RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 MAPKAPK3Q16644 382 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 FAM26FQ5R3K3 315 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 ZNF295-AS1Q8N0V1 137 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 NPLOC4Q8TAT6 608 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 TGFBRAP1Q8WUH2 860 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 DYDC1Q8WWB3 177 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 RAPGEF5Q92565 580 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 AHCYL2Q96HN2 611 aaKnown RBP5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 VCPIP1Q96JH7 1222 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 SMC6Q96SB8 1091 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 ZSCAN10Q96SZ4 725 aaPredicted RBP5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 TMEM120AQ9BXJ8 343 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 PUS3Q9BZE2 481 aaKnown RBP5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 FAM129AQ9BZQ8 928 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 FHDC1Q9C0D6 1143 aaPredicted RBP5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 OR10A4Q9H209 315 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 KIF17Q9P2E2 1029 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 CAMTA1Q9Y6Y1 1673 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 CCDC162PA2VCL2 907 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 LRRD1A4D1F6 860 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 RHOXF2BP0C7M4 288 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 HAAOP46952 286 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 CD97P48960 835 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 ZNF75DP51815 510 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 LRP8Q14114 963 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 ZNF827Q17R98 1081 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 ZNF792Q3KQV3 632 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 AARDQ4LEZ3 155 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 C1orf185Q5T7R7 199 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 NEPROQ6NW34 567 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 ZYG11AQ6WRX3 759 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 RAB44Q7Z6P3 723 aaPredicted RBP5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 SLITRK4Q8IW52 837 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 ALDH16A1Q8IZ83 802 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 CACNA2D3Q8IZS8 1091 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 CHTF18Q8WVB6 975 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 ZNF764Q96H86 408 aaPredicted RBP5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 MAELQ96JY0 434 aaKnown RBP5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 NLRP4Q96MN2 994 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 TESK2Q96S53 571 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 RHOXF2Q9BQY4 288 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 GOLPH3LQ9H4A5 285 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 VIPAS39Q9H9C1 493 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 CLK4Q9HAZ1 481 aaKnown RBP5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 DMAP1Q9NPF5 467 aaPredicted RBP5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 LCHNA4D1U4 455 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 PI4KAP2A4QPH2 592 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 TRIM43BA6NCK2 446 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 VWA5AO00534 786 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 CYTH3O43739 400 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 SLC25A17O43808 307 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 BUB1BO60566 1050 aaPredicted RBP5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 CAMTA2O94983 1202 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 PAMP19021 973 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 SLC16A2P36021 539 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 AARSP49588 968 aaKnown RBP eCLIP5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 CASP6P55212 293 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 BPIFB4P59827 614 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 TUBB4BP68371 445 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 GRM2Q14416 872 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 MXD4Q14582 209 aaPredicted RBP5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 STARD3Q14849 445 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 SGSM1Q2NKQ1 1148 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 CCDC153Q494R4 210 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 CFAP100Q494V2 611 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 C5orf22Q49AR2 442 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 PIK3R6Q5UE93 754 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 CYP4F22Q6NT55 531 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 MRPL14Q6P1L8 145 aaKnown RBP5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 DCLRE1AQ6PJP8 1040 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 TXNDC11Q6PKC3 985 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 LBX2Q6XYB7 198 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 IKBIPQ70UQ0 350 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 SULF2Q8IWU5 870 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 CCDC13Q8IYE1 715 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 FUKQ8N0W3 1084 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 PRR18Q8N4B5 295 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 RNF10Q8N5U6 811 aaKnown RBP5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 EFHBQ8N7U6 833 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 ANKRD53Q8N9V6 530 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 TMEM145Q8NBT3 493 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 CLRN3Q8NCR9 226 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 NSUN7Q8NE18 718 aaKnown RBP5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 FAM13CQ8NE31 585 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 PTP4A1Q93096 173 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 VPS33AQ96AX1 596 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 DHX58Q96C10 678 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 FAM167AQ96KS9 214 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 ZDHHC15Q96MV8 337 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 TRAPPC9Q96Q05 1148 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 CCT7Q99832 543 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 CENPHQ9H3R5 247 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 RUBCNLQ9H714 662 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 WASH6PQ9NQA3 447 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 TBCCD1Q9NVR7 557 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 RASAL2Q9UJF2 1139 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 BCS1LQ9Y276 419 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 MYOM1P52179 1685 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 AQP12BA6NM10 295 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 E2F3O00716 465 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms