RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 JAKMIP2Q96AA8 810 aa14.81□□□□□ -0.04
RNF40-212ENST00000602784 FUBP3Q96I24 572 aaKnown RBP eCLIP14.81□□□□□ -0.04
RNF40-212ENST00000602784 PRKD2Q9BZL6 878 aa14.81□□□□□ -0.04
RNF40-212ENST00000602784 INTS2Q9H0H0 1204 aaKnown RBP14.81□□□□□ -0.04
RNF40-212ENST00000602784 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.81□□□□□ -0.04
RNF40-212ENST00000602784 GCNT4Q9P109 453 aa14.81□□□□□ -0.04
RNF40-212ENST00000602784 GTF3C4Q9UKN8 822 aa14.81□□□□□ -0.04
RNF40-212ENST00000602784 NME7Q9Y5B8 376 aa14.81□□□□□ -0.04
RNF40-212ENST00000602784 PCDHB5Q9Y5E4 795 aa14.81□□□□□ -0.04
RNF40-212ENST00000602784 MYBPHLA2RUH7 354 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 GRXCR2A6NFK2 248 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 BECN2A8MW95 431 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 MBTPS2O43462 519 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 ATP2C2O75185 946 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 XYLBO75191 536 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 CILPO75339 1184 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 RFPL2O75678 378 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 TRIM21P19474 475 aaKnown RBP14.8□□□□□ -0.04
RNF40-212ENST00000602784 MTHFRP42898 656 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 NDST1P52848 882 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 YWHAEP62258 255 aaKnown RBP14.8□□□□□ -0.04
RNF40-212ENST00000602784 GCNT1Q02742 428 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 PLD1Q13393 1074 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 CFAP221Q4G0U5 840 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 ATAT1Q5SQI0 421 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 RARS2Q5T160 578 aaKnown RBP14.8□□□□□ -0.04
RNF40-212ENST00000602784 TRIM65Q6PJ69 517 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 C4orf50Q6ZRC1 276 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 B3GALNT2Q8NCR0 500 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 ZNF707Q96C28 371 aaPredicted RBP14.8□□□□□ -0.04
RNF40-212ENST00000602784 FAM81BQ96LP2 452 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 RIPOR3Q96MK2 946 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 NECTIN4Q96NY8 510 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 PGLYRP2Q96PD5 576 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 ASB2Q96Q27 587 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 CRTAC1Q9NQ79 661 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 CISHQ9NSE2 258 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 TMLHEQ9NVH6 421 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 USP15Q9Y4E8 981 aaPredicted RBP14.8□□□□□ -0.04
RNF40-212ENST00000602784 INSL5Q9Y5Q6 135 aa14.8□□□□□ -0.04
RNF40-212ENST00000602784 XIRP2A4UGR9 3374 aa14.79□□□□□ -0.04
RNF40-212ENST00000602784 HCRTO43612 131 aa14.79□□□□□ -0.04
RNF40-212ENST00000602784 HAPLN1P10915 354 aaPredicted RBP14.79□□□□□ -0.04
RNF40-212ENST00000602784 PON1P27169 355 aa14.79□□□□□ -0.04
RNF40-212ENST00000602784 MAGEA11P43364 429 aa14.79□□□□□ -0.04
RNF40-212ENST00000602784 SMAD2Q15796 467 aaKnown RBP14.79□□□□□ -0.04
RNF40-212ENST00000602784 CLUL1Q15846 466 aa14.79□□□□□ -0.04
RNF40-212ENST00000602784 PTCRAQ6ISU1 281 aaPredicted RBP14.79□□□□□ -0.04
RNF40-212ENST00000602784 PHLDB3Q6NSJ2 640 aa14.79□□□□□ -0.04
RNF40-212ENST00000602784 LRSAM1Q6UWE0 723 aa14.79□□□□□ -0.04
RNF40-212ENST00000602784 TMC5Q6UXY8 1006 aa14.79□□□□□ -0.04
RNF40-212ENST00000602784 ENOSF1Q7L5Y1 443 aa14.79□□□□□ -0.04
RNF40-212ENST00000602784 SPATA2LQ8IUW3 424 aaPredicted RBP14.79□□□□□ -0.04
RNF40-212ENST00000602784 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.79□□□□□ -0.04
RNF40-212ENST00000602784 SMG7Q92540 1137 aaKnown RBP14.79□□□□□ -0.04
RNF40-212ENST00000602784 CRACR2AQ9BSW2 395 aa14.79□□□□□ -0.04
RNF40-212ENST00000602784 NT5C1AQ9BXI3 368 aa14.79□□□□□ -0.04
RNF40-212ENST00000602784 CRISPLD1Q9H336 500 aa14.79□□□□□ -0.04
RNF40-212ENST00000602784 CBX8Q9HC52 389 aa14.79□□□□□ -0.04
RNF40-212ENST00000602784 TAB2Q9NYJ8 693 aa14.79□□□□□ -0.04
RNF40-212ENST00000602784 LRG1P02750 347 aa14.78□□□□□ -0.04
RNF40-212ENST00000602784 SLC9A1P19634 815 aa14.78□□□□□ -0.04
RNF40-212ENST00000602784 ALDH1A3P47895 512 aa14.78□□□□□ -0.04
RNF40-212ENST00000602784 COPB1P53618 953 aaKnown RBP14.78□□□□□ -0.04
RNF40-212ENST00000602784 ZNF445P59923 1031 aa14.78□□□□□ -0.04
RNF40-212ENST00000602784 PSMC1P62191 440 aaKnown RBP14.78□□□□□ -0.04
RNF40-212ENST00000602784 LRMPQ12912 555 aa14.78□□□□□ -0.04
RNF40-212ENST00000602784 CBX2Q14781 532 aaPredicted RBP14.78□□□□□ -0.04
RNF40-212ENST00000602784 VSTM1Q6UX27 236 aa14.78□□□□□ -0.04
RNF40-212ENST00000602784 APTXQ7Z2E3 356 aaKnown RBP14.78□□□□□ -0.04
RNF40-212ENST00000602784 ACOT1Q86TX2 421 aa14.78□□□□□ -0.04
RNF40-212ENST00000602784 PPM1KQ8N3J5 372 aa14.78□□□□□ -0.04
RNF40-212ENST00000602784 UBR7Q8N806 425 aa14.78□□□□□ -0.04
RNF40-212ENST00000602784 FAM200AQ8TCP9 573 aa14.78□□□□□ -0.04
RNF40-212ENST00000602784 WHAMMQ8TF30 809 aa14.78□□□□□ -0.04
RNF40-212ENST00000602784 PCED1BQ96HM7 432 aa14.78□□□□□ -0.04
RNF40-212ENST00000602784 CEP295NLQ96MC4 621 aa14.78□□□□□ -0.04
RNF40-212ENST00000602784 ARID3AQ99856 593 aa14.78□□□□□ -0.04
RNF40-212ENST00000602784 APOL5Q9BWW9 433 aa14.78□□□□□ -0.04
RNF40-212ENST00000602784 VPS16Q9H269 839 aa14.78□□□□□ -0.04
RNF40-212ENST00000602784 DPEP3Q9H4B8 488 aa14.78□□□□□ -0.04
RNF40-212ENST00000602784 ABI2Q9NYB9 513 aaPredicted RBP14.78□□□□□ -0.04
RNF40-212ENST00000602784 SLC27A5Q9Y2P5 690 aa14.78□□□□□ -0.04
RNF40-212ENST00000602784 YIPF1Q9Y548 306 aa14.78□□□□□ -0.04
RNF40-212ENST00000602784 ASB3Q9Y575 518 aa14.78□□□□□ -0.04
RNF40-212ENST00000602784 LGALS16A8MUM7 142 aa14.77□□□□□ -0.05
RNF40-212ENST00000602784 PES1O00541 588 aaKnown RBP14.77□□□□□ -0.05
RNF40-212ENST00000602784 BMP1P13497 986 aa14.77□□□□□ -0.05
RNF40-212ENST00000602784 ATP1A3P13637 1013 aa14.77□□□□□ -0.05
RNF40-212ENST00000602784 CD58P19256 250 aa14.77□□□□□ -0.05
RNF40-212ENST00000602784 EPHB3P54753 998 aa14.77□□□□□ -0.05
RNF40-212ENST00000602784 RPL10AP62906 217 aaKnown RBP14.77□□□□□ -0.05
RNF40-212ENST00000602784 TPM4P67936 248 aa14.77□□□□□ -0.05
RNF40-212ENST00000602784 MDH1BQ5I0G3 518 aa14.77□□□□□ -0.05
RNF40-212ENST00000602784 FKBP15Q5T1M5 1219 aa14.77□□□□□ -0.05
RNF40-212ENST00000602784 ARHGEF19Q8IW93 802 aa14.77□□□□□ -0.05
RNF40-212ENST00000602784 ELMOD1Q8N336 334 aa14.77□□□□□ -0.05
RNF40-212ENST00000602784 TTC9BQ8N6N2 239 aa14.77□□□□□ -0.05
RNF40-212ENST00000602784 MYLPFQ96A32 169 aa14.77□□□□□ -0.05
RNF40-212ENST00000602784 ELOVL4Q9GZR5 314 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms