RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 PIBF1Q8WXW3 757 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 RFFLQ8WZ73 363 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 DNASE2BQ8WZ79 361 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 APPBP2Q92624 585 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 USP13Q92995 863 aaPredicted RBP3.41□□□□□ -1.86
VRK3-204ENST00000593912 MTMR8Q96EF0 704 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 CPB2Q96IY4 423 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 CDHR1Q96JP9 859 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 NLRP4Q96MN2 994 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 PIGSQ96S52 555 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 SH2D3AQ9BRG2 576 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 SDF4Q9BRK5 362 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 GPR174Q9BXC1 333 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 KRTAP17-1Q9BYP8 105 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 CRISPLD1Q9H336 500 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 MINDY3Q9H8M7 445 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 LY9Q9HBG7 655 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 KCNH7Q9NS40 1196 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.41□□□□□ -1.86
VRK3-204ENST00000593912 ATXN7L1Q9ULK2 861 aaPredicted RBP3.41□□□□□ -1.86
VRK3-204ENST00000593912 TPCN1Q9ULQ1 816 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 ANKRD6Q9Y2G4 727 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 STARD13Q9Y3M8 1113 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 YIPF1Q9Y548 306 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 PCDHGA4Q9Y5G9 962 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 ARID1BQ8NFD5 2236 aaPredicted RBP3.41□□□□□ -1.86
VRK3-204ENST00000593912 TGP01266 2768 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 NUMA1Q14980 2115 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 VPS13CQ709C8 3753 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 PLXNA2O75051 1894 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 TRIP11Q15643 1979 aa3.4□□□□□ -1.86
VRK3-204ENST00000593912 TMEM150BA6NC51 233 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 BTBD18B2RXH4 712 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 MEIS1O00470 390 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 MEIS2O14770 477 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 VPS4BO75351 444 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 CSO75390 466 aaKnown RBP3.4□□□□□ -1.87
VRK3-204ENST00000593912 SOAT2O75908 522 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 FAM155BO75949 473 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 GJB6O95452 261 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 VNN2O95498 520 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 LDLRP01130 860 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 WNT1P04628 370 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 GNAT2P19087 354 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 NR1D1P20393 614 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 FLNAP21333 2647 aaKnown RBP3.4□□□□□ -1.87
VRK3-204ENST00000593912 KIF5BP33176 963 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 TNFSF9P41273 254 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 KIR2DL1P43626 348 aaPredicted RBP3.4□□□□□ -1.87
VRK3-204ENST00000593912 SLC6A11P48066 632 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 POLE2P56282 527 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 MRPS21P82921 87 aaKnown RBP3.4□□□□□ -1.87
VRK3-204ENST00000593912 ANK2Q01484 3957 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 KDSRQ06136 332 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 GRIK3Q13003 919 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 MRPL49Q13405 166 aaKnown RBP3.4□□□□□ -1.87
VRK3-204ENST00000593912 SART3Q15020 963 aaKnown RBP3.4□□□□□ -1.87
VRK3-204ENST00000593912 UBE2SQ16763 222 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 GAB4Q2WGN9 574 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 INAVAQ3KP66 663 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 EOGTQ5NDL2 527 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 SLC8B1Q6J4K2 584 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 CD300LGQ6UXG3 332 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 RNF19BQ6ZMZ0 732 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 SV2AQ7L0J3 742 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 TIPARPQ7Z3E1 657 aaKnown RBP3.4□□□□□ -1.87
VRK3-204ENST00000593912 CDR2LQ86X02 465 aaPredicted RBP3.4□□□□□ -1.87
VRK3-204ENST00000593912 XYLT1Q86Y38 959 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 RHPN2Q8IUC4 686 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 TTC9BQ8N6N2 239 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 LEMD2Q8NC56 503 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 C1orf216Q8TAB5 229 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 CCER1Q8TC90 406 aaPredicted RBP3.4□□□□□ -1.87
VRK3-204ENST00000593912 CPT1CQ8TCG5 803 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 SNX19Q92543 992 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 FOXJ1Q92949 421 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 IGSF8Q969P0 613 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 TOE1Q96GM8 510 aaKnown RBP3.4□□□□□ -1.87
VRK3-204ENST00000593912 PRR11Q96HE9 360 aaPredicted RBP3.4□□□□□ -1.87
VRK3-204ENST00000593912 PRIMPOLQ96LW4 560 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 SLC46A1Q96NT5 459 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 SLC46A2Q9BY10 475 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 NACAP1Q9BZK3 213 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 API5Q9BZZ5 524 aaKnown RBP3.4□□□□□ -1.87
VRK3-204ENST00000593912 UBN1Q9NPG3 1134 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 ADAMTS1Q9UHI8 967 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 ERRFI1Q9UJM3 462 aaPredicted RBP3.4□□□□□ -1.87
VRK3-204ENST00000593912 KCND3Q9UK17 655 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 VPS4AQ9UN37 437 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 BACE2Q9Y5Z0 518 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 NFASCO94856 1347 aa3.4□□□□□ -1.87
VRK3-204ENST00000593912 NSD1Q96L73 2696 aaPredicted RBP3.39□□□□□ -1.87
VRK3-204ENST00000593912 NBEAL2Q6ZNJ1 2754 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 A0A1B0GTQ1 180 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 A0A1W2PQF6 199 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 TMEM200CA6NKL6 621 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 CDRT15L2A8MXV6 281 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 KCNJ18B7U540 433 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 KLRF2D3W0D1 207 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 PTGESO14684 152 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms