RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 MANSC1Q9H8J5 431 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 TCEAL9Q9UHQ7 104 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 A0A0G2JND7 137 aa20.58■□□□□ 0.89
PDLIM3-212ENST00000620787 CFAP69A5D8W1 941 aa20.58■□□□□ 0.89
PDLIM3-212ENST00000620787 F8VP50 259 aa20.58■□□□□ 0.89
PDLIM3-212ENST00000620787 CDKN2BP42772 138 aa20.58■□□□□ 0.89
PDLIM3-212ENST00000620787 PGM5Q15124 567 aa20.58■□□□□ 0.89
PDLIM3-212ENST00000620787 SEPT7Q16181 437 aaKnown RBP20.58■□□□□ 0.89
PDLIM3-212ENST00000620787 ACSBG2Q5FVE4 666 aa20.58■□□□□ 0.89
PDLIM3-212ENST00000620787 THEMIS2Q5TEJ8 643 aa20.58■□□□□ 0.89
PDLIM3-212ENST00000620787 ATP11CQ8NB49 1132 aa20.58■□□□□ 0.89
PDLIM3-212ENST00000620787 SLC35B2Q8TB61 432 aa20.58■□□□□ 0.89
PDLIM3-212ENST00000620787 DCAKDQ8WVC6 231 aa20.58■□□□□ 0.89
PDLIM3-212ENST00000620787 SKA1Q96BD8 255 aa20.58■□□□□ 0.89
PDLIM3-212ENST00000620787 PRR11Q96HE9 360 aaPredicted RBP20.58■□□□□ 0.89
PDLIM3-212ENST00000620787 FNBP1Q96RU3 617 aa20.58■□□□□ 0.89
PDLIM3-212ENST00000620787 SH3GL3Q99963 347 aa20.58■□□□□ 0.89
PDLIM3-212ENST00000620787 TRIM55Q9BYV6 548 aa20.58■□□□□ 0.89
PDLIM3-212ENST00000620787 CNTN6Q9UQ52 1028 aa20.58■□□□□ 0.89
PDLIM3-212ENST00000620787 GOLGA8RI6L899 631 aa20.58■□□□□ 0.88
PDLIM3-212ENST00000620787 KRT36O76013 467 aa20.58■□□□□ 0.88
PDLIM3-212ENST00000620787 MMP8P22894 467 aa20.58■□□□□ 0.88
PDLIM3-212ENST00000620787 PHBP35232 272 aa20.58■□□□□ 0.88
PDLIM3-212ENST00000620787 KRT76Q01546 638 aa20.58■□□□□ 0.88
PDLIM3-212ENST00000620787 OGDHQ02218 1023 aa20.58■□□□□ 0.88
PDLIM3-212ENST00000620787 TFDP3Q5H9I0 405 aa20.58■□□□□ 0.88
PDLIM3-212ENST00000620787 IRGCQ6NXR0 463 aa20.58■□□□□ 0.88
PDLIM3-212ENST00000620787 MCF2L2Q86YR7 1114 aa20.58■□□□□ 0.88
PDLIM3-212ENST00000620787 PYROXD1Q8WU10 500 aa20.58■□□□□ 0.88
PDLIM3-212ENST00000620787 ZBTB10Q96DT7 871 aa20.58■□□□□ 0.88
PDLIM3-212ENST00000620787 NSL1Q96IY1 281 aa20.58■□□□□ 0.88
PDLIM3-212ENST00000620787 CEP170P1Q96L14 293 aa20.58■□□□□ 0.88
PDLIM3-212ENST00000620787 KLF6Q99612 283 aaPredicted RBP20.58■□□□□ 0.88
PDLIM3-212ENST00000620787 PHACTR1Q9C0D0 580 aa20.58■□□□□ 0.88
PDLIM3-212ENST00000620787 KCNK13Q9HB14 408 aa20.58■□□□□ 0.88
PDLIM3-212ENST00000620787 ASB3Q9Y575 518 aa20.58■□□□□ 0.88
PDLIM3-212ENST00000620787 SNCAIPQ9Y6H5 919 aa20.58■□□□□ 0.88
PDLIM3-212ENST00000620787 TCRBV5S1A1TA0A578 114 aa20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 DNAJC6O75061 913 aa20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 SP100P23497 879 aaPredicted RBP20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 NLRP11P59045 1033 aaKnown RBP20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 KPNB1Q14974 876 aaKnown RBP20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 CCDC6Q16204 474 aa20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 SNX30Q5VWJ9 437 aa20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 PPP1R2P3Q6NXS1 205 aa20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 LRRC6Q86X45 466 aa20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 UCMAQ8WVF2 138 aa20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 CPT1BQ92523 772 aa20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 TUBB6Q9BUF5 446 aa20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 CLRN2A0PK11 232 aa20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 ZNF862O60290 1169 aa20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 NEFHP12036 1026 aa20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 MYCLP12524 364 aaPredicted RBP20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 ARL4CP56559 192 aa20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 PLCB3Q01970 1234 aa20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 SLC27A3Q5K4L6 730 aa20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 PCGF5Q86SE9 256 aa20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 PPIL6Q8IXY8 311 aa20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 MCEEQ96PE7 176 aa20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 TSSK1BQ9BXA7 367 aa20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 ALG13Q9NP73 1137 aaKnown RBP20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 ARHGAP28Q9P2N2 729 aa20.57■□□□□ 0.88
PDLIM3-212ENST00000620787 STBD1O95210 358 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 ARFIP2P53365 341 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 CDK16Q00536 496 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 OCRLQ01968 901 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 KLHL38Q2WGJ6 581 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 RINLQ6ZS11 566 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 C3orf62Q6ZUJ4 267 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 NAT8LQ8N9F0 302 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 ALKBH8Q96BT7 664 aaKnown RBP20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 TSC22D3Q99576 134 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 XPNPEP1Q9NQW7 623 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 FBXO6Q9NRD1 293 aaPredicted RBP20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 ZNRF3Q9ULT6 936 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 LRCH1Q9Y2L9 728 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 ZNF541Q9H0D2 1346 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 DOCK5Q9H7D0 1870 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 E7ESA3 106 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 SERPINB3P29508 390 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 ACOT2P49753 483 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 GDF10P55107 478 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 INHBEP58166 350 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 RHPN2Q8IUC4 686 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 TMEM120AQ9BXJ8 343 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 PDLIM7Q9NR12 457 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 HOMER2Q9NSB8 354 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 NUB1Q9Y5A7 615 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 KIAA1217Q5T5P2 1943 aa20.56■□□□□ 0.88
PDLIM3-212ENST00000620787 GYG2O15488 501 aa20.55■□□□□ 0.88
PDLIM3-212ENST00000620787 PSMG1O95456 288 aa20.55■□□□□ 0.88
PDLIM3-212ENST00000620787 DHRS4L1P0CG22 281 aa20.55■□□□□ 0.88
PDLIM3-212ENST00000620787 PSMC4P43686 418 aa20.55■□□□□ 0.88
PDLIM3-212ENST00000620787 LIG4P49917 911 aa20.55■□□□□ 0.88
PDLIM3-212ENST00000620787 CDAN1Q8IWY9 1227 aa20.55■□□□□ 0.88
PDLIM3-212ENST00000620787 CPXCR1Q8N123 301 aa20.55■□□□□ 0.88
PDLIM3-212ENST00000620787 FBXO36Q8NEA4 188 aa20.55■□□□□ 0.88
PDLIM3-212ENST00000620787 TEKT4Q8WW24 435 aa20.55■□□□□ 0.88
PDLIM3-212ENST00000620787 ZNF606Q8WXB4 792 aa20.55■□□□□ 0.88
PDLIM3-212ENST00000620787 SCG3Q8WXD2 468 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms