RNA–Protein interactions for RNA: ENST00000635058.2

RHOXF1P3-201, Transcript of Rhox homeobox family member 1 pseudogene 3, humanhuman

BASIC

Gene RHOXF1P3, Length 502 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1P3-201ENST00000635058 CBWD1Q9BRT8 395 aa10.72□□□□□ -0.69
RHOXF1P3-201ENST00000635058 SLC46A2Q9BY10 475 aa10.72□□□□□ -0.69
RHOXF1P3-201ENST00000635058 TNMDQ9H2S6 317 aa10.72□□□□□ -0.69
RHOXF1P3-201ENST00000635058 KIF9Q9HAQ2 790 aa10.72□□□□□ -0.69
RHOXF1P3-201ENST00000635058 PDE11AQ9HCR9 933 aa10.72□□□□□ -0.69
RHOXF1P3-201ENST00000635058 ABCB6Q9NP58 842 aa10.72□□□□□ -0.69
RHOXF1P3-201ENST00000635058 GKN1Q9NS71 199 aa10.72□□□□□ -0.69
RHOXF1P3-201ENST00000635058 TDP1Q9NUW8 608 aa10.72□□□□□ -0.69
RHOXF1P3-201ENST00000635058 GDAP2Q9NXN4 497 aa10.72□□□□□ -0.69
RHOXF1P3-201ENST00000635058 GTSE1Q9NYZ3 720 aa10.72□□□□□ -0.69
RHOXF1P3-201ENST00000635058 SNX9Q9Y5X1 595 aa10.72□□□□□ -0.69
RHOXF1P3-201ENST00000635058 NOTCH4Q99466 2003 aa10.72□□□□□ -0.69
RHOXF1P3-201ENST00000635058 CACNA1IQ9P0X4 2223 aa10.72□□□□□ -0.69
RHOXF1P3-201ENST00000635058 PRR5-ARHGAP8B1AHC4 643 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 PPP6R2O75170 966 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 HSP90AA1P07900 732 aaKnown RBP10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 CTHP32929 405 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 CNR2P34972 360 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 SOX9P48436 509 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 NASPP49321 788 aaPredicted RBP10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 CASP5P51878 434 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 NLRP12P59046 1061 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 ARHGAP8P85298 464 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 GRSF1Q12849 480 aaKnown RBP eCLIP10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 MAPRE1Q15691 268 aaKnown RBP10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 INTS6LQ5JSJ4 861 aaKnown RBP10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 C4orf50Q6ZRC1 276 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 PRR23BQ6ZRT6 265 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 MON1AQ86VX9 555 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 ADGRF2Q8IZF7 708 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 TOP6BLQ8N6T0 577 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 LINC00301Q8NCQ3 95 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 LEO1Q8WVC0 666 aaPredicted RBP10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 HPDLQ96IR7 371 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 LRRC3BQ96PB8 259 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 VPS13AQ96RL7 3174 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 MKNK1Q9BUB5 465 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 IL21Q9HBE4 155 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 INTS13Q9NVM9 706 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 TFIP11Q9UBB9 837 aaKnown RBP10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 GTF3C4Q9UKN8 822 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 L1RE1Q9UN81 338 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 MYH15Q9Y2K3 1946 aa10.71□□□□□ -0.69
RHOXF1P3-201ENST00000635058 F5P12259 2224 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 MYH11P35749 1972 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 SPTBN4Q9H254 2564 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 CUTAO60888 179 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 ATG13O75143 517 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 PRAMEF12O95522 483 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 F11P03951 625 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 HMGA1P17096 107 aaKnown RBP10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 ACAT1P24752 427 aaKnown RBP10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 CYP2F1P24903 491 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 SNRPFP62306 86 aaKnown RBP10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 ASIC1P78348 528 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 SATB1Q01826 763 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 LMNB2Q03252 620 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 TNK2Q07912 1038 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 RUNX3Q13761 415 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 SIM2Q14190 667 aaPredicted RBP10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 PON2Q15165 354 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 DDR2Q16832 855 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 TXNDC8Q6A555 127 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 LAIR1Q6GTX8 287 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 LONP2Q86WA8 852 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 SCN4BQ8IWT1 228 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 ZSWIM2Q8NEG5 633 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 FUBP3Q96I24 572 aaKnown RBP eCLIP10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 FNBP1Q96RU3 617 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 MMS19Q96T76 1030 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 BACH2Q9BYV9 841 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 MTMR12Q9C0I1 747 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 SMG9Q9H0W8 520 aaKnown RBP10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 RBM12Q9NTZ6 932 aaKnown RBP10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 TMLHEQ9NVH6 421 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 KBTBD4Q9NVX7 518 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 EHD2Q9NZN4 543 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 MAGEC2Q9UBF1 373 aaPredicted RBP10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 USP18Q9UMW8 372 aa10.7□□□□□ -0.7
RHOXF1P3-201ENST00000635058 NCANO14594 1321 aa10.69□□□□□ -0.7
RHOXF1P3-201ENST00000635058 A0A087X0B3 334 aa10.69□□□□□ -0.7
RHOXF1P3-201ENST00000635058 TRAV19A0A0A6YYK7 116 aa10.69□□□□□ -0.7
RHOXF1P3-201ENST00000635058 GABRDO14764 452 aa10.69□□□□□ -0.7
RHOXF1P3-201ENST00000635058 EIF3DO15371 548 aaKnown RBP eCLIP10.69□□□□□ -0.7
RHOXF1P3-201ENST00000635058 PAPSS2O95340 614 aaPredicted RBP10.69□□□□□ -0.7
RHOXF1P3-201ENST00000635058 YEATS4O95619 227 aa10.69□□□□□ -0.7
RHOXF1P3-201ENST00000635058 RETP07949 1114 aa10.69□□□□□ -0.7
RHOXF1P3-201ENST00000635058 USP17L7P0C7H9 530 aa10.69□□□□□ -0.7
RHOXF1P3-201ENST00000635058 TNNI1P19237 187 aa10.69□□□□□ -0.7
RHOXF1P3-201ENST00000635058 PDE6CP51160 858 aa10.69□□□□□ -0.7
RHOXF1P3-201ENST00000635058 NR1H3Q13133 447 aa10.69□□□□□ -0.7
RHOXF1P3-201ENST00000635058 ZNF268Q14587 947 aaPredicted RBP10.69□□□□□ -0.7
RHOXF1P3-201ENST00000635058 PDGFRLQ15198 375 aa10.69□□□□□ -0.7
RHOXF1P3-201ENST00000635058 RSPO4Q2I0M5 234 aaPredicted RBP10.69□□□□□ -0.7
RHOXF1P3-201ENST00000635058 SOWAHAQ2M3V2 549 aa10.69□□□□□ -0.7
RHOXF1P3-201ENST00000635058 CFAP221Q4G0U5 840 aa10.69□□□□□ -0.7
RHOXF1P3-201ENST00000635058 TXNDC11Q6PKC3 985 aa10.69□□□□□ -0.7
RHOXF1P3-201ENST00000635058 VSTM1Q6UX27 236 aa10.69□□□□□ -0.7
RHOXF1P3-201ENST00000635058 CEP68Q76N32 757 aa10.69□□□□□ -0.7
RHOXF1P3-201ENST00000635058 HS2ST1Q7LGA3 356 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms