RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 SNX12Q9UMY4 172 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 ZBTB39O15060 712 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 DGKIO75912 1065 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 RGS2P41220 211 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 TBL3Q12788 808 aaKnown RBP12.23□□□□□ -0.45
SHPRH-211ENST00000629427 FEZF2Q8TBJ5 459 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 IGDCC4Q8TDY8 1250 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 OSBPL8Q9BZF1 889 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 ACTN3Q08043 901 aaPredicted RBP12.23□□□□□ -0.45
SHPRH-211ENST00000629427 PWP1Q13610 501 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 PARP9Q8IXQ6 854 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 KRT78Q8N1N4 520 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 USP13Q92995 863 aaPredicted RBP12.23□□□□□ -0.45
SHPRH-211ENST00000629427 TARS2Q9BW92 718 aaKnown RBP12.23□□□□□ -0.45
SHPRH-211ENST00000629427 KCNH7Q9NS40 1196 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.23□□□□□ -0.45
SHPRH-211ENST00000629427 JCADQ9P266 1359 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 USP27XA6NNY8 438 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 DCDC2CA8MYV0 355 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 F5H5T6 163 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 TBX3O15119 743 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 EIF3DO15371 548 aaKnown RBP eCLIP12.23□□□□□ -0.45
SHPRH-211ENST00000629427 MBL2P11226 248 aaPredicted RBP12.23□□□□□ -0.45
SHPRH-211ENST00000629427 S100A5P33763 92 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 PTGER2P43116 358 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 ZNF438Q7Z4V0 828 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 LINC00523Q86TU6 105 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 ZKSCAN4Q969J2 545 aaPredicted RBP12.23□□□□□ -0.45
SHPRH-211ENST00000629427 FBXO32Q969P5 355 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 DDIT4Q9NX09 232 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 RNF112Q9ULX5 631 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 PITPNM2Q9BZ72 1349 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 HNRNPRO43390 633 aaKnown RBP12.23□□□□□ -0.45
SHPRH-211ENST00000629427 CST8O60676 142 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 SRP72O76094 671 aaKnown RBP12.23□□□□□ -0.45
SHPRH-211ENST00000629427 ANKS6Q68DC2 871 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 STYK1Q6J9G0 422 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 METTL16Q86W50 562 aaKnown RBP12.23□□□□□ -0.45
SHPRH-211ENST00000629427 CDR2LQ86X02 465 aaPredicted RBP12.23□□□□□ -0.45
SHPRH-211ENST00000629427 FAM71DQ8N9W8 422 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 EME1Q96AY2 570 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 CPB2Q96IY4 423 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 C9orf72Q96LT7 481 aa12.23□□□□□ -0.45
SHPRH-211ENST00000629427 PRPF18Q99633 342 aaKnown RBP12.23□□□□□ -0.45
SHPRH-211ENST00000629427 A2ML1A8K2U0 1454 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 MAP3K13O43283 966 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 SLC26A4O43511 780 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 AP1G2O75843 785 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 KCNK10P57789 538 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 MRPS15P82914 257 aaKnown RBP12.22□□□□□ -0.45
SHPRH-211ENST00000629427 SFSWAPQ12872 951 aaKnown RBP12.22□□□□□ -0.45
SHPRH-211ENST00000629427 TTLL9Q3SXZ7 439 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 SBK1Q52WX2 424 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 ATG9AQ7Z3C6 839 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 UCMAQ8WVF2 138 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 NFKBIZQ9BYH8 718 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 NYAP2Q9P242 653 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 RASSF10A6NK89 507 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 VTNP04004 478 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 CHN1P15882 459 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 CHI3L1P36222 383 aaPredicted RBP12.22□□□□□ -0.45
SHPRH-211ENST00000629427 MAGEB10Q96LZ2 347 aaPredicted RBP12.22□□□□□ -0.45
SHPRH-211ENST00000629427 ECSITQ9BQ95 431 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 KCTD10Q9H3F6 313 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 CCDC144BQ3MJ40 725 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 SPATA31E1Q6ZUB1 1445 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 GALNT4Q8N4A0 578 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 ACSF2Q96CM8 615 aaPredicted RBP12.22□□□□□ -0.45
SHPRH-211ENST00000629427 ASCC2Q9H1I8 757 aaPredicted RBP12.22□□□□□ -0.45
SHPRH-211ENST00000629427 hCG_2014768A0A024R1R8 64 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 NBPF26B4DH59 902 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 RASSF9O75901 435 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 ENDOD1O94919 500 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 SERPINB4P48594 390 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 MROH9Q5TGP6 573 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 LAYNQ6UX15 382 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 BBS7Q8IWZ6 715 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 NBPF15Q8N660 670 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 HASPINQ8TF76 798 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 RPRD1AQ96P16 312 aaPredicted RBP12.22□□□□□ -0.45
SHPRH-211ENST00000629427 OLFM3Q96PB7 478 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 TMEM245Q9H330 911 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 SPACA6W5XKT8 324 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 FAM205CA6NFA0 338 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 VWA5AO00534 786 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 SRGNP10124 158 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 VCLP18206 1134 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 DPYDQ12882 1025 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 CAMK2GQ13555 558 aaPredicted RBP12.22□□□□□ -0.45
SHPRH-211ENST00000629427 FUT11Q495W5 492 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 EPC2Q52LR7 807 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 SEZ6Q53EL9 994 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 E4F1Q66K89 784 aaPredicted RBP12.22□□□□□ -0.45
SHPRH-211ENST00000629427 LONP2Q86WA8 852 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 CAND2O75155 1236 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 GUCA1AP43080 201 aaPredicted RBP12.22□□□□□ -0.45
SHPRH-211ENST00000629427 KLK7P49862 253 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 ATN1P54259 1190 aaPredicted RBP12.22□□□□□ -0.45
SHPRH-211ENST00000629427 NAPEPLDQ6IQ20 393 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 LVRNQ6Q4G3 990 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms