RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.24■□□□□ 0.03
CTSA-211ENST00000606066 HSFX1Q9UBD0 423 aa15.24■□□□□ 0.03
CTSA-211ENST00000606066 MYO7AQ13402 2215 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 CCDC195A0A1B0GUA6 201 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 GTPBP10A4D1E9 387 aaKnown RBP15.23■□□□□ 0.03
CTSA-211ENST00000606066 PDGFRBP09619 1106 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 CDK11BP21127 795 aaKnown RBP15.23■□□□□ 0.03
CTSA-211ENST00000606066 TBXAS1P24557 533 aaPredicted RBP15.23■□□□□ 0.03
CTSA-211ENST00000606066 ACAT1P24752 427 aaKnown RBP15.23■□□□□ 0.03
CTSA-211ENST00000606066 LMO2P25791 158 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 TUFMP49411 452 aaKnown RBP15.23■□□□□ 0.03
CTSA-211ENST00000606066 CDH8P55286 799 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 CLUL1Q15846 466 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 ATAT1Q5SQI0 421 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 RARS2Q5T160 578 aaKnown RBP15.23■□□□□ 0.03
CTSA-211ENST00000606066 TMC5Q6UXY8 1006 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 UNC93AQ86WB7 457 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 RNF135Q8IUD6 432 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 AOPEPQ8N6M6 819 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 C12orf76Q8N812 135 aaPredicted RBP15.23■□□□□ 0.03
CTSA-211ENST00000606066 EHBP1Q8NDI1 1231 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 SPPL2BQ8TCT7 592 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 EDAQ92838 391 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 ELMO3Q96BJ8 720 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 TNIP3Q96KP6 325 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 RIPOR3Q96MK2 946 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 NECTIN4Q96NY8 510 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 NT5C1BQ96P26 610 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 SYT15Q9BQS2 421 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 BCO2Q9BYV7 579 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 RHOBTB2Q9BYZ6 727 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 PRKD2Q9BZL6 878 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 S1PR5Q9H228 398 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 NDST4Q9H3R1 872 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 PCDHB5Q9Y5E4 795 aa15.23■□□□□ 0.03
CTSA-211ENST00000606066 MTMR11A4FU01 709 aa15.22■□□□□ 0.03
CTSA-211ENST00000606066 PES1O00541 588 aaKnown RBP15.22■□□□□ 0.03
CTSA-211ENST00000606066 XYLBO75191 536 aa15.22■□□□□ 0.03
CTSA-211ENST00000606066 LRG1P02750 347 aa15.22■□□□□ 0.03
CTSA-211ENST00000606066 WEE2P0C1S8 567 aa15.22■□□□□ 0.03
CTSA-211ENST00000606066 MTHFRP42898 656 aa15.22■□□□□ 0.03
CTSA-211ENST00000606066 RAP1GAPP47736 663 aa15.22■□□□□ 0.03
CTSA-211ENST00000606066 YWHAEP62258 255 aaKnown RBP15.22■□□□□ 0.03
CTSA-211ENST00000606066 TPM4P67936 248 aa15.22■□□□□ 0.03
CTSA-211ENST00000606066 DUSP4Q13115 394 aa15.22■□□□□ 0.03
CTSA-211ENST00000606066 PLD1Q13393 1074 aa15.22■□□□□ 0.03
CTSA-211ENST00000606066 FAM171BQ6P995 826 aa15.22■□□□□ 0.03
CTSA-211ENST00000606066 GBP6Q6ZN66 633 aa15.22■□□□□ 0.03
CTSA-211ENST00000606066 C4orf50Q6ZRC1 276 aa15.22■□□□□ 0.03
CTSA-211ENST00000606066 GPR149Q86SP6 731 aa15.22■□□□□ 0.03
CTSA-211ENST00000606066 LRRTM3Q86VH5 581 aa15.22■□□□□ 0.03
CTSA-211ENST00000606066 TATDN2Q93075 761 aa15.22■□□□□ 0.03
CTSA-211ENST00000606066 FAM81BQ96LP2 452 aa15.22■□□□□ 0.03
CTSA-211ENST00000606066 APOL5Q9BWW9 433 aa15.22■□□□□ 0.03
CTSA-211ENST00000606066 PIDD1Q9HB75 910 aa15.22■□□□□ 0.03
CTSA-211ENST00000606066 GTF3C4Q9UKN8 822 aa15.22■□□□□ 0.03
CTSA-211ENST00000606066 SCN1AP35498 2009 aa15.22■□□□□ 0.03
CTSA-211ENST00000606066 C5orf42Q9H799 3197 aa15.22■□□□□ 0.03
CTSA-211ENST00000606066 VWA8A3KMH1 1905 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 MYBPHLA2RUH7 354 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 LRRN2O75325 713 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 RFPL2O75678 378 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 PAPLNO95428 1278 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 SEC24AO95486 1093 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 POU2F2P09086 479 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 PTPN1P18031 435 aaKnown RBP15.21■□□□□ 0.03
CTSA-211ENST00000606066 ALDH1A3P47895 512 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 INCA1Q0VD86 236 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 LRMPQ12912 555 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 CUL2Q13617 745 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 NCAPHQ15003 741 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 EXOC3L4Q17RC7 722 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 MGAT5BQ3V5L5 792 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 SPATA2LQ8IUW3 424 aaPredicted RBP15.21■□□□□ 0.03
CTSA-211ENST00000606066 ELMOD1Q8N336 334 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 ATAD1Q8NBU5 361 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 B3GALNT2Q8NCR0 500 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 MYCBPAPQ8TBZ2 947 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 SMG7Q92540 1137 aaKnown RBP15.21■□□□□ 0.03
CTSA-211ENST00000606066 FUBP3Q96I24 572 aaKnown RBP eCLIP15.21■□□□□ 0.03
CTSA-211ENST00000606066 NT5C1AQ9BXI3 368 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 INTS2Q9H0H0 1204 aaKnown RBP15.21■□□□□ 0.03
CTSA-211ENST00000606066 SDCBP2Q9H190 292 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 ABCB6Q9NP58 842 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 ABI2Q9NYB9 513 aaPredicted RBP15.21■□□□□ 0.03
CTSA-211ENST00000606066 GCNT4Q9P109 453 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 INSL5Q9Y5Q6 135 aa15.21■□□□□ 0.03
CTSA-211ENST00000606066 ATG2AQ2TAZ0 1938 aa15.2■□□□□ 0.02
CTSA-211ENST00000606066 HCRTO43612 131 aa15.2■□□□□ 0.02
CTSA-211ENST00000606066 CD58P19256 250 aa15.2■□□□□ 0.02
CTSA-211ENST00000606066 NDST1P52848 882 aa15.2■□□□□ 0.02
CTSA-211ENST00000606066 PSMC1P62191 440 aaKnown RBP15.2■□□□□ 0.02
CTSA-211ENST00000606066 CBX2Q14781 532 aaPredicted RBP15.2■□□□□ 0.02
CTSA-211ENST00000606066 KRT31Q15323 416 aa15.2■□□□□ 0.02
CTSA-211ENST00000606066 CFAP221Q4G0U5 840 aa15.2■□□□□ 0.02
CTSA-211ENST00000606066 MIIPQ5JXC2 388 aa15.2■□□□□ 0.02
CTSA-211ENST00000606066 FKBP15Q5T1M5 1219 aa15.2■□□□□ 0.02
CTSA-211ENST00000606066 IQCEQ6IPM2 695 aa15.2■□□□□ 0.02
CTSA-211ENST00000606066 DHX40Q8IX18 779 aaKnown RBP15.2■□□□□ 0.02
CTSA-211ENST00000606066 CRYBG2Q8N1P7 616 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms