predicted RBP	11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	CYP4A11	Q02928	519 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	CALCOCO2	Q13137	446 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	PDK3	Q15120	406 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	NFIL3	Q16649	462 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	PCNX4	Q63HM2	1172 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	CCDC62	Q6P9F0	684 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	IRF2BP2	Q7Z5L9	587 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	LRRC6	Q86X45	466 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	ERI1	Q8IV48	349 aa	Known RBP	11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	MICALL2	Q8IY33	904 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	CEP70	Q8NHQ1	597 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	PPP1R14C	Q8TAE6	165 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	TRPC4AP	Q8TEL6	797 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	PYROXD1	Q8WU10	500 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	SCFD1	Q8WVM8	642 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	CCT7	Q99832	543 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	WDR18	Q9BV38	432 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	STK33	Q9BYT3	514 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	ARL8B	Q9NVJ2	186 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	EURL	Q9NYK6	297 aa		11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
CHD2-223	ENST00000636306	ARHGEF35	A5YM69	484 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	MIF4GD	A9UHW6	222 aa	Known RBP	11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	GOLGA8T	H3BQL2	631 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	ADCY3	O60266	1144 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	SPAG7	O75391	227 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	GSTT2	P0CG29	244 aa		11.28	□□□□□ -0.6

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