RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 CLUL1Q15846 466 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 NFE2Q16621 373 aaPredicted RBP20.61■□□□□ 0.89
PNKP-207ENST00000596014 UNC93AQ86WB7 457 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 SLC7A14Q8TBB6 771 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 S1PR5Q9H228 398 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 DPEP3Q9H4B8 488 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 SFXN1Q9H9B4 322 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 CISHQ9NSE2 258 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 CD207Q9UJ71 328 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 PTPN1P18031 435 aaKnown RBP20.6■□□□□ 0.89
PNKP-207ENST00000596014 TBXAS1P24557 533 aaPredicted RBP20.6■□□□□ 0.89
PNKP-207ENST00000596014 PON1P27169 355 aa20.6■□□□□ 0.89
PNKP-207ENST00000596014 CCDC142Q17RM4 750 aa20.6■□□□□ 0.89
PNKP-207ENST00000596014 PHLDB3Q6NSJ2 640 aa20.6■□□□□ 0.89
PNKP-207ENST00000596014 TRIM65Q6PJ69 517 aa20.6■□□□□ 0.89
PNKP-207ENST00000596014 CCDC149Q6ZUS6 474 aa20.6■□□□□ 0.89
PNKP-207ENST00000596014 RTL10Q7L3V2 364 aa20.6■□□□□ 0.89
PNKP-207ENST00000596014 ARHGEF19Q8IW93 802 aa20.6■□□□□ 0.89
PNKP-207ENST00000596014 PPM1KQ8N3J5 372 aa20.6■□□□□ 0.89
PNKP-207ENST00000596014 C2orf15Q8WU43 125 aaKnown RBP20.6■□□□□ 0.89
PNKP-207ENST00000596014 APOL5Q9BWW9 433 aa20.6■□□□□ 0.89
PNKP-207ENST00000596014 CRISPLD1Q9H336 500 aa20.6■□□□□ 0.89
PNKP-207ENST00000596014 FAM124BQ9H5Z6 455 aaPredicted RBP20.6■□□□□ 0.89
PNKP-207ENST00000596014 THEGQ9P2T0 379 aa20.6■□□□□ 0.89
PNKP-207ENST00000596014 SLC27A5Q9Y2P5 690 aa20.6■□□□□ 0.89
PNKP-207ENST00000596014 CCDC195A0A1B0GUA6 201 aa20.59■□□□□ 0.89
PNKP-207ENST00000596014 CILPO75339 1184 aa20.59■□□□□ 0.89
PNKP-207ENST00000596014 KCNMA1Q12791 1236 aa20.59■□□□□ 0.89
PNKP-207ENST00000596014 MAPRE1Q15691 268 aaKnown RBP20.59■□□□□ 0.89
PNKP-207ENST00000596014 LEXMQ3ZCV2 418 aa20.59■□□□□ 0.89
PNKP-207ENST00000596014 PPM1LQ5SGD2 360 aa20.59■□□□□ 0.89
PNKP-207ENST00000596014 RARS2Q5T160 578 aaKnown RBP20.59■□□□□ 0.89
PNKP-207ENST00000596014 TMC5Q6UXY8 1006 aa20.59■□□□□ 0.89
PNKP-207ENST00000596014 RRAGAQ7L523 313 aa20.59■□□□□ 0.89
PNKP-207ENST00000596014 TTC39CQ8N584 583 aa20.59■□□□□ 0.89
PNKP-207ENST00000596014 B3GALNT2Q8NCR0 500 aa20.59■□□□□ 0.89
PNKP-207ENST00000596014 SMRP1Q8NCR6 262 aa20.59■□□□□ 0.89
PNKP-207ENST00000596014 MYCBPAPQ8TBZ2 947 aa20.59■□□□□ 0.89
PNKP-207ENST00000596014 WHAMMQ8TF30 809 aa20.59■□□□□ 0.89
PNKP-207ENST00000596014 TNIP3Q96KP6 325 aa20.59■□□□□ 0.89
PNKP-207ENST00000596014 LPIN3Q9BQK8 851 aa20.59■□□□□ 0.89
PNKP-207ENST00000596014 ZDHHC7Q9NXF8 308 aa20.59■□□□□ 0.89
PNKP-207ENST00000596014 HSFX1Q9UBD0 423 aa20.59■□□□□ 0.89
PNKP-207ENST00000596014 HMGXB4Q9UGU5 601 aa20.59■□□□□ 0.89
PNKP-207ENST00000596014 PCDHB5Q9Y5E4 795 aa20.59■□□□□ 0.89
PNKP-207ENST00000596014 DOCK6Q96HP0 2047 aa20.58■□□□□ 0.89
PNKP-207ENST00000596014 GCNT1Q02742 428 aa20.58■□□□□ 0.89
PNKP-207ENST00000596014 ACOT1Q86TX2 421 aa20.58■□□□□ 0.89
PNKP-207ENST00000596014 CRYBG2Q8N1P7 616 aa20.58■□□□□ 0.89
PNKP-207ENST00000596014 CMASQ8NFW8 434 aaPredicted RBP20.58■□□□□ 0.89
PNKP-207ENST00000596014 FEZF2Q8TBJ5 459 aa20.58■□□□□ 0.89
PNKP-207ENST00000596014 SPPL2BQ8TCT7 592 aa20.58■□□□□ 0.89
PNKP-207ENST00000596014 KAT5Q92993 513 aa20.58■□□□□ 0.89
PNKP-207ENST00000596014 TWNKQ96RR1 684 aa20.58■□□□□ 0.89
PNKP-207ENST00000596014 NT5C1AQ9BXI3 368 aa20.58■□□□□ 0.89
PNKP-207ENST00000596014 ADAM7Q9H2U9 754 aa20.58■□□□□ 0.89
PNKP-207ENST00000596014 ABI2Q9NYB9 513 aaPredicted RBP20.58■□□□□ 0.89
PNKP-207ENST00000596014 C2orf16Q68DN1 1984 aa20.58■□□□□ 0.89
PNKP-207ENST00000596014 GOLGA6L19H0YKK7 550 aa20.58■□□□□ 0.88
PNKP-207ENST00000596014 PAPLNO95428 1278 aa20.58■□□□□ 0.88
PNKP-207ENST00000596014 HOXA9P31269 272 aa20.58■□□□□ 0.88
PNKP-207ENST00000596014 TPM4P67936 248 aa20.58■□□□□ 0.88
PNKP-207ENST00000596014 APBA1Q02410 837 aa20.58■□□□□ 0.88
PNKP-207ENST00000596014 ITIH3Q06033 890 aa20.58■□□□□ 0.88
PNKP-207ENST00000596014 ORC1Q13415 861 aa20.58■□□□□ 0.88
PNKP-207ENST00000596014 MDH1BQ5I0G3 518 aa20.58■□□□□ 0.88
PNKP-207ENST00000596014 TTC9BQ8N6N2 239 aa20.58■□□□□ 0.88
PNKP-207ENST00000596014 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.58■□□□□ 0.88
PNKP-207ENST00000596014 PCED1BQ96HM7 432 aa20.58■□□□□ 0.88
PNKP-207ENST00000596014 PRKD2Q9BZL6 878 aa20.58■□□□□ 0.88
PNKP-207ENST00000596014 UBE2TQ9NPD8 197 aaPredicted RBP20.58■□□□□ 0.88
PNKP-207ENST00000596014 APEX2Q9UBZ4 518 aa20.58■□□□□ 0.88
PNKP-207ENST00000596014 INSL5Q9Y5Q6 135 aa20.58■□□□□ 0.88
PNKP-207ENST00000596014 PTPRDP23468 1912 aa20.57■□□□□ 0.88
PNKP-207ENST00000596014 LGALS16A8MUM7 142 aa20.57■□□□□ 0.88
PNKP-207ENST00000596014 HNRNPA1P09651 372 aaKnown RBP eCLIP20.57■□□□□ 0.88
PNKP-207ENST00000596014 YWHAEP62258 255 aaKnown RBP20.57■□□□□ 0.88
PNKP-207ENST00000596014 FKBP15Q5T1M5 1219 aa20.57■□□□□ 0.88
PNKP-207ENST00000596014 CES5AQ6NT32 575 aa20.57■□□□□ 0.88
PNKP-207ENST00000596014 C4orf50Q6ZRC1 276 aa20.57■□□□□ 0.88
PNKP-207ENST00000596014 GPR149Q86SP6 731 aa20.57■□□□□ 0.88
PNKP-207ENST00000596014 SPATA2LQ8IUW3 424 aaPredicted RBP20.57■□□□□ 0.88
PNKP-207ENST00000596014 UBR7Q8N806 425 aa20.57■□□□□ 0.88
PNKP-207ENST00000596014 MYLPFQ96A32 169 aa20.57■□□□□ 0.88
PNKP-207ENST00000596014 ZNF707Q96C28 371 aaPredicted RBP20.57■□□□□ 0.88
PNKP-207ENST00000596014 KREMEN1Q96MU8 473 aa20.57■□□□□ 0.88
PNKP-207ENST00000596014 ELOVL4Q9GZR5 314 aa20.57■□□□□ 0.88
PNKP-207ENST00000596014 SIX2Q9NPC8 291 aa20.57■□□□□ 0.88
PNKP-207ENST00000596014 TUFMP49411 452 aaKnown RBP20.56■□□□□ 0.88
PNKP-207ENST00000596014 CYP27A1Q02318 531 aa20.56■□□□□ 0.88
PNKP-207ENST00000596014 CFAP221Q4G0U5 840 aa20.56■□□□□ 0.88
PNKP-207ENST00000596014 ZNF394Q53GI3 561 aa20.56■□□□□ 0.88
PNKP-207ENST00000596014 DPY19L2P1Q6NXN4 242 aa20.56■□□□□ 0.88
PNKP-207ENST00000596014 GJB7Q6PEY0 223 aa20.56■□□□□ 0.88
PNKP-207ENST00000596014 FUBP3Q96I24 572 aaKnown RBP eCLIP20.56■□□□□ 0.88
PNKP-207ENST00000596014 PDLIM2Q96JY6 352 aa20.56■□□□□ 0.88
PNKP-207ENST00000596014 ABCB6Q9NP58 842 aa20.56■□□□□ 0.88
PNKP-207ENST00000596014 GRXCR2A6NFK2 248 aa20.55■□□□□ 0.88
PNKP-207ENST00000596014 CCL16O15467 120 aa20.55■□□□□ 0.88
PNKP-207ENST00000596014 MBTPS2O43462 519 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms