RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 FAM163BP0C2L3 166 aa12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 CCDC192P0DO97 292 aa12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 MTHFRP42898 656 aa12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 RAP1GAPP47736 663 aa12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 FMO5P49326 533 aa12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 CDH8P55286 799 aa12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 NOP14P78316 857 aaKnown RBP12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 CCDC142Q17RM4 750 aa12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 CT47A1Q5JQC4 288 aaPredicted RBP12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 CYP26C1Q6V0L0 522 aa12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 SCARA5Q6ZMJ2 495 aa12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 RIPOR3Q96MK2 946 aa12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 NECTIN4Q96NY8 510 aa12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 PHF7Q9BWX1 381 aaPredicted RBP12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 IMPG2Q9BZV3 1241 aa12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 RAB20Q9NX57 234 aa12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 PRKAG3Q9UGI9 489 aa12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 GTF3C4Q9UKN8 822 aa12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 SLC27A5Q9Y2P5 690 aa12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 NOTCH4Q99466 2003 aa12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 PTPRDP23468 1912 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 MYBPHLA2RUH7 354 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 PMM2O15305 246 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 ATP2C2O75185 946 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 POU2F2P09086 479 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 PDGFRBP09619 1106 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 P4HA1P13674 534 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 PCSK1P29120 753 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 GNL1P36915 607 aaPredicted RBP12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 PSMC1P62191 440 aaKnown RBP12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 TSPY1Q01534 308 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 ZP2Q05996 745 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 SMARCB1Q12824 385 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 FAM171BQ6P995 826 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 C11orf57Q6ZUT1 292 aaPredicted RBP12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 ADHFE1Q8IWW8 467 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 DCP1BQ8IZD4 617 aaKnown RBP12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 OR6B3Q8NGW1 331 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 CNOT6LQ96LI5 555 aaKnown RBP12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 SYT15Q9BQS2 421 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 BCO2Q9BYV7 579 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 SNX25Q9H3E2 840 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 DPEP3Q9H4B8 488 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 PIDD1Q9HB75 910 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 WDR6Q9NNW5 1121 aaKnown RBP12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 CRTAC1Q9NQ79 661 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 ANO10Q9NW15 660 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 HSFX1Q9UBD0 423 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 CDH9Q9ULB4 789 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 YIPF1Q9Y548 306 aa12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.1□□□□□ -0.47
CCL3L3-201ENST00000612839 A8MXQ7 604 aa12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 SOAT2O75908 522 aa12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 LRG1P02750 347 aa12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 PTMSP20962 102 aa12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 TWF1Q12792 350 aa12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 KCNH2Q12809 1159 aa12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 NFE2Q16621 373 aaPredicted RBP12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 STX1AQ16623 288 aa12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 TPD52L1Q16890 204 aaPredicted RBP12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 GRASPQ7Z6J2 395 aaPredicted RBP12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 ENOX1Q8TC92 643 aaKnown RBP12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 SPPL2BQ8TCT7 592 aa12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 C2orf15Q8WU43 125 aaKnown RBP12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 UHRF1Q96T88 793 aaPredicted RBP12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 COL25A1Q9BXS0 654 aaPredicted RBP12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 NIF3L1Q9GZT8 377 aa12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 THAP9Q9H5L6 903 aa12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 CD320Q9NPF0 282 aa12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 HCFC1R1Q9NWW0 138 aa12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 ABI2Q9NYB9 513 aaPredicted RBP12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 CEP72Q9P209 647 aa12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 DNMT3BQ9UBC3 853 aaKnown RBP12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 CLUHO75153 1309 aa12.09□□□□□ -0.47
CCL3L3-201ENST00000612839 XYLBO75191 536 aa12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 AFPP02771 609 aaKnown RBP12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 ATF6P18850 670 aa12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 SP100P23497 879 aaPredicted RBP12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 NTHL1P78549 312 aa12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 TYRO3Q06418 890 aa12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 MGAT5BQ3V5L5 792 aa12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 HSP90AA4PQ58FG1 418 aa12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 CREBRFQ8IUR6 639 aa12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 CCDC150Q8NCX0 1101 aa12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 LMO3Q8TAP4 145 aa12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 TATDN2Q93075 761 aa12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 PCED1BQ96HM7 432 aa12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 FAXDC2Q96IV6 333 aa12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 RPGRIP1Q96KN7 1286 aa12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 SEPT5Q99719 369 aaPredicted RBP12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 ARID3AQ99856 593 aa12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 LPIN3Q9BQK8 851 aa12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 DNAJC25Q9H1X3 360 aa12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 SAMSN1Q9NSI8 373 aaKnown RBP12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 HMGXB4Q9UGU5 601 aa12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 NFE2L3Q9Y4A8 694 aa12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 PCDHB5Q9Y5E4 795 aa12.08□□□□□ -0.47
CCL3L3-201ENST00000612839 DOCK8Q8NF50 2099 aa12.08□□□□□ -0.48
CCL3L3-201ENST00000612839 LOC730098B7Z3J9 87 aa12.08□□□□□ -0.48
CCL3L3-201ENST00000612839 P4HA2O15460 535 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms