RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 MYCBPAPQ8TBZ2 947 aa16.63■□□□□ 0.25
PCDHGC3-204ENST00000617222 CPLX3Q8WVH0 158 aa16.63■□□□□ 0.25
PCDHGC3-204ENST00000617222 PPP2R3CQ969Q6 453 aa16.63■□□□□ 0.25
PCDHGC3-204ENST00000617222 PGLYRP2Q96PD5 576 aa16.63■□□□□ 0.25
PCDHGC3-204ENST00000617222 SPAG5Q96R06 1193 aa16.63■□□□□ 0.25
PCDHGC3-204ENST00000617222 PKMYT1Q99640 499 aa16.63■□□□□ 0.25
PCDHGC3-204ENST00000617222 GPR88Q9GZN0 384 aa16.63■□□□□ 0.25
PCDHGC3-204ENST00000617222 DNAI2Q9GZS0 605 aa16.63■□□□□ 0.25
PCDHGC3-204ENST00000617222 IGFLR1Q9H665 355 aa16.63■□□□□ 0.25
PCDHGC3-204ENST00000617222 CNTN6Q9UQ52 1028 aa16.63■□□□□ 0.25
PCDHGC3-204ENST00000617222 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.63■□□□□ 0.25
PCDHGC3-204ENST00000617222 ITIH6Q6UXX5 1313 aa16.63■□□□□ 0.25
PCDHGC3-204ENST00000617222 CHD9Q3L8U1 2897 aa16.63■□□□□ 0.25
PCDHGC3-204ENST00000617222 CYP26A1O43174 497 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 TGM5O43548 720 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 ABLIM3O94929 683 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 ADCY5O95622 1261 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 CALCAP01258 141 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 SPATA31D3P0C874 917 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 CD19P15391 556 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 GTF2F1P35269 517 aaKnown RBP eCLIP16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 ZNF132P52740 706 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 JAM2P57087 298 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 NFE2Q16621 373 aaPredicted RBP16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 DUSP6Q16828 381 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 FIGNQ5HY92 759 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 TPGS2Q68CL5 300 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 SPECC1LQ69YQ0 1117 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 LILRA6Q6PI73 481 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 SPATA31D4Q6ZUB0 917 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 TMC6Q7Z403 805 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 PPFIBP1Q86W92 1011 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 FAM71AQ8IYT1 594 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 MICALL1Q8N3F8 863 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 C12orf29Q8N999 325 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 ATAD1Q8NBU5 361 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 MRFAP1L1Q96HT8 127 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 GUCD1Q96NT3 240 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 EDEM3Q9BZQ6 932 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 TTYH3Q9C0H2 523 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 MTMR10Q9NXD2 777 aa16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 AFF4Q9UHB7 1163 aaKnown RBP16.62■□□□□ 0.25
PCDHGC3-204ENST00000617222 F8VZ95 297 aa16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 GLUD1P00367 558 aa16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 PAEPP09466 180 aa16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 SOX5P35711 763 aa16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 STAT1P42224 750 aa16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 CLCN4P51793 760 aa16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 CYP27A1Q02318 531 aa16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 ADCY1Q08828 1119 aa16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 HYAL1Q12794 435 aa16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 GSE1Q14687 1217 aa16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 MAPRE1Q15691 268 aaKnown RBP16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 LLGL2Q6P1M3 1020 aa16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 SPATA2LQ8IUW3 424 aaPredicted RBP16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 GPIHBP1Q8IV16 184 aa16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 SLC22A17Q8WUG5 538 aa16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 BAP1Q92560 729 aa16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 MYLPFQ96A32 169 aa16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 CYFIP2Q96F07 1278 aa16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 PCED1BQ96HM7 432 aa16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 CDCA3Q99618 268 aaPredicted RBP16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 B3GNT5Q9BYG0 378 aa16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 ACP6Q9NPH0 428 aa16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 FAM49BQ9NUQ9 324 aa16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 ABI2Q9NYB9 513 aaPredicted RBP16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 PCDHB5Q9Y5E4 795 aa16.61■□□□□ 0.25
PCDHGC3-204ENST00000617222 MTMR11A4FU01 709 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 CLDN5O00501 218 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 GFPT2O94808 682 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 VNN2O95498 520 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 VDRP11473 427 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 CCDC130P13994 396 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 ATF2P15336 505 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 EPCAMP16422 314 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 ELF1P32519 619 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 CLCN1P35523 988 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 SMARCB1Q12824 385 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 DUSP4Q13115 394 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 SGO2Q562F6 1265 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 SMYD5Q6GMV2 418 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 C4orf50Q6ZRC1 276 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 KREMEN2Q8NCW0 462 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 TFAP2BQ92481 460 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 IQCDQ96DY2 449 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 MED10Q9BTT4 135 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 CYP4F11Q9HBI6 524 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 KIAA1257Q9ULG3 409 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 CAPN11Q9UMQ6 739 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 SLC27A5Q9Y2P5 690 aa16.6■□□□□ 0.25
PCDHGC3-204ENST00000617222 COL4A4P53420 1690 aaPredicted RBP16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 A0A1W2PQJ5 194 aa16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 SEC24AO95486 1093 aa16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 GYPCP04921 128 aa16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 FOSL2P15408 326 aa16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 BRD2P25440 801 aaKnown RBP16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 ADORA2BP29275 332 aa16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 CASP14P31944 242 aa16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 RBM10P98175 930 aaKnown RBP16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 PTK2Q05397 1052 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms