RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 SDCCAG8Q86SQ7 713 aaPredicted RBP13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 TRIM42Q8IWZ5 723 aa13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 PRELID2Q8N945 189 aa13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 ALG13Q9NP73 1137 aaKnown RBP13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 CPA4Q9UI42 421 aa13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 LAMA4Q16363 1823 aa13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 ARHGEF37A1IGU5 675 aa13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 USP2O75604 605 aaPredicted RBP13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 FARP2O94887 1054 aaPredicted RBP13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 RCN2Q14257 317 aa13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 MFSD7Q6UXD7 560 aa13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 CYTH2Q99418 400 aa13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 DCLK3Q9C098 648 aa13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 SIK2Q9H0K1 926 aa13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 DCTN4Q9UJW0 460 aa13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 PPME1Q9Y570 386 aa13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 CCDC88AQ3V6T2 1871 aa13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 PLCH1Q4KWH8 1693 aa13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 PCK1P35558 622 aa13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 PID1Q7Z2X4 250 aa13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 SEC16BQ96JE7 1060 aa13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 SLC13A1Q9BZW2 595 aa13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 GBA2Q9HCG7 927 aaPredicted RBP13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 F8VP50 259 aa13.83□□□□□ -0.19
PPP4R3B-206ENST00000616407 ZFXP17010 805 aaPredicted RBP13.83□□□□□ -0.19
PPP4R3B-206ENST00000616407 SULT1E1P49888 294 aa13.83□□□□□ -0.19
PPP4R3B-206ENST00000616407 NAA25Q14CX7 972 aa13.83□□□□□ -0.19
PPP4R3B-206ENST00000616407 MFSD14CQ5VZR4 134 aa13.83□□□□□ -0.19
PPP4R3B-206ENST00000616407 LLGL2Q6P1M3 1020 aa13.83□□□□□ -0.19
PPP4R3B-206ENST00000616407 CEP120Q8N960 986 aa13.83□□□□□ -0.19
PPP4R3B-206ENST00000616407 MYCBPAPQ8TBZ2 947 aa13.83□□□□□ -0.19
PPP4R3B-206ENST00000616407 ACTL9Q8TC94 416 aa13.83□□□□□ -0.19
PPP4R3B-206ENST00000616407 XPNPEP1Q9NQW7 623 aa13.83□□□□□ -0.19
PPP4R3B-206ENST00000616407 UBQLN1Q9UMX0 589 aaKnown RBP13.83□□□□□ -0.19
PPP4R3B-206ENST00000616407 COL16A1Q07092 1604 aaPredicted RBP13.83□□□□□ -0.19
PPP4R3B-206ENST00000616407 TIAM2Q8IVF5 1701 aa13.83□□□□□ -0.19
PPP4R3B-206ENST00000616407 LGALS2P05162 132 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 CTCFP49711 727 aaPredicted RBP13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 TMPRSS15P98073 1019 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 MCL1Q07820 350 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 GRIK4Q16099 956 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 DCAF4L1Q3SXM0 396 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 BOLA3Q53S33 107 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 THEM5Q8N1Q8 247 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 KLF6Q99612 283 aaPredicted RBP13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 BTBD7Q9P203 1132 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 PABPN1LA6NDY0 278 aaKnown RBP13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 H3BRJ5 948 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 RPS6KA5O75582 802 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 SRGAP2BP0DMP2 458 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 MCF2P10911 925 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 PPIL2Q13356 520 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 DCAF6Q58WW2 860 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 JADE1Q6IE81 842 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 GBP7Q8N8V2 638 aaPredicted RBP13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 LRRC57Q8N9N7 239 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 HELQQ8TDG4 1101 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 PPP1R13LQ8WUF5 828 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 RAPGEF5Q92565 580 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 MAML1Q92585 1016 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 KATNAL1Q9BW62 490 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 FAM129AQ9BZQ8 928 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 GPATCH2LQ9NWQ4 482 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 SNTG2Q9NY99 539 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 AFG3L2Q9Y4W6 797 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 ATP8B3O60423 1300 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 NWD2Q9ULI1 1742 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 GRIN3BO60391 1043 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 ADSSP30520 456 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 SESN2P58004 480 aaPredicted RBP13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 TTMPQ5BVD1 217 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 RXFP2Q8WXD0 754 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 CYP3A43Q9HB55 503 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 ARHGAP28Q9P2N2 729 aa13.83□□□□□ -0.2
PPP4R3B-206ENST00000616407 A0A0B4J269 797 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 ARHGAP42A6NI28 874 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 B4GALT5O43286 388 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 STRNO43815 780 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 LPXNO60711 386 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 TNFRSF8P28908 595 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 NDST1P52848 882 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 ATP13A4Q4VNC1 1196 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 FAXCQ5TGI0 409 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 EEF1DP3Q658K8 133 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 SERPINB12Q96P63 405 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 ACO2Q99798 780 aaKnown RBP13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 PDGFCQ9NRA1 345 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 SENP1Q9P0U3 644 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 KIAA1257Q9ULG3 409 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 COG5Q9UP83 839 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 TAF6P49848 677 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 TSPY1Q01534 308 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 MAMLD1Q13495 774 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 MAP7D1Q3KQU3 841 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 ZBTB41Q5SVQ8 909 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 TRIM55Q9BYV6 548 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 ASB7Q9H672 318 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 RNF19AQ9NV58 838 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 USP18Q9UMW8 372 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 ANKRD36CQ5JPF3 1778 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms