RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 MTG1Q9BT17 334 aaPredicted RBP5.88□□□□□ -1.47
NEK3-211ENST00000629912 NT5C1AQ9BXI3 368 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 EIF2AQ9BY44 585 aaKnown RBP5.88□□□□□ -1.47
NEK3-211ENST00000629912 FRMD8P1Q9BZ68 369 aaPredicted RBP5.88□□□□□ -1.47
NEK3-211ENST00000629912 OSBPL8Q9BZF1 889 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 DCLK3Q9C098 648 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 DNAI2Q9GZS0 605 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 FAM49AQ9H0Q0 323 aaPredicted RBP5.88□□□□□ -1.47
NEK3-211ENST00000629912 TSPYL1Q9H0U9 437 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 NEUROG2Q9H2A3 272 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 PLEKHA4Q9H4M7 779 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 SMYD3Q9H7B4 428 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 GDAP2Q9NXN4 497 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 GRHL1Q9NZI5 618 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 VPS18Q9P253 973 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 CYTH4Q9UIA0 394 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 UBQLN1Q9UMX0 589 aaKnown RBP5.88□□□□□ -1.47
NEK3-211ENST00000629912 SNX24Q9Y343 169 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 NEU2Q9Y3R4 380 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.88□□□□□ -1.47
NEK3-211ENST00000629912 SCN10AQ9Y5Y9 1956 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 SMIM28A0A1B0GU29 152 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 F8VP50 259 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 TJP3O95049 919 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 ECEL1O95672 775 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 ALDH1A1P00352 501 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 PFKMP08237 780 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 KRT7P08729 469 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 RALAP11233 206 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 CYBAP13498 195 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 RARGP13631 454 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 IVDP26440 423 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 CTGFP29279 349 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 RFC1P35251 1148 aaPredicted RBP5.87□□□□□ -1.47
NEK3-211ENST00000629912 PCK1P35558 622 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 FLT3P36888 993 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 PNPLA4P41247 253 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 RPL21P46778 160 aaKnown RBP5.87□□□□□ -1.47
NEK3-211ENST00000629912 KCNJ1P48048 391 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 RPL34P49207 117 aaKnown RBP5.87□□□□□ -1.47
NEK3-211ENST00000629912 EIF3BP55884 814 aaKnown RBP5.87□□□□□ -1.47
NEK3-211ENST00000629912 FCGRTP55899 365 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 PSMC1P62191 440 aaKnown RBP5.87□□□□□ -1.47
NEK3-211ENST00000629912 SKOR1P84550 965 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 ZNF200P98182 395 aaPredicted RBP5.87□□□□□ -1.47
NEK3-211ENST00000629912 BEX3Q00994 111 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 DHX9Q08211 1270 aaKnown RBP5.87□□□□□ -1.47
NEK3-211ENST00000629912 TMEM62Q0P6H9 643 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 NFX1Q12986 1120 aaKnown RBP5.87□□□□□ -1.47
NEK3-211ENST00000629912 PTK6Q13882 451 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 SLMAPQ14BN4 828 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 UAP1Q16222 522 aaPredicted RBP5.87□□□□□ -1.47
NEK3-211ENST00000629912 HADHQ16836 314 aaKnown RBP5.87□□□□□ -1.47
NEK3-211ENST00000629912 PKDCCQ504Y2 493 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 MFSD14CQ5VZR4 134 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 C9orf57Q5W0N0 161 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 RHBDF2Q6PJF5 856 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 SPOCD1Q6ZMY3 1216 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 ARCQ7LC44 396 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 TMC3Q7Z5M5 1100 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 CROCCP2Q86T23 111 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 TMEM110Q86TL2 294 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 SESTD1Q86VW0 696 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 REM2Q8IYK8 340 aaPredicted RBP5.87□□□□□ -1.47
NEK3-211ENST00000629912 C7orf31Q8N865 590 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 BBOF1Q8ND07 529 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 CMASQ8NFW8 434 aaPredicted RBP5.87□□□□□ -1.47
NEK3-211ENST00000629912 RIN2Q8WYP3 895 aaPredicted RBP5.87□□□□□ -1.47
NEK3-211ENST00000629912 ARL8AQ96BM9 186 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 MCEEQ96PE7 176 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 SLITRK1Q96PX8 696 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 CPXM1Q96SM3 734 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 RUFY1Q96T51 708 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 FMO2Q99518 471 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 OSMRQ99650 979 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 NCAPGQ9BPX3 1015 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 HERPUD2Q9BSE4 406 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 TRIM51Q9BSJ1 452 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 TMEM109Q9BVC6 243 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 SLC4A5Q9BY07 1137 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 FOXP3Q9BZS1 431 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 DPH5Q9H2P9 285 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 FAM204AQ9H8W3 233 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 TMBIM4Q9HC24 238 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 CYLDQ9NQC7 956 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 CHST12Q9NRB3 414 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 MTRF1LQ9UGC7 380 aaKnown RBP5.87□□□□□ -1.47
NEK3-211ENST00000629912 GTF2IRD1Q9UHL9 959 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 PLAAQ9Y263 795 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 USTQ9Y2C2 406 aa5.87□□□□□ -1.47
NEK3-211ENST00000629912 GOLGA6CA6NDK9 693 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 C3orf70A6NLC5 250 aaPredicted RBP5.86□□□□□ -1.47
NEK3-211ENST00000629912 KPNA7A9QM74 516 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 HMGB1P1B2RPK0 211 aaPredicted RBP5.86□□□□□ -1.47
NEK3-211ENST00000629912 NDC80O14777 642 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 SEPT4O43236 478 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 SHOX2O60902 331 aaPredicted RBP5.86□□□□□ -1.47
NEK3-211ENST00000629912 RPS6KA5O75582 802 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 RECQL4O94761 1208 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 ECM2O94769 699 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms