RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 GPC2Q8N158 579 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 ASCC2Q9H1I8 757 aaPredicted RBP6.69□□□□□ -1.34
SNX13-213ENST00000611725 CYP3A43Q9HB55 503 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 PRM3Q9NNZ6 103 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 SLC40A1Q9NP59 571 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 ZDHHC18Q9NUE0 388 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 KIAA1257Q9ULG3 409 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 GOLGA8RI6L899 631 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 DYNC1LI2O43237 492 aaPredicted RBP6.69□□□□□ -1.34
SNX13-213ENST00000611725 APRTP07741 180 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 TMPRSS15P98073 1019 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 POU5F1Q01860 360 aaKnown RBP6.69□□□□□ -1.34
SNX13-213ENST00000611725 TSNAXIP1Q2TAA8 658 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 HEATR6Q6AI08 1181 aaKnown RBP6.69□□□□□ -1.34
SNX13-213ENST00000611725 C3orf62Q6ZUJ4 267 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 PARP9Q8IXQ6 854 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 DDX27Q96GQ7 796 aaKnown RBP6.69□□□□□ -1.34
SNX13-213ENST00000611725 FHDC1Q9C0D6 1143 aaPredicted RBP6.69□□□□□ -1.34
SNX13-213ENST00000611725 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.69□□□□□ -1.34
SNX13-213ENST00000611725 ZC3H7BQ9UGR2 993 aaKnown RBP6.69□□□□□ -1.34
SNX13-213ENST00000611725 RGS20O76081 388 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 VDRP11473 427 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 ZBTB41Q5SVQ8 909 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 BZW1Q7L1Q6 419 aaKnown RBP6.69□□□□□ -1.34
SNX13-213ENST00000611725 C12orf50Q8NA57 414 aaPredicted RBP6.69□□□□□ -1.34
SNX13-213ENST00000611725 UBA3Q8TBC4 463 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 TRPM4Q8TD43 1214 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 TBCBQ99426 244 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 FRMD8Q9BZ67 464 aaPredicted RBP6.69□□□□□ -1.34
SNX13-213ENST00000611725 YY1AP1Q9H869 796 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 UMODL1Q5DID0 1318 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 H3BRB1 525 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 SPAG6O75602 509 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 FARP2O94887 1054 aaPredicted RBP6.69□□□□□ -1.34
SNX13-213ENST00000611725 CYP1A1P04798 512 aaPredicted RBP6.69□□□□□ -1.34
SNX13-213ENST00000611725 ADORA2BP29275 332 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 PLCB4Q15147 1175 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 CYB5D1Q6P9G0 228 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 ZDHHC24Q6UX98 284 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 DNAAF3Q8N9W5 541 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 GPRC5AQ8NFJ5 357 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 WNK4Q96J92 1243 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 RAB3IPQ96QF0 476 aaPredicted RBP6.69□□□□□ -1.34
SNX13-213ENST00000611725 CDT1Q9H211 546 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 TUT1Q9H6E5 874 aaKnown RBP6.69□□□□□ -1.34
SNX13-213ENST00000611725 ALG13Q9NP73 1137 aaKnown RBP6.69□□□□□ -1.34
SNX13-213ENST00000611725 TIAM2Q8IVF5 1701 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 CNTNAP1P78357 1384 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 PEX10O60683 326 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 HAUS5O94927 633 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 ZWINTO95229 277 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 MCF2P10911 925 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 TNFSF9P41273 254 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 CTCFP49711 727 aaPredicted RBP6.68□□□□□ -1.34
SNX13-213ENST00000611725 IRX4P78413 519 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 ZNF268Q14587 947 aaPredicted RBP6.68□□□□□ -1.34
SNX13-213ENST00000611725 ZNF484Q5JVG2 852 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 SYCP2LQ5T4T6 812 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 TWF2Q6IBS0 349 aaKnown RBP6.68□□□□□ -1.34
SNX13-213ENST00000611725 EXOC3L1Q86VI1 746 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 ZNF526Q8TF50 670 aaPredicted RBP6.68□□□□□ -1.34
SNX13-213ENST00000611725 CENPTQ96BT3 561 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 ZNF560Q96MR9 790 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 PWWP2AQ96N64 755 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 APOBEC3GQ9HC16 384 aaKnown RBP6.68□□□□□ -1.34
SNX13-213ENST00000611725 METTL5Q9NRN9 209 aaKnown RBP6.68□□□□□ -1.34
SNX13-213ENST00000611725 BFARQ9NZS9 450 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 PAEPP09466 180 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 GPD1P21695 349 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 SCTRP47872 440 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 ARFIP2P53365 341 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 CDH8P55286 799 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 SNAPC2Q13487 334 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 SLC39A4Q6P5W5 647 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 PAXIP1Q6ZW49 1069 aaPredicted RBP6.68□□□□□ -1.34
SNX13-213ENST00000611725 MICAL1Q8TDZ2 1067 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 SEC14L1Q92503 715 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 SEPT10Q9P0V9 454 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 PAK5Q9P286 719 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 TNFSF13BQ9Y275 285 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 PIK3R2O00459 728 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 B4GALT5O43286 388 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 SNX3O60493 162 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 CYP2C9P11712 490 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 GPR162Q16538 588 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 C1orf220Q5T0J3 134 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 DCAF12L1Q5VU92 463 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 MFSD5Q6N075 450 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 SMC1BQ8NDV3 1235 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 TLCD1Q96CP7 247 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 TNIP3Q96KP6 325 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 MED10Q9BTT4 135 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 AP5M1Q9H0R1 490 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 SPC25Q9HBM1 224 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 NOP53Q9NZM5 478 aaKnown RBP6.68□□□□□ -1.34
SNX13-213ENST00000611725 SLC24A2Q9UI40 661 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 LAMB4A4D0S4 1761 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 AFDNP55196 1824 aaKnown RBP6.68□□□□□ -1.34
SNX13-213ENST00000611725 ZSCAN5DPP0CG00 497 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 UNGP13051 313 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms