RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 ZNF720Q7Z2F6 126 aa16.63■□□□□ 0.25
FOXA3-202ENST00000594297 HAUS6Q7Z4H7 955 aa16.63■□□□□ 0.25
FOXA3-202ENST00000594297 SYCP3Q8IZU3 236 aa16.63■□□□□ 0.25
FOXA3-202ENST00000594297 LEMD2Q8NC56 503 aa16.63■□□□□ 0.25
FOXA3-202ENST00000594297 TTC8Q8TAM2 541 aa16.63■□□□□ 0.25
FOXA3-202ENST00000594297 ZMAT2Q96NC0 199 aaKnown RBP16.63■□□□□ 0.25
FOXA3-202ENST00000594297 ACCSQ96QU6 501 aa16.63■□□□□ 0.25
FOXA3-202ENST00000594297 SMOC1Q9H4F8 434 aa16.63■□□□□ 0.25
FOXA3-202ENST00000594297 C8orf33Q9H7E9 229 aaPredicted RBP16.63■□□□□ 0.25
FOXA3-202ENST00000594297 AFF4Q9UHB7 1163 aaKnown RBP16.63■□□□□ 0.25
FOXA3-202ENST00000594297 YIPF1Q9Y548 306 aa16.63■□□□□ 0.25
FOXA3-202ENST00000594297 CITO14578 2027 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 MYBPHLA2RUH7 354 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 BECN2A8MW95 431 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 SLC16A4O15374 487 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 PROS1P07225 676 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 ZNF806P0C7X5 589 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 CPB1P15086 417 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 GRM5P41594 1212 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 ZNF165P49910 485 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 NCKAP1LP55160 1127 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 OSTNP61366 133 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 PON2Q15165 354 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 DPCR1Q3MIW9 517 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 XKR4Q5GH76 650 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 DGKKQ5KSL6 1271 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 STPG1Q5TH74 334 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 HS2ST1Q7LGA3 356 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 TMC8Q8IU68 726 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 GOLGA5Q8TBA6 731 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 ZFYVE19Q96K21 471 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 CDT1Q9H211 546 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 SLC38A7Q9NVC3 462 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 NUB1Q9Y5A7 615 aa16.62■□□□□ 0.25
FOXA3-202ENST00000594297 CNOT1A5YKK6 2376 aaKnown RBP16.62■□□□□ 0.25
FOXA3-202ENST00000594297 FAM208BQ5VWN6 2430 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 SPAG17Q6Q759 2223 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 CEP295Q9C0D2 2601 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 A0A1W2PRU2 124 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 GOLGA6L19H0YKK7 550 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 KCNK5O95279 499 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 FGFR1OPO95684 399 aaKnown RBP16.61■□□□□ 0.25
FOXA3-202ENST00000594297 HOXB3P14651 431 aaPredicted RBP16.61■□□□□ 0.25
FOXA3-202ENST00000594297 NMT1P30419 496 aaKnown RBP16.61■□□□□ 0.25
FOXA3-202ENST00000594297 HOXA6P31267 233 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 PRCPP42785 496 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 PXNP49023 591 aaPredicted RBP16.61■□□□□ 0.25
FOXA3-202ENST00000594297 YARSP54577 528 aaKnown RBP16.61■□□□□ 0.25
FOXA3-202ENST00000594297 SNRPFP62306 86 aaKnown RBP16.61■□□□□ 0.25
FOXA3-202ENST00000594297 GTF2BQ00403 316 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 PAK1Q13153 545 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 CCINQ13939 588 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 ZNF568Q3ZCX4 644 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 KLHL10Q6JEL2 608 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 PKN3Q6P5Z2 889 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 ALKAL1Q6UXT8 129 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 RNF19BQ6ZMZ0 732 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 KBTBD6Q86V97 674 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 RALGPS2Q86X27 583 aaPredicted RBP16.61■□□□□ 0.25
FOXA3-202ENST00000594297 GPIHBP1Q8IV16 184 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 ZNF507Q8TCN5 953 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 FAM200AQ8TCP9 573 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 GAB3Q8WWW8 586 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 HPS3Q969F9 1004 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 E2F7Q96AV8 911 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 C18orf25Q96B23 403 aaPredicted RBP16.61■□□□□ 0.25
FOXA3-202ENST00000594297 SUSD3Q96L08 255 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 BPIFA3Q9BQP9 254 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 CCDC94Q9BW85 323 aaPredicted RBP16.61■□□□□ 0.25
FOXA3-202ENST00000594297 LRRC3Q9BY71 257 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 DNAJC25Q9H1X3 360 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 TMEM134Q9H6X4 195 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 TOPORSQ9NS56 1045 aaPredicted RBP16.61■□□□□ 0.25
FOXA3-202ENST00000594297 GTSE1Q9NYZ3 720 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 CGNQ9P2M7 1197 aaKnown RBP16.61■□□□□ 0.25
FOXA3-202ENST00000594297 MAPK8IP1Q9UQF2 711 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 TNFSF13BQ9Y275 285 aa16.61■□□□□ 0.25
FOXA3-202ENST00000594297 C1QTNF9BB2RNN3 333 aa16.6■□□□□ 0.25
FOXA3-202ENST00000594297 CALUO43852 315 aaPredicted RBP16.6■□□□□ 0.25
FOXA3-202ENST00000594297 EXTL3O43909 919 aa16.6■□□□□ 0.25
FOXA3-202ENST00000594297 RPP40O75818 363 aaKnown RBP16.6■□□□□ 0.25
FOXA3-202ENST00000594297 VNN2O95498 520 aa16.6■□□□□ 0.25
FOXA3-202ENST00000594297 C1QTNF9P0C862 333 aa16.6■□□□□ 0.25
FOXA3-202ENST00000594297 RAP1GAPP47736 663 aa16.6■□□□□ 0.25
FOXA3-202ENST00000594297 KNOP1Q1ED39 458 aaKnown RBP16.6■□□□□ 0.25
FOXA3-202ENST00000594297 APBB1IPQ7Z5R6 666 aaPredicted RBP16.6■□□□□ 0.25
FOXA3-202ENST00000594297 SMYD4Q8IYR2 804 aaPredicted RBP16.6■□□□□ 0.25
FOXA3-202ENST00000594297 KIAA0895Q8NCT3 520 aa16.6■□□□□ 0.25
FOXA3-202ENST00000594297 TMEM161BQ8NDZ6 487 aa16.6■□□□□ 0.25
FOXA3-202ENST00000594297 BICD1Q96G01 975 aa16.6■□□□□ 0.25
FOXA3-202ENST00000594297 LOXL4Q96JB6 756 aa16.6■□□□□ 0.25
FOXA3-202ENST00000594297 LRRC3BQ96PB8 259 aa16.6■□□□□ 0.25
FOXA3-202ENST00000594297 FUCA2Q9BTY2 467 aa16.6■□□□□ 0.25
FOXA3-202ENST00000594297 MKNK1Q9BUB5 465 aa16.6■□□□□ 0.25
FOXA3-202ENST00000594297 GPR88Q9GZN0 384 aa16.6■□□□□ 0.25
FOXA3-202ENST00000594297 RWDD2AQ9UIY3 292 aa16.6■□□□□ 0.25
FOXA3-202ENST00000594297 TSC2P49815 1807 aa16.6■□□□□ 0.25
FOXA3-202ENST00000594297 LAMA1P25391 3075 aa16.6■□□□□ 0.25
FOXA3-202ENST00000594297 ASPMQ8IZT6 3477 aa16.6■□□□□ 0.25
FOXA3-202ENST00000594297 ZZEF1O43149 2961 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms