RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 C6orf229H3BNL8 230 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 P4HA2O15460 535 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 PROSCO94903 275 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 TGDSO95455 350 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 ADRB2P07550 413 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 UQCRBP14927 111 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 SSTR3P32745 418 aaPredicted RBP13.05□□□□□ -0.32
CDCA3-212ENST00000604599 HIRAP54198 1017 aaPredicted RBP13.05□□□□□ -0.32
CDCA3-212ENST00000604599 ALDH18A1P54886 795 aaKnown RBP13.05□□□□□ -0.32
CDCA3-212ENST00000604599 HPCAP84074 193 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 PLCB3Q01970 1234 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 MORF4L2Q15014 288 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 MMEL1Q495T6 779 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 MSS51Q4VC12 460 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 SH2D4BQ5SQS7 431 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 RNF111Q6ZNA4 994 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 NLRX1Q86UT6 975 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 HIPK4Q8NE63 616 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 TMEM121Q9BTD3 319 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 HSPBP1Q9NZL4 362 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 STK24Q9Y6E0 443 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 MT-ND3P03897 115 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 NCOA4Q13772 614 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 HNRNPDQ14103 355 aaKnown RBP13.05□□□□□ -0.32
CDCA3-212ENST00000604599 SHROOM1Q2M3G4 852 aaPredicted RBP13.05□□□□□ -0.32
CDCA3-212ENST00000604599 MFSD14BQ5SR56 506 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 ADGRD1Q6QNK2 874 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 RHPN2Q8IUC4 686 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 ARID3BQ8IVW6 561 aaPredicted RBP13.05□□□□□ -0.32
CDCA3-212ENST00000604599 DAW1Q8N136 415 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 XXYLT1Q8NBI6 393 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 HELQQ8TDG4 1101 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 SLC26A7Q8TE54 656 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 FAM172AQ8WUF8 416 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 SNRNP27Q8WVK2 155 aaKnown RBP13.05□□□□□ -0.32
CDCA3-212ENST00000604599 MECRQ9BV79 373 aa13.05□□□□□ -0.32
CDCA3-212ENST00000604599 ZNF395Q9H8N7 513 aaPredicted RBP13.05□□□□□ -0.32
CDCA3-212ENST00000604599 TOPORSQ9NS56 1045 aaPredicted RBP13.05□□□□□ -0.32
CDCA3-212ENST00000604599 A0A0J9YVX5 310 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 CCDC195A0A1B0GUA6 201 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 SMIM31A0A1B0GVY4 71 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 SMCHD1A6NHR9 2005 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 SGK1O00141 431 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 TCF4P15884 667 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 VCLP18206 1134 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 PDE1BQ01064 536 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 TMED1Q13445 227 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 PDK3Q15120 406 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 HSF5Q4G112 596 aaPredicted RBP13.04□□□□□ -0.32
CDCA3-212ENST00000604599 SLC10A5Q5PT55 438 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 RBM44Q6ZP01 1051 aaKnown RBP13.04□□□□□ -0.32
CDCA3-212ENST00000604599 OTOP1Q7RTM1 612 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 ALLCQ8N6M5 410 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 DCAKDQ8WVC6 231 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 ACSF2Q96CM8 615 aaPredicted RBP13.04□□□□□ -0.32
CDCA3-212ENST00000604599 CCDC124Q96CT7 223 aaKnown RBP13.04□□□□□ -0.32
CDCA3-212ENST00000604599 SERAC1Q96JX3 654 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 C11orf70Q9BRQ4 267 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 C10orf88Q9H8K7 445 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 GINM1Q9NU53 330 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 TAGLN3Q9UI15 199 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 SERPINB13Q9UIV8 391 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 GMEB1Q9Y692 573 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 PRR5-ARHGAP8B1AHC4 643 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 RGS2P41220 211 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 UBXN2AP68543 259 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 ARHGAP8P85298 464 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 NFX1Q12986 1120 aaKnown RBP13.04□□□□□ -0.32
CDCA3-212ENST00000604599 IKQ13123 557 aaPredicted RBP13.04□□□□□ -0.32
CDCA3-212ENST00000604599 CCDC142Q17RM4 750 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 DNAL1Q4LDG9 190 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 TMCO4Q5TGY1 634 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 ANKRD22Q5VYY1 191 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 CBWD2Q8IUF1 395 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 PASD1Q8IV76 773 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 ATP11CQ8NB49 1132 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 TAS1R2Q8TE23 839 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 USP6NLQ92738 828 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 PI4K2AQ9BTU6 479 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 PPCSQ9HAB8 311 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 S100A14Q9HCY8 104 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 TUFT1Q9NNX1 390 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 DDX4Q9NQI0 724 aaKnown RBP13.04□□□□□ -0.32
CDCA3-212ENST00000604599 DNAJB4Q9UDY4 337 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 ADAMTS6Q9UKP5 1117 aa13.04□□□□□ -0.32
CDCA3-212ENST00000604599 C15orf38-AP3S2A0A0A6YYH1 394 aa13.03□□□□□ -0.32
CDCA3-212ENST00000604599 ARHGEF35A5YM69 484 aa13.03□□□□□ -0.32
CDCA3-212ENST00000604599 PSTPIP1O43586 416 aa13.03□□□□□ -0.32
CDCA3-212ENST00000604599 SORBS2O94875 1100 aaKnown RBP13.03□□□□□ -0.32
CDCA3-212ENST00000604599 UNGP13051 313 aaPredicted RBP13.03□□□□□ -0.32
CDCA3-212ENST00000604599 PHBP35232 272 aa13.03□□□□□ -0.32
CDCA3-212ENST00000604599 ETV4P43268 484 aa13.03□□□□□ -0.32
CDCA3-212ENST00000604599 EPHB1P54762 984 aa13.03□□□□□ -0.32
CDCA3-212ENST00000604599 ALCAMQ13740 583 aa13.03□□□□□ -0.32
CDCA3-212ENST00000604599 UBAP2LQ14157 1087 aaKnown RBP13.03□□□□□ -0.32
CDCA3-212ENST00000604599 GRM2Q14416 872 aa13.03□□□□□ -0.32
CDCA3-212ENST00000604599 FNBP1LQ5T0N5 605 aa13.03□□□□□ -0.32
CDCA3-212ENST00000604599 FBXL19Q6PCT2 694 aa13.03□□□□□ -0.32
CDCA3-212ENST00000604599 TRMT1LQ7Z2T5 733 aaKnown RBP13.03□□□□□ -0.32
CDCA3-212ENST00000604599 ARPINQ7Z6K5 226 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms