RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 CCDC192P0DO97 292 aa17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 ACOT2P49753 483 aa17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 NLRP12P59046 1061 aa17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 NUCB2P80303 420 aa17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 RESTQ13127 1097 aa17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 VEPH1Q14D04 833 aa17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 PLK5Q496M5 336 aa17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 RILPL1Q5EBL4 403 aa17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 WSCD1Q658N2 575 aa17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 CD302Q8IX05 232 aa17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 KCTD17Q8N5Z5 321 aa17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 STKLD1Q8NE28 680 aa17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 EZH1Q92800 747 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 HHIPQ96QV1 700 aa17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 FIZ1Q96SL8 496 aa17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 REEP2Q9BRK0 252 aa17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 MSTO1Q9BUK6 570 aa17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 DUSP15Q9H1R2 295 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 TMLHEQ9NVH6 421 aa17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 SCN1AP35498 2009 aa17.77■□□□□ 0.43
SHKBP1-215ENST00000597649 VWA3AA6NCI4 1184 aa17.76■□□□□ 0.43
SHKBP1-215ENST00000597649 TISP43B9A030 160 aa17.76■□□□□ 0.43
SHKBP1-215ENST00000597649 DCLK1O15075 740 aa17.76■□□□□ 0.43
SHKBP1-215ENST00000597649 F13A1P00488 732 aa17.76■□□□□ 0.43
SHKBP1-215ENST00000597649 PAX3P23760 479 aa17.76■□□□□ 0.43
SHKBP1-215ENST00000597649 MPLP40238 635 aa17.76■□□□□ 0.43
SHKBP1-215ENST00000597649 GPR15P49685 360 aa17.76■□□□□ 0.43
SHKBP1-215ENST00000597649 TMEM132DQ14C87 1099 aa17.76■□□□□ 0.43
SHKBP1-215ENST00000597649 PTPAQ15257 358 aa17.76■□□□□ 0.43
SHKBP1-215ENST00000597649 MYCT1Q8N699 235 aa17.76■□□□□ 0.43
SHKBP1-215ENST00000597649 GCNAQ96QF7 691 aa17.76■□□□□ 0.43
SHKBP1-215ENST00000597649 PYM1Q9BRP8 204 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-215ENST00000597649 IKZF4Q9H2S9 585 aa17.76■□□□□ 0.43
SHKBP1-215ENST00000597649 TDP1Q9NUW8 608 aa17.76■□□□□ 0.43
SHKBP1-215ENST00000597649 ABI2Q9NYB9 513 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-215ENST00000597649 PCDHGA5Q9Y5G8 931 aa17.76■□□□□ 0.43
SHKBP1-215ENST00000597649 MYH11P35749 1972 aa17.75■□□□□ 0.43
SHKBP1-215ENST00000597649 BAHCC1Q9P281 2608 aa17.75■□□□□ 0.43
SHKBP1-215ENST00000597649 ATG13O75143 517 aa17.75■□□□□ 0.43
SHKBP1-215ENST00000597649 AKAP3O75969 853 aa17.75■□□□□ 0.43
SHKBP1-215ENST00000597649 AVPR1AP37288 418 aa17.75■□□□□ 0.43
SHKBP1-215ENST00000597649 ZNF131P52739 623 aa17.75■□□□□ 0.43
SHKBP1-215ENST00000597649 PKP1Q13835 747 aa17.75■□□□□ 0.43
SHKBP1-215ENST00000597649 TAF12Q16514 161 aa17.75■□□□□ 0.43
SHKBP1-215ENST00000597649 SDHAF4Q5VUM1 108 aa17.75■□□□□ 0.43
SHKBP1-215ENST00000597649 GPBP1Q86WP2 473 aa17.75■□□□□ 0.43
SHKBP1-215ENST00000597649 CAMKK1Q8N5S9 505 aa17.75■□□□□ 0.43
SHKBP1-215ENST00000597649 SPPL2BQ8TCT7 592 aa17.75■□□□□ 0.43
SHKBP1-215ENST00000597649 VPS45Q9NRW7 570 aa17.75■□□□□ 0.43
SHKBP1-215ENST00000597649 DSEQ9UL01 958 aa17.75■□□□□ 0.43
SHKBP1-215ENST00000597649 ODF2LQ9ULJ1 636 aa17.75■□□□□ 0.43
SHKBP1-215ENST00000597649 DERAQ9Y315 318 aa17.75■□□□□ 0.43
SHKBP1-215ENST00000597649 DSPP15924 2871 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-215ENST00000597649 ANK1P16157 1881 aa17.75■□□□□ 0.43
SHKBP1-215ENST00000597649 DMXL2Q8TDJ6 3036 aa17.74■□□□□ 0.43
SHKBP1-215ENST00000597649 K7ENM7 598 aa17.74■□□□□ 0.43
SHKBP1-215ENST00000597649 GJA4P35212 333 aa17.74■□□□□ 0.43
SHKBP1-215ENST00000597649 DHX8Q14562 1220 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-215ENST00000597649 SCARA3Q6AZY7 606 aa17.74■□□□□ 0.43
SHKBP1-215ENST00000597649 MON1AQ86VX9 555 aa17.74■□□□□ 0.43
SHKBP1-215ENST00000597649 METTL23Q86XA0 190 aa17.74■□□□□ 0.43
SHKBP1-215ENST00000597649 THEM5Q8N1Q8 247 aa17.74■□□□□ 0.43
SHKBP1-215ENST00000597649 C2orf15Q8WU43 125 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-215ENST00000597649 CCSER1Q9C0I3 900 aa17.74■□□□□ 0.43
SHKBP1-215ENST00000597649 BLOC1S4Q9NUP1 217 aa17.74■□□□□ 0.43
SHKBP1-215ENST00000597649 DPP3Q9NY33 737 aa17.74■□□□□ 0.43
SHKBP1-215ENST00000597649 ABCA7Q8IZY2 2146 aa17.74■□□□□ 0.43
SHKBP1-215ENST00000597649 EML5Q05BV3 1969 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 GIPC1O14908 333 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 TRAK2O60296 914 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 TADA3O75528 432 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 DRD1P21728 446 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 TAF6P49848 677 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 GTF2BQ00403 316 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 SMARCB1Q12824 385 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 BFSP1Q12934 665 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 ZC2HC1CQ53FD0 456 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 RNF43Q68DV7 783 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 PSAPL1Q6NUJ1 521 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 CRELD2Q6UXH1 353 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 EFCAB13Q8IY85 973 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 RPLP0P6Q8NHW5 317 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 CDK5RAP3Q96JB5 506 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 ZNF396Q96N95 335 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 SLC22A12Q96S37 553 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 CYP2S1Q96SQ9 504 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 P2RY13Q9BPV8 354 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 PI4K2AQ9BTU6 479 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 ASB7Q9H672 318 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 PARVGQ9HBI0 331 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 ZMYM5Q9UJ78 669 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 CIZ1Q9ULV3 898 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 C2CD2Q9Y426 696 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 ATP6V1DQ9Y5K8 247 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 LAMA5O15230 3695 aa17.73■□□□□ 0.43
SHKBP1-215ENST00000597649 TSC2P49815 1807 aa17.72■□□□□ 0.43
SHKBP1-215ENST00000597649 ANTXRLA6NF34 631 aa17.72■□□□□ 0.43
SHKBP1-215ENST00000597649 FAM13AO94988 1023 aa17.72■□□□□ 0.43
SHKBP1-215ENST00000597649 DDX6P26196 483 aaKnown RBP eCLIP17.72■□□□□ 0.43
SHKBP1-215ENST00000597649 MCM6Q14566 821 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms