RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 NDST1P52848 882 aa20.7■□□□□ 0.9
CROCCP4-202ENST00000633627 PSMC1P62191 440 aaKnown RBP20.7■□□□□ 0.9
CROCCP4-202ENST00000633627 ITIH3Q06033 890 aa20.7■□□□□ 0.9
CROCCP4-202ENST00000633627 SMAD4Q13485 552 aaKnown RBP20.7■□□□□ 0.9
CROCCP4-202ENST00000633627 CUL2Q13617 745 aa20.7■□□□□ 0.9
CROCCP4-202ENST00000633627 GBP6Q6ZN66 633 aa20.7■□□□□ 0.9
CROCCP4-202ENST00000633627 GPR149Q86SP6 731 aa20.7■□□□□ 0.9
CROCCP4-202ENST00000633627 CRYBG2Q8N1P7 616 aa20.7■□□□□ 0.9
CROCCP4-202ENST00000633627 TTC9BQ8N6N2 239 aa20.7■□□□□ 0.9
CROCCP4-202ENST00000633627 UBR7Q8N806 425 aa20.7■□□□□ 0.9
CROCCP4-202ENST00000633627 SPPL2BQ8TCT7 592 aa20.7■□□□□ 0.9
CROCCP4-202ENST00000633627 WHAMMQ8TF30 809 aa20.7■□□□□ 0.9
CROCCP4-202ENST00000633627 SUSD6Q92537 303 aa20.7■□□□□ 0.9
CROCCP4-202ENST00000633627 PRKD2Q9BZL6 878 aa20.7■□□□□ 0.9
CROCCP4-202ENST00000633627 DPEP3Q9H4B8 488 aa20.7■□□□□ 0.9
CROCCP4-202ENST00000633627 HMGXB4Q9UGU5 601 aa20.7■□□□□ 0.9
CROCCP4-202ENST00000633627 INSL5Q9Y5Q6 135 aa20.7■□□□□ 0.9
CROCCP4-202ENST00000633627 PRRG1O14668 218 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 CILPO75339 1184 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 POU2F2P09086 479 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 ATP1A3P13637 1013 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 SLC9A1P19634 815 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 MRPS5P82675 430 aaKnown RBP20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 EXOC3L4Q17RC7 722 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 AAK1Q2M2I8 961 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 PPM1LQ5SGD2 360 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 PHLDB3Q6NSJ2 640 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 LRSAM1Q6UWE0 723 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 CYP26C1Q6V0L0 522 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 ARHGEF19Q8IW93 802 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 TTC39CQ8N584 583 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 B3GALNT2Q8NCR0 500 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 MYCBPAPQ8TBZ2 947 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 TWNKQ96RR1 684 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 LPIN3Q9BQK8 851 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 VPS16Q9H269 839 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 CISHQ9NSE2 258 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 CDH22Q9UJ99 828 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 SLC27A5Q9Y2P5 690 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 USP15Q9Y4E8 981 aaPredicted RBP20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 PCDHB5Q9Y5E4 795 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 UNC80Q8N2C7 3258 aa20.69■□□□□ 0.9
CROCCP4-202ENST00000633627 C2orf16Q68DN1 1984 aa20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 SPDYE4A6NLX3 237 aa20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 BECN2A8MW95 431 aa20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 CD58P19256 250 aa20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 TBXAS1P24557 533 aaPredicted RBP20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 PON1P27169 355 aa20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 CDR1P51861 262 aa20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 COPB1P53618 953 aaKnown RBP20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 GCNT1Q02742 428 aa20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 MAPRE1Q15691 268 aaKnown RBP20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 PUS10Q3MIT2 529 aaKnown RBP20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 CFAP221Q4G0U5 840 aa20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 PTCRAQ6ISU1 281 aaPredicted RBP20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 CES5AQ6NT32 575 aa20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 DPY19L2P1Q6NXN4 242 aa20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 TRIM65Q6PJ69 517 aa20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 KAT5Q92993 513 aa20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 FUBP3Q96I24 572 aaKnown RBP eCLIP20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 TNIP3Q96KP6 325 aa20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 ELOVL4Q9GZR5 314 aa20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 ABCB6Q9NP58 842 aa20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 ABI2Q9NYB9 513 aaPredicted RBP20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 YIPF1Q9Y548 306 aa20.68■□□□□ 0.9
CROCCP4-202ENST00000633627 PTPRDP23468 1912 aa20.67■□□□□ 0.9
CROCCP4-202ENST00000633627 HAPLN1P10915 354 aaPredicted RBP20.67■□□□□ 0.9
CROCCP4-202ENST00000633627 CDK11BP21127 795 aaKnown RBP20.67■□□□□ 0.9
CROCCP4-202ENST00000633627 TUFMP49411 452 aaKnown RBP20.67■□□□□ 0.9
CROCCP4-202ENST00000633627 KCNQ1P51787 676 aa20.67■□□□□ 0.9
CROCCP4-202ENST00000633627 ZNF445P59923 1031 aa20.67■□□□□ 0.9
CROCCP4-202ENST00000633627 KCNMA1Q12791 1236 aa20.67■□□□□ 0.9
CROCCP4-202ENST00000633627 MDH1BQ5I0G3 518 aa20.67■□□□□ 0.9
CROCCP4-202ENST00000633627 ACOT1Q86TX2 421 aa20.67■□□□□ 0.9
CROCCP4-202ENST00000633627 LUZP1Q86V48 1076 aa20.67■□□□□ 0.9
CROCCP4-202ENST00000633627 PPM1KQ8N3J5 372 aa20.67■□□□□ 0.9
CROCCP4-202ENST00000633627 ANKRD20A12PQ8NF67 263 aa20.67■□□□□ 0.9
CROCCP4-202ENST00000633627 FAM200AQ8TCP9 573 aa20.67■□□□□ 0.9
CROCCP4-202ENST00000633627 MYLPFQ96A32 169 aa20.67■□□□□ 0.9
CROCCP4-202ENST00000633627 PCED1BQ96HM7 432 aa20.67■□□□□ 0.9
CROCCP4-202ENST00000633627 KREMEN1Q96MU8 473 aa20.67■□□□□ 0.9
CROCCP4-202ENST00000633627 ASB2Q96Q27 587 aa20.67■□□□□ 0.9
CROCCP4-202ENST00000633627 NT5C1AQ9BXI3 368 aa20.67■□□□□ 0.9
CROCCP4-202ENST00000633627 SIX2Q9NPC8 291 aa20.67■□□□□ 0.9
CROCCP4-202ENST00000633627 C5orf42Q9H799 3197 aa20.66■□□□□ 0.9
CROCCP4-202ENST00000633627 CCL16O15467 120 aa20.66■□□□□ 0.9
CROCCP4-202ENST00000633627 ACO1P21399 889 aaKnown RBP20.66■□□□□ 0.9
CROCCP4-202ENST00000633627 ORC1Q13415 861 aa20.66■□□□□ 0.9
CROCCP4-202ENST00000633627 SMAD2Q15796 467 aaKnown RBP20.66■□□□□ 0.9
CROCCP4-202ENST00000633627 ATAT1Q5SQI0 421 aa20.66■□□□□ 0.9
CROCCP4-202ENST00000633627 C4orf50Q6ZRC1 276 aa20.66■□□□□ 0.9
CROCCP4-202ENST00000633627 RRAGAQ7L523 313 aa20.66■□□□□ 0.9
CROCCP4-202ENST00000633627 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.66■□□□□ 0.9
CROCCP4-202ENST00000633627 SMG7Q92540 1137 aaKnown RBP20.66■□□□□ 0.9
CROCCP4-202ENST00000633627 B3GNT5Q9BYG0 378 aa20.66■□□□□ 0.9
CROCCP4-202ENST00000633627 NOTCH4Q99466 2003 aa20.66■□□□□ 0.9
CROCCP4-202ENST00000633627 LGALS16A8MUM7 142 aa20.65■□□□□ 0.9
CROCCP4-202ENST00000633627 PES1O00541 588 aaKnown RBP20.65■□□□□ 0.9
CROCCP4-202ENST00000633627 SOAT2O75908 522 aa20.65■□□□□ 0.9
CROCCP4-202ENST00000633627 LRG1P02750 347 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms