RNA–Protein interactions for RNA: ENST00000607559.1

TPM2-208, Transcript of tropomyosin 2, human

TSL 2

Gene TPM2, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM2-208	ENST00000607559	NKD2	Q969F2	451 aa	Predicted RBP	11.53	□□□□□ -0.56
TPM2-208	ENST00000607559	CLDN23	Q96B33	292 aa		11.53	□□□□□ -0.56
TPM2-208	ENST00000607559	PAGE5	Q96GU1	130 aa		11.53	□□□□□ -0.56
TPM2-208	ENST00000607559	CEP295NL	Q96MC4	621 aa		11.53	□□□□□ -0.56
TPM2-208	ENST00000607559	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.53	□□□□□ -0.56
TPM2-208	ENST00000607559	IL21	Q9HBE4	155 aa		11.53	□□□□□ -0.56
TPM2-208	ENST00000607559	OBP2A	Q9NY56	170 aa		11.53	□□□□□ -0.56
TPM2-208	ENST00000607559	L1RE1	Q9UN81	338 aa		11.53	□□□□□ -0.56
TPM2-208	ENST00000607559	SIT1	Q9Y3P8	196 aa		11.53	□□□□□ -0.56
TPM2-208	ENST00000607559	ATP6V1D	Q9Y5K8	247 aa		11.53	□□□□□ -0.56
TPM2-208	ENST00000607559	CEP250	Q9BV73	2442 aa		11.52	□□□□□ -0.56
TPM2-208	ENST00000607559		A0A1W2PQ27	194 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559		A0A1W2PQ64	194 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559		A0A1W2PQD8	194 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	GOLGA8IP	A6NC78	632 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	PRR23A	A6NEV1	266 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	GOLGA8J	A6NMD2	632 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	ARNTL	O00327	626 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	HUS1	O60921	280 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	HMGA1	P17096	107 aa	Known RBP	11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	PSMC3	P17980	439 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	ATF6	P18850	670 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	MAGEA9	P43362	315 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	RPS9	P46781	194 aa	Known RBP	11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	KRT85	P78386	507 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	FZD5	Q13467	585 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	ANGPT1	Q15389	498 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	MLF2	Q15773	248 aa	Predicted RBP	11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	CFAP221	Q4G0U5	840 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	SLC39A12	Q504Y0	691 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	HS2ST1	Q7LGA3	356 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	CEP57L1	Q8IYX8	460 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	XXYLT1	Q8NBI6	393 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	PJA1	Q8NG27	643 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	OR5B17	Q8NGF7	314 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	IRF7	Q92985	503 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	FUBP3	Q96I24	572 aa	Known RBP eCLIP	11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	ANKRD36BP1	Q96IX9	119 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	MYRFL	Q96LU7	910 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	PGLYRP2	Q96PD5	576 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	TRMT61B	Q9BVS5	477 aa	Known RBP	11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	SEMA4A	Q9H3S1	761 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	VRTN	Q9H8Y1	702 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	SERTAD1	Q9UHV2	236 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	CA14	Q9ULX7	337 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	SLC27A5	Q9Y2P5	690 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	PTPRJ	Q12913	1337 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	GPR179	Q6PRD1	2367 aa		11.52	□□□□□ -0.57
TPM2-208	ENST00000607559	CACNA1A	O00555	2505 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	ANK1	P16157	1881 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	PDXK	O00764	312 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	TACC1	O75410	805 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	CST3	P01034	146 aa	Predicted RBP	11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	F11	P03951	625 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	TMEM191B	P0C7N4	346 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	PCSK1	P29120	753 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	CASP1	P29466	404 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	MAGEA11	P43364	429 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	AP3M2	P53677	418 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	CYP24A1	Q07973	514 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	MYO1E	Q12965	1108 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	STK4	Q13043	487 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	SNW1	Q13573	536 aa	Known RBP	11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	NFIL3	Q16649	462 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	C6orf132	Q5T0Z8	1188 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	VIT	Q6UXI7	678 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	TRAPPC11	Q7Z392	1133 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	FRMD5	Q7Z6J6	570 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	TTC9B	Q8N6N2	239 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	HPDL	Q96IR7	371 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	SPATA32	Q96LK8	384 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	KXD1	Q9BQD3	176 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	MTMR12	Q9C0I1	747 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	BLZF1	Q9H2G9	400 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	KCTD10	Q9H3F6	313 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	ZNF334	Q9HCZ1	680 aa	Predicted RBP	11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	TMLHE	Q9NVH6	421 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	PCDHB5	Q9Y5E4	795 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559	SCN1A	P35498	2009 aa		11.51	□□□□□ -0.57
TPM2-208	ENST00000607559		A0A1B0GVL5	298 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	MAN2B1	O00754	1011 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	MAPK13	O15264	365 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	CHAD	O15335	359 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	MAP3K7	O43318	606 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	RHOBTB3	O94955	611 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	TNNC2	P02585	160 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	MYL4	P12829	197 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	PFKFB1	P16118	471 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	WARS	P23381	471 aa	Known RBP	11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	CDC25C	P30307	473 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	ATIC	P31939	592 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	MLLT3	P42568	568 aa	Predicted RBP	11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	AFM	P43652	599 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	MYL7	Q01449	175 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	TSPY1	Q01534	308 aa		11.5	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms