RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 LCLAT1Q6UWP7 414 aa20.13■□□□□ 0.81
PSPC1-206ENST00000619300 CCDC50Q8IVM0 306 aa20.13■□□□□ 0.81
PSPC1-206ENST00000619300 CCDC105Q8IYK2 499 aa20.13■□□□□ 0.81
PSPC1-206ENST00000619300 IQCKQ8N0W5 287 aa20.13■□□□□ 0.81
PSPC1-206ENST00000619300 MRPL45Q9BRJ2 306 aaKnown RBP20.13■□□□□ 0.81
PSPC1-206ENST00000619300 RNF19AQ9NV58 838 aa20.13■□□□□ 0.81
PSPC1-206ENST00000619300 IPPQ9Y573 584 aa20.13■□□□□ 0.81
PSPC1-206ENST00000619300 TRIP12Q14669 1992 aaPredicted RBP20.13■□□□□ 0.81
PSPC1-206ENST00000619300 GOLGA8SH3BPF8 625 aa20.12■□□□□ 0.81
PSPC1-206ENST00000619300 ERBB2P04626 1255 aa20.12■□□□□ 0.81
PSPC1-206ENST00000619300 RFC1P35251 1148 aaPredicted RBP20.12■□□□□ 0.81
PSPC1-206ENST00000619300 GABRB2P47870 512 aa20.12■□□□□ 0.81
PSPC1-206ENST00000619300 CACNB2Q08289 660 aaPredicted RBP20.12■□□□□ 0.81
PSPC1-206ENST00000619300 TRIM32Q13049 653 aa20.12■□□□□ 0.81
PSPC1-206ENST00000619300 DPH6Q7L8W6 267 aa20.12■□□□□ 0.81
PSPC1-206ENST00000619300 FAM228AQ86W67 206 aa20.12■□□□□ 0.81
PSPC1-206ENST00000619300 XYLT1Q86Y38 959 aa20.12■□□□□ 0.81
PSPC1-206ENST00000619300 HERPUD2Q9BSE4 406 aa20.12■□□□□ 0.81
PSPC1-206ENST00000619300 VPS18Q9P253 973 aa20.12■□□□□ 0.81
PSPC1-206ENST00000619300 FAN1Q9Y2M0 1017 aa20.12■□□□□ 0.81
PSPC1-206ENST00000619300 M0QZ92 97 aa20.12■□□□□ 0.81
PSPC1-206ENST00000619300 PIRO00625 290 aa20.12■□□□□ 0.81
PSPC1-206ENST00000619300 XPOTO43592 962 aaKnown RBP20.12■□□□□ 0.81
PSPC1-206ENST00000619300 RALAP11233 206 aa20.12■□□□□ 0.81
PSPC1-206ENST00000619300 PDCLQ13371 301 aa20.12■□□□□ 0.81
PSPC1-206ENST00000619300 STILQ15468 1287 aa20.12■□□□□ 0.81
PSPC1-206ENST00000619300 GDF6Q6KF10 455 aaPredicted RBP20.12■□□□□ 0.81
PSPC1-206ENST00000619300 RSPH3Q86UC2 560 aa20.12■□□□□ 0.81
PSPC1-206ENST00000619300 RCOR2Q8IZ40 523 aa20.12■□□□□ 0.81
PSPC1-206ENST00000619300 SMG8Q8ND04 991 aaKnown RBP20.12■□□□□ 0.81
PSPC1-206ENST00000619300 UBA3Q8TBC4 463 aa20.12■□□□□ 0.81
PSPC1-206ENST00000619300 C1orf54Q8WWF1 131 aa20.12■□□□□ 0.81
PSPC1-206ENST00000619300 RIN2Q8WYP3 895 aaPredicted RBP20.12■□□□□ 0.81
PSPC1-206ENST00000619300 GPBP1L1Q9HC44 474 aaPredicted RBP20.12■□□□□ 0.81
PSPC1-206ENST00000619300 CDY2AQ9Y6F7 541 aa20.12■□□□□ 0.81
PSPC1-206ENST00000619300 CYP3A5P20815 502 aa20.11■□□□□ 0.81
PSPC1-206ENST00000619300 GJC1P36383 396 aa20.11■□□□□ 0.81
PSPC1-206ENST00000619300 KCNJ1P48048 391 aa20.11■□□□□ 0.81
PSPC1-206ENST00000619300 CFAP58Q5T655 872 aa20.11■□□□□ 0.81
PSPC1-206ENST00000619300 TWF2Q6IBS0 349 aaKnown RBP20.11■□□□□ 0.81
PSPC1-206ENST00000619300 C12orf29Q8N999 325 aa20.11■□□□□ 0.81
PSPC1-206ENST00000619300 FNIP1Q8TF40 1166 aa20.11■□□□□ 0.81
PSPC1-206ENST00000619300 LRRC45Q96CN5 670 aa20.11■□□□□ 0.81
PSPC1-206ENST00000619300 HEMGNQ9BXL5 484 aa20.11■□□□□ 0.81
PSPC1-206ENST00000619300 OSBPL8Q9BZF1 889 aa20.11■□□□□ 0.81
PSPC1-206ENST00000619300 PRDM10Q9NQV6 1147 aa20.11■□□□□ 0.81
PSPC1-206ENST00000619300 TSPAN16Q9UKR8 245 aa20.11■□□□□ 0.81
PSPC1-206ENST00000619300 TRPV2Q9Y5S1 764 aa20.11■□□□□ 0.81
PSPC1-206ENST00000619300 RNF40O75150 1001 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 TCF4P15884 667 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 CETN2P41208 172 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 KLF1Q13351 362 aaPredicted RBP20.1■□□□□ 0.81
PSPC1-206ENST00000619300 ATP13A4Q4VNC1 1196 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 FBXO47Q5MNV8 452 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 SLCO2A1Q92959 643 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 MCRS1Q96EZ8 462 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 ZIM3Q96PE6 472 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 SH3GL2Q99962 352 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 HOMER3Q9NSC5 361 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 SNX24Q9Y343 169 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 KIF3CO14782 793 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 OPA1O60313 960 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 ADAMTS4O75173 837 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 PSMA2P25787 234 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 GYS2P54840 703 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 NFX1Q12986 1120 aaKnown RBP20.1■□□□□ 0.81
PSPC1-206ENST00000619300 NOGQ13253 232 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 SOWAHAQ2M3V2 549 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 ACOT1Q86TX2 421 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 UNC93AQ86WB7 457 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 ARRDC4Q8NCT1 418 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 JOSD2Q8TAC2 188 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 PIK3R5Q8WYR1 880 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 RNF25Q96BH1 459 aaPredicted RBP20.1■□□□□ 0.81
PSPC1-206ENST00000619300 RBM41Q96IZ5 413 aaKnown RBP20.1■□□□□ 0.81
PSPC1-206ENST00000619300 RUFY1Q96T51 708 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 PCNTO95613 3336 aa20.1■□□□□ 0.81
PSPC1-206ENST00000619300 RALGAPA2Q2PPJ7 1873 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 ECEL1O95672 775 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 GBP1P32455 592 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 FLT3P36888 993 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 PNPLA4P41247 253 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 FAM47CQ5HY64 1035 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 DCLK3Q9C098 648 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 XPNPEP3Q9NQH7 507 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 CHST7Q9NS84 486 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 ZDHHC18Q9NUE0 388 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 ADAM21Q9UKJ8 722 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 PTPN22Q9Y2R2 807 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 TRIP11Q15643 1979 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 KPNA7A9QM74 516 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 PFKMP08237 780 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 CAP1Q01518 475 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 SNX1Q13596 522 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 PPP1R26Q5T8A7 1209 aaPredicted RBP20.09■□□□□ 0.81
PSPC1-206ENST00000619300 ANKS1BQ7Z6G8 1248 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 SERINC5Q86VE9 423 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 SESTD1Q86VW0 696 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 OR6B3Q8NGW1 331 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 ZNF560Q96MR9 790 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms