RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.39■■□□□ 1.5
IRF3-227ENST00000600911 A0A087X0T9 212 aa24.39■■□□□ 1.49
IRF3-227ENST00000600911 CLDN5O00501 218 aa24.39■■□□□ 1.49
IRF3-227ENST00000600911 FAM228BP0C875 321 aa24.39■■□□□ 1.49
IRF3-227ENST00000600911 DNAJB2P25686 324 aa24.39■■□□□ 1.49
IRF3-227ENST00000600911 ELAVL2Q12926 359 aaKnown RBP24.39■■□□□ 1.49
IRF3-227ENST00000600911 USP41Q3LFD5 358 aa24.39■■□□□ 1.49
IRF3-227ENST00000600911 MDH1BQ5I0G3 518 aa24.39■■□□□ 1.49
IRF3-227ENST00000600911 INTS6LQ5JSJ4 861 aaKnown RBP24.39■■□□□ 1.49
IRF3-227ENST00000600911 PASD1Q8IV76 773 aa24.39■■□□□ 1.49
IRF3-227ENST00000600911 SLC30A5Q8TAD4 765 aa24.39■■□□□ 1.49
IRF3-227ENST00000600911 RIN2Q8WYP3 895 aaPredicted RBP24.39■■□□□ 1.49
IRF3-227ENST00000600911 ZBP1Q9H171 429 aa24.39■■□□□ 1.49
IRF3-227ENST00000600911 ZNHIT6Q9NWK9 470 aaKnown RBP24.39■■□□□ 1.49
IRF3-227ENST00000600911 TAS2R14Q9NYV8 317 aa24.39■■□□□ 1.49
IRF3-227ENST00000600911 COL4A4P53420 1690 aaPredicted RBP24.39■■□□□ 1.49
IRF3-227ENST00000600911 O00370 1275 aa24.38■■□□□ 1.49
IRF3-227ENST00000600911 PPM1AP35813 382 aa24.38■■□□□ 1.49
IRF3-227ENST00000600911 CDR2Q01850 454 aa24.38■■□□□ 1.49
IRF3-227ENST00000600911 GFPT1Q06210 699 aaPredicted RBP24.38■■□□□ 1.49
IRF3-227ENST00000600911 CAMK1Q14012 370 aa24.38■■□□□ 1.49
IRF3-227ENST00000600911 TSR1Q2NL82 804 aaKnown RBP24.38■■□□□ 1.49
IRF3-227ENST00000600911 DENND1BQ6P3S1 775 aa24.38■■□□□ 1.49
IRF3-227ENST00000600911 CYP26C1Q6V0L0 522 aa24.38■■□□□ 1.49
IRF3-227ENST00000600911 SPATA18Q8TC71 538 aa24.38■■□□□ 1.49
IRF3-227ENST00000600911 ACBD6Q9BR61 282 aa24.38■■□□□ 1.49
IRF3-227ENST00000600911 TMEM30AQ9NV96 361 aa24.38■■□□□ 1.49
IRF3-227ENST00000600911 ADAMTS1Q9UHI8 967 aa24.38■■□□□ 1.49
IRF3-227ENST00000600911 CDH9Q9ULB4 789 aa24.38■■□□□ 1.49
IRF3-227ENST00000600911 PYCARDQ9ULZ3 195 aa24.38■■□□□ 1.49
IRF3-227ENST00000600911 NENFQ9UMX5 172 aa24.38■■□□□ 1.49
IRF3-227ENST00000600911 EPOPA6NHQ4 379 aa24.37■■□□□ 1.49
IRF3-227ENST00000600911 C5orf67F2Z3F1 127 aa24.37■■□□□ 1.49
IRF3-227ENST00000600911 GRM6O15303 877 aa24.37■■□□□ 1.49
IRF3-227ENST00000600911 VDRP11473 427 aa24.37■■□□□ 1.49
IRF3-227ENST00000600911 ERVFC1P60507 584 aa24.37■■□□□ 1.49
IRF3-227ENST00000600911 DSG1Q02413 1049 aa24.37■■□□□ 1.49
IRF3-227ENST00000600911 CTXN3Q4LDR2 81 aa24.37■■□□□ 1.49
IRF3-227ENST00000600911 FAM171BQ6P995 826 aa24.37■■□□□ 1.49
IRF3-227ENST00000600911 TTC39CQ8N584 583 aa24.37■■□□□ 1.49
IRF3-227ENST00000600911 SPPL3Q8TCT6 385 aa24.37■■□□□ 1.49
IRF3-227ENST00000600911 B3GNT5Q9BYG0 378 aa24.37■■□□□ 1.49
IRF3-227ENST00000600911 REXO2Q9Y3B8 237 aaKnown RBP24.37■■□□□ 1.49
IRF3-227ENST00000600911 PLXNA3P51805 1871 aa24.37■■□□□ 1.49
IRF3-227ENST00000600911 MYO7AQ13402 2215 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 A0A0U1RQJ8 604 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 SSU72P8A0A1W2PR75 194 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 MICAL2O94851 1124 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 VNN2O95498 520 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 KIF11P52732 1056 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 CACNA2D1P54289 1103 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 ERVK-21P61565 698 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 SGO2Q562F6 1265 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 TOGARAM2Q6ZUX3 1019 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 TTC30AQ86WT1 665 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 TMTC1Q8IUR5 882 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 FUKQ8N0W3 1084 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 WDTC1Q8N5D0 677 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 SLC2A14Q8TDB8 520 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 ATRIPQ8WXE1 791 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 PIK3R5Q8WYR1 880 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 MYLPFQ96A32 169 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 CYFIP2Q96F07 1278 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 PCED1BQ96HM7 432 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 DESI2Q9BSY9 194 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 ZCWPW1Q9H0M4 648 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 CYTH4Q9UIA0 394 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 TSPAN16Q9UKR8 245 aa24.36■■□□□ 1.49
IRF3-227ENST00000600911 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.36■■□□□ 1.49
IRF3-227ENST00000600911 TULP2O00295 520 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 LILRB3O75022 631 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 ADORA2BP29275 332 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 GLUD2P49448 558 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 BPIFB4P59827 614 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 CYP27A1Q02318 531 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 PSMD5Q16401 504 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 GOLGA7BQ2TAP0 167 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 ZNF280DQ6N043 979 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 ACRBPQ8NEB7 543 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 UBA3Q8TBC4 463 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 TGS1Q96RS0 853 aaKnown RBP24.35■■□□□ 1.49
IRF3-227ENST00000600911 CLSTN3Q9BQT9 956 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 MTRRQ9UBK8 725 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 TFR2Q9UP52 801 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 PCSK1P29120 753 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 IRS1P35568 1242 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 PTPN14Q15678 1187 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 THEM5Q8N1Q8 247 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 POF1BQ8WVV4 589 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 TNIP3Q96KP6 325 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.35■■□□□ 1.49
IRF3-227ENST00000600911 ZNF518BQ9C0D4 1074 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 SEPT11Q9NVA2 429 aaKnown RBP24.35■■□□□ 1.49
IRF3-227ENST00000600911 BZW2Q9Y6E2 419 aaKnown RBP24.35■■□□□ 1.49
IRF3-227ENST00000600911 CDY1Q9Y6F8 540 aa24.35■■□□□ 1.49
IRF3-227ENST00000600911 ARHGEF37A1IGU5 675 aa24.34■■□□□ 1.49
IRF3-227ENST00000600911 BEST1O76090 585 aa24.34■■□□□ 1.49
IRF3-227ENST00000600911 ARPP19P56211 112 aa24.34■■□□□ 1.49
IRF3-227ENST00000600911 SLC39A12Q504Y0 691 aa24.34■■□□□ 1.49
IRF3-227ENST00000600911 PKDCCQ504Y2 493 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms