RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 DAPK3O43293 454 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 EIF3JO75822 258 aaKnown RBP3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 ZRANB2O95218 330 aaKnown RBP eCLIP3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 IL33O95760 270 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 TRIM27P14373 513 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 AGXTP21549 392 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 KRTAP5-9P26371 169 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 MTNR1BP49286 362 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 ACAP2Q15057 778 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 CLUL1Q15846 466 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 RRP12Q5JTH9 1297 aaKnown RBP3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 GORABQ5T7V8 394 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 FAM102AQ5T9C2 384 aaPredicted RBP3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 KRTAP5-4Q6L8H1 288 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 SLC4A10Q6U841 1118 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 KSR2Q6VAB6 950 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 ESPNLQ6ZVH7 1005 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 DOK3Q7L591 496 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 KCNK18Q7Z418 384 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 PLXDC1Q8IUK5 500 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 SAMD3Q8N6K7 520 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 GLB1L3Q8NCI6 653 aaPredicted RBP3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 NGDNQ8NEJ9 315 aaKnown RBP3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 OR5M3Q8NGP4 307 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 JADE3Q92613 823 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 RAX2Q96IS3 184 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 TEKT5Q96M29 485 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 Q96MF0 132 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 ANLNQ9NQW6 1124 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 DNAJC28Q9NX36 388 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 ZBTB21Q9ULJ3 1066 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 GPR45Q9Y5Y3 372 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 COL5A3P25940 1745 aaPredicted RBP3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 MEGF6O75095 1541 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 TTC21AQ8NDW8 1320 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 ITGB4P16144 1822 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 ADCY9O60503 1353 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 CCDC7Q96M83 1385 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 ADAMTS7Q9UKP4 1686 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 C4AP0C0L4 1744 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 C4BP0C0L5 1744 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 UBA6A0AVT1 1052 aaPredicted RBP3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 ALDH1A2O94788 518 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 ELANEP08246 267 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 MTHFD2P13995 350 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 HSPA6P17066 643 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 CACNA2D1P54289 1103 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 MANFP55145 182 aaKnown RBP3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 ADKP55263 362 aaKnown RBP3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 MRPS9P82933 396 aaKnown RBP3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 OS9Q13438 667 aaPredicted RBP3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 UGT8Q16880 541 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 TTC38Q5R3I4 469 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 SYCP2LQ5T4T6 812 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 PRAMEF9Q5VWM5 478 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 TIGD7Q6NT04 549 aaPredicted RBP3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 PPP4R4Q6NUP7 873 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 B3GNT9Q6UX72 402 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 SMC5Q8IY18 1101 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 EXOC8Q8IYI6 725 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 MSL3Q8N5Y2 521 aaKnown RBP3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 C7orf31Q8N865 590 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 SVIPQ8NHG7 77 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 SLC35G2Q8TBE7 412 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 TGFBRAP1Q8WUH2 860 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 E2F7Q96AV8 911 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 RUNDC1Q96C34 613 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 EAF2Q96CJ1 260 aaPredicted RBP3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 PDLIM2Q96JY6 352 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 SARGQ9BW04 601 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 PITHD1Q9GZP4 211 aaPredicted RBP3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 EPC1Q9H2F5 836 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 SLC12A5Q9H2X9 1139 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 NMRK2Q9NPI5 230 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 CHST12Q9NRB3 414 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 ASB6Q9NWX5 421 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 COMMD10Q9Y6G5 202 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 TTC21BQ7Z4L5 1316 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 A0A1W2PP64 1363 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 RTL1A6NKG5 1358 aa3.11□□□□□ -1.91
SMARCB1-208ENST00000634926 PRSS38A1L453 326 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 ELL2O00472 640 aaPredicted RBP3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 CELA2AP08217 269 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 POU2F2P09086 479 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 PHKG2P15735 406 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 SLC5A3P53794 718 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 SRSF2Q01130 221 aaKnown RBP3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 CD69Q07108 199 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 GRM3Q14832 879 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 ARHGAP29Q52LW3 1261 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 CT83Q5H943 113 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 PITRM1Q5JRX3 1037 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 TOR2AQ5JU69 321 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 ATAT1Q5SQI0 421 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 ZBTB41Q5SVQ8 909 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 CHST15Q7LFX5 561 aaPredicted RBP3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 KANSL1Q7Z3B3 1105 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 MIER2Q8N344 545 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 RNF169Q8NCN4 708 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms