RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 RASGEF1CQ8N431 466 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 UBL4BQ8N7F7 174 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 UBE2Q2Q8WVN8 375 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 C1orf54Q8WWF1 131 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 CASKIN2Q8WXE0 1202 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 ATG4AQ8WYN0 398 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 RIN2Q8WYP3 895 aaPredicted RBP8.25□□□□□ -1.09
NEK3-207ENST00000617054 B3GNT5Q9BYG0 378 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 TSPAN16Q9UKR8 245 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 BARX2Q9UMQ3 279 aaPredicted RBP8.25□□□□□ -1.09
NEK3-207ENST00000617054 F8W810 466 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 POMCP01189 267 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 CCDC130P13994 396 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 HADHBP55084 474 aaKnown RBP8.25□□□□□ -1.09
NEK3-207ENST00000617054 PSMC1P62191 440 aaKnown RBP8.25□□□□□ -1.09
NEK3-207ENST00000617054 CDC42EP1Q00587 391 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 ADCY2Q08462 1091 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 CASP8Q14790 479 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 KAZNQ674X7 775 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 PLEKHA7Q6IQ23 1121 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 TAF2Q6P1X5 1199 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 SERINC5Q86VE9 423 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 SCUBE3Q8IX30 993 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 NME8Q8N427 588 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 ZNF784Q8NCA9 323 aaPredicted RBP8.25□□□□□ -1.09
NEK3-207ENST00000617054 GSTCDQ8NEC7 633 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 KLHDC9Q8NEP7 349 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 BEST2Q8NFU1 509 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 FEZF2Q8TBJ5 459 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 SENP6Q9GZR1 1112 aaPredicted RBP8.25□□□□□ -1.09
NEK3-207ENST00000617054 CNTN3Q9P232 1028 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 DDX20Q9UHI6 824 aaKnown RBP8.25□□□□□ -1.09
NEK3-207ENST00000617054 INPP5FQ9Y2H2 1132 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 PCDHA3Q9Y5H8 950 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 CASTOR2A6NHX0 329 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 A8MXQ7 604 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 KPNA7A9QM74 516 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 POLR3GO15318 223 aaPredicted RBP8.25□□□□□ -1.09
NEK3-207ENST00000617054 MTA2O94776 668 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 INHAP05111 366 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 KRT10P13645 584 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 ADORA2BP29275 332 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 ATICP31939 592 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 CTNNA1P35221 906 aaKnown RBP8.25□□□□□ -1.09
NEK3-207ENST00000617054 SCNN1GP51170 649 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 ACLYP53396 1101 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 DNAJC24Q6P3W2 148 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 MTERF4Q7Z6M4 381 aaKnown RBP8.25□□□□□ -1.09
NEK3-207ENST00000617054 PRUNE1Q86TP1 453 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 NDRG1Q92597 394 aaKnown RBP8.25□□□□□ -1.09
NEK3-207ENST00000617054 RPS6KC1Q96S38 1066 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 NT5C1AQ9BXI3 368 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 CARD9Q9H257 536 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 FAM105AQ9NUU6 356 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 PARVAQ9NVD7 372 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 RNF14Q9UBS8 474 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 TRPV2Q9Y5S1 764 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 DAPK3O43293 454 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 GPD2P43304 727 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 CLCNKBP51801 687 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 RWDD2BP57060 319 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 PPARDQ03181 441 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 SGO2Q562F6 1265 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 FBXO47Q5MNV8 452 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 CCDC70Q6NSX1 233 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 PMF1Q6P1K2 205 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 TTC27Q6P3X3 843 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 SND1Q7KZF4 910 aaKnown RBP eCLIP8.24□□□□□ -1.09
NEK3-207ENST00000617054 PRELID2Q8N945 189 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 MIS12Q9H081 205 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 UPF3AQ9H1J1 476 aaKnown RBP8.24□□□□□ -1.09
NEK3-207ENST00000617054 WNT8AQ9H1J5 351 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 NEUROG2Q9H2A3 272 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 PLEKHA5Q9HAU0 1116 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 METTL5Q9NRN9 209 aaKnown RBP8.24□□□□□ -1.09
NEK3-207ENST00000617054 PCSK1NQ9UHG2 260 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.24□□□□□ -1.09
NEK3-207ENST00000617054 ATP8B3O60423 1300 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 A0A0U1RQG5 324 aaPredicted RBP8.24□□□□□ -1.09
NEK3-207ENST00000617054 TMEM191CA6NGB0 347 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 E5RJQ4 531 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 CLDN5O00501 218 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 ERLIN1O75477 346 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 PROSCO94903 275 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 HMGCRP04035 888 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 PFKMP08237 780 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 RARAP10276 462 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 P4HA1P13674 534 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 FLT3P36888 993 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 LILRA4P59901 499 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 C1QBPQ07021 282 aaKnown RBP8.24□□□□□ -1.09
NEK3-207ENST00000617054 HLTFQ14527 1009 aaKnown RBP eCLIP8.24□□□□□ -1.09
NEK3-207ENST00000617054 CDO1Q16878 200 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 GOLGA7BQ2TAP0 167 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 TRIM72Q6ZMU5 477 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 AGMOQ6ZNB7 445 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 TTC30AQ86WT1 665 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 C3orf58Q8NDZ4 430 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 CLEC4CQ8WTT0 213 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 HAUS1Q96CS2 278 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms