RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 MICAL2O94851 1124 aa12.45□□□□□ -0.42
PDPN-211ENST00000617617 ALDH2P05091 517 aa12.45□□□□□ -0.42
PDPN-211ENST00000617617 SCNN1AP37088 669 aa12.45□□□□□ -0.42
PDPN-211ENST00000617617 GPD2P43304 727 aa12.45□□□□□ -0.42
PDPN-211ENST00000617617 NSFP46459 744 aaKnown RBP12.45□□□□□ -0.42
PDPN-211ENST00000617617 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.45□□□□□ -0.42
PDPN-211ENST00000617617 ANKRD52Q8NB46 1076 aa12.45□□□□□ -0.42
PDPN-211ENST00000617617 B3GALNT2Q8NCR0 500 aa12.45□□□□□ -0.42
PDPN-211ENST00000617617 SP7Q8TDD2 431 aaPredicted RBP12.45□□□□□ -0.42
PDPN-211ENST00000617617 CYFIP2Q96F07 1278 aa12.45□□□□□ -0.42
PDPN-211ENST00000617617 HEXIM2Q96MH2 286 aaKnown RBP12.45□□□□□ -0.42
PDPN-211ENST00000617617 FGBP02675 491 aa12.45□□□□□ -0.42
PDPN-211ENST00000617617 SLC11A1P49279 550 aa12.45□□□□□ -0.42
PDPN-211ENST00000617617 MAPRE1Q15691 268 aaKnown RBP12.45□□□□□ -0.42
PDPN-211ENST00000617617 PLEKHA7Q6IQ23 1121 aa12.45□□□□□ -0.42
PDPN-211ENST00000617617 NOX5Q96PH1 765 aa12.45□□□□□ -0.42
PDPN-211ENST00000617617 LZTFL1Q9NQ48 299 aa12.45□□□□□ -0.42
PDPN-211ENST00000617617 WDR35Q9P2L0 1181 aa12.45□□□□□ -0.42
PDPN-211ENST00000617617 DNAJB4Q9UDY4 337 aa12.45□□□□□ -0.42
PDPN-211ENST00000617617 STRIP2Q9ULQ0 834 aa12.45□□□□□ -0.42
PDPN-211ENST00000617617 TBC1D4O60343 1298 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 ABL1P00519 1130 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 CFHP08603 1231 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 PTPN1P18031 435 aaKnown RBP12.44□□□□□ -0.42
PDPN-211ENST00000617617 IGFBP6P24592 240 aaPredicted RBP12.44□□□□□ -0.42
PDPN-211ENST00000617617 TAP1Q03518 808 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 TUBB2AQ13885 445 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 TMEM240Q5SV17 173 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 DENND1BQ6P3S1 775 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 LRRC57Q8N9N7 239 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 MSANTD4Q8NCY6 345 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 SLC9A7Q96T83 725 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 TUBB2BQ9BVA1 445 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 SLC4A5Q9BY07 1137 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 THAP2Q9H0W7 228 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 SALL4Q9UJQ4 1053 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 FAN1Q9Y2M0 1017 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 SF3B1O75533 1304 aaKnown RBP eCLIP12.44□□□□□ -0.42
PDPN-211ENST00000617617 CLSTN1O94985 981 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 LMO2P25791 158 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 BCAT1P54687 386 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 BCAR1P56945 870 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 SNX16P57768 344 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 INTS6LQ5JSJ4 861 aaKnown RBP12.44□□□□□ -0.42
PDPN-211ENST00000617617 PPP1R26Q5T8A7 1209 aaPredicted RBP12.44□□□□□ -0.42
PDPN-211ENST00000617617 NAA35Q5VZE5 725 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 C11orf63Q6NUN7 778 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 ACOT1Q86TX2 421 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 GPIHBP1Q8IV16 184 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 THEM5Q8N1Q8 247 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 MYCBPAPQ8TBZ2 947 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 SLC35F5Q8WV83 523 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 BADQ92934 168 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 ABCB6Q9NP58 842 aa12.44□□□□□ -0.42
PDPN-211ENST00000617617 DDX43Q9NXZ2 648 aaKnown RBP12.44□□□□□ -0.42
PDPN-211ENST00000617617 ITGB1P05556 798 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 TNNT1P13805 278 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 LAG3P18627 525 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 PLA2G4AP47712 749 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 GATMP50440 423 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 DEFB103AP81534 67 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 SMARCB1Q12824 385 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 ZNF268Q14587 947 aaPredicted RBP12.43□□□□□ -0.42
PDPN-211ENST00000617617 ZNF394Q53GI3 561 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 PPP1R15BQ5SWA1 713 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 LIN9Q5TKA1 542 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 ARCQ7LC44 396 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 ZDHHC17Q8IUH5 632 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 SCML4Q8N228 414 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 TPCN2Q8NHX9 752 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 KCTD13Q8WZ19 329 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 SYT15Q9BQS2 421 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 ZCWPW1Q9H0M4 648 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 DPEP3Q9H4B8 488 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 CACNG4Q9UBN1 327 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 TRIM10Q9UDY6 481 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 TSPAN16Q9UKR8 245 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 PAXBP1Q9Y5B6 917 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 SCINQ9Y6U3 715 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 OR6C75A6NL08 312 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 CALCAP01258 141 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 CD19P15391 556 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 PRLRP16471 622 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 BRCC3P46736 316 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 OR1G1P47890 313 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 BST2Q10589 180 aaKnown RBP12.43□□□□□ -0.42
PDPN-211ENST00000617617 KIAA0319Q5VV43 1072 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 TMEM110Q86TL2 294 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 C16orf45Q96MC5 204 aaPredicted RBP12.43□□□□□ -0.42
PDPN-211ENST00000617617 ALS2CR12Q96Q35 445 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 CSNK1G1Q9HCP0 422 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 MRPL47Q9HD33 250 aaKnown RBP12.43□□□□□ -0.42
PDPN-211ENST00000617617 PNPLA8Q9NP80 782 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 CRTAC1Q9NQ79 661 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 SEPT11Q9NVA2 429 aaKnown RBP12.43□□□□□ -0.42
PDPN-211ENST00000617617 GUCA1BQ9UMX6 200 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 DUSP10Q9Y6W6 482 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 MYO16Q9Y6X6 1858 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 GOLGA7BQ2TAP0 167 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 OVOS1Q6IE37 1185 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms