RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 KPNA7A9QM74 516 aa15.88■□□□□ 0.13
PNKP-202ENST00000593706 SLC30A4O14863 429 aa15.88■□□□□ 0.13
PNKP-202ENST00000593706 FOXD2O60548 495 aaPredicted RBP15.88■□□□□ 0.13
PNKP-202ENST00000593706 PPM1JQ5JR12 505 aa15.88■□□□□ 0.13
PNKP-202ENST00000593706 HSCBQ8IWL3 235 aa15.88■□□□□ 0.13
PNKP-202ENST00000593706 EFCAB13Q8IY85 973 aa15.88■□□□□ 0.13
PNKP-202ENST00000593706 CMTM8Q8IZV2 173 aa15.88■□□□□ 0.13
PNKP-202ENST00000593706 MAB21L3Q8N8X9 362 aa15.88■□□□□ 0.13
PNKP-202ENST00000593706 CLIC6Q96NY7 704 aa15.88■□□□□ 0.13
PNKP-202ENST00000593706 FIZ1Q96SL8 496 aa15.88■□□□□ 0.13
PNKP-202ENST00000593706 SLC46A2Q9BY10 475 aa15.88■□□□□ 0.13
PNKP-202ENST00000593706 GKN1Q9NS71 199 aa15.88■□□□□ 0.13
PNKP-202ENST00000593706 PCDHB5Q9Y5E4 795 aa15.88■□□□□ 0.13
PNKP-202ENST00000593706 CFAP47Q6ZTR5 3102 aa15.87■□□□□ 0.13
PNKP-202ENST00000593706 IL18RAPO95256 599 aa15.87■□□□□ 0.13
PNKP-202ENST00000593706 HAPLN1P10915 354 aaPredicted RBP15.87■□□□□ 0.13
PNKP-202ENST00000593706 DDX6P26196 483 aaKnown RBP eCLIP15.87■□□□□ 0.13
PNKP-202ENST00000593706 NLRP12P59046 1061 aa15.87■□□□□ 0.13
PNKP-202ENST00000593706 GRSF1Q12849 480 aaKnown RBP eCLIP15.87■□□□□ 0.13
PNKP-202ENST00000593706 CC2D1AQ6P1N0 951 aaPredicted RBP15.87■□□□□ 0.13
PNKP-202ENST00000593706 DYMQ7RTS9 669 aa15.87■□□□□ 0.13
PNKP-202ENST00000593706 WDR5BQ86VZ2 330 aa15.87■□□□□ 0.13
PNKP-202ENST00000593706 SFR1Q86XK3 245 aa15.87■□□□□ 0.13
PNKP-202ENST00000593706 STKLD1Q8NE28 680 aa15.87■□□□□ 0.13
PNKP-202ENST00000593706 TTC16Q8NEE8 873 aa15.87■□□□□ 0.13
PNKP-202ENST00000593706 MRPS31Q92665 395 aaKnown RBP15.87■□□□□ 0.13
PNKP-202ENST00000593706 HVCN1Q96D96 273 aa15.87■□□□□ 0.13
PNKP-202ENST00000593706 EBF3Q9H4W6 596 aa15.87■□□□□ 0.13
PNKP-202ENST00000593706 KIF9Q9HAQ2 790 aa15.87■□□□□ 0.13
PNKP-202ENST00000593706 MAGED2Q9UNF1 606 aaPredicted RBP15.87■□□□□ 0.13
PNKP-202ENST00000593706 MYOFQ9NZM1 2061 aa15.87■□□□□ 0.13
PNKP-202ENST00000593706 A0A087X0B3 334 aa15.86■□□□□ 0.13
PNKP-202ENST00000593706 EXTL3O43909 919 aa15.86■□□□□ 0.13
PNKP-202ENST00000593706 PRPF40AO75400 957 aaKnown RBP15.86■□□□□ 0.13
PNKP-202ENST00000593706 ADRB1P08588 477 aa15.86■□□□□ 0.13
PNKP-202ENST00000593706 CCDC192P0DO97 292 aa15.86■□□□□ 0.13
PNKP-202ENST00000593706 PNPLA4P41247 253 aa15.86■□□□□ 0.13
PNKP-202ENST00000593706 TFAMQ00059 246 aaKnown RBP15.86■□□□□ 0.13
PNKP-202ENST00000593706 CEBPZQ03701 1054 aaKnown RBP15.86■□□□□ 0.13
PNKP-202ENST00000593706 RUNX3Q13761 415 aa15.86■□□□□ 0.13
PNKP-202ENST00000593706 POSTNQ15063 836 aa15.86■□□□□ 0.13
PNKP-202ENST00000593706 NFE2Q16621 373 aaPredicted RBP15.86■□□□□ 0.13
PNKP-202ENST00000593706 AASDHQ4L235 1098 aaPredicted RBP15.86■□□□□ 0.13
PNKP-202ENST00000593706 TRIM68Q6AZZ1 485 aa15.86■□□□□ 0.13
PNKP-202ENST00000593706 LRRTM3Q86VH5 581 aa15.86■□□□□ 0.13
PNKP-202ENST00000593706 NT5DC4Q86YG4 428 aa15.86■□□□□ 0.13
PNKP-202ENST00000593706 C12orf50Q8NA57 414 aaPredicted RBP15.86■□□□□ 0.13
PNKP-202ENST00000593706 LINC00301Q8NCQ3 95 aa15.86■□□□□ 0.13
PNKP-202ENST00000593706 PI4K2AQ9BTU6 479 aa15.86■□□□□ 0.13
PNKP-202ENST00000593706 IKZF4Q9H2S9 585 aa15.86■□□□□ 0.13
PNKP-202ENST00000593706 ST6GALNAC4Q9H4F1 302 aa15.86■□□□□ 0.13
PNKP-202ENST00000593706 MRPL44Q9H9J2 332 aaKnown RBP15.86■□□□□ 0.13
PNKP-202ENST00000593706 TDP1Q9NUW8 608 aa15.86■□□□□ 0.13
PNKP-202ENST00000593706 STK17AQ9UEE5 414 aa15.86■□□□□ 0.13
PNKP-202ENST00000593706 SLC8A2Q9UPR5 921 aa15.86■□□□□ 0.13
PNKP-202ENST00000593706 CCL26Q9Y258 94 aa15.86■□□□□ 0.13
PNKP-202ENST00000593706 STYXL1Q9Y6J8 313 aa15.86■□□□□ 0.13
PNKP-202ENST00000593706 CEP192Q8TEP8 1941 aa15.86■□□□□ 0.13
PNKP-202ENST00000593706 FRYQ5TBA9 3013 aa15.85■□□□□ 0.13
PNKP-202ENST00000593706 GDF9O60383 454 aa15.85■□□□□ 0.13
PNKP-202ENST00000593706 ATG13O75143 517 aa15.85■□□□□ 0.13
PNKP-202ENST00000593706 RPP40O75818 363 aaKnown RBP15.85■□□□□ 0.13
PNKP-202ENST00000593706 ITGB3P05106 788 aa15.85■□□□□ 0.13
PNKP-202ENST00000593706 CSH1P0DML2 217 aa15.85■□□□□ 0.13
PNKP-202ENST00000593706 CSH2P0DML3 217 aa15.85■□□□□ 0.13
PNKP-202ENST00000593706 POLR2BP30876 1174 aaKnown RBP15.85■□□□□ 0.13
PNKP-202ENST00000593706 HOXA6P31267 233 aa15.85■□□□□ 0.13
PNKP-202ENST00000593706 HOXC13P31276 330 aa15.85■□□□□ 0.13
PNKP-202ENST00000593706 DDIT3P35638 169 aa15.85■□□□□ 0.13
PNKP-202ENST00000593706 PXNP49023 591 aaPredicted RBP15.85■□□□□ 0.13
PNKP-202ENST00000593706 AMPD2Q01433 879 aa15.85■□□□□ 0.13
PNKP-202ENST00000593706 POU5F1Q01860 360 aaKnown RBP15.85■□□□□ 0.13
PNKP-202ENST00000593706 PKP1Q13835 747 aa15.85■□□□□ 0.13
PNKP-202ENST00000593706 TXNDC8Q6A555 127 aa15.85■□□□□ 0.13
PNKP-202ENST00000593706 IL31Q6EBC2 164 aa15.85■□□□□ 0.13
PNKP-202ENST00000593706 PKN3Q6P5Z2 889 aa15.85■□□□□ 0.13
PNKP-202ENST00000593706 NOC3LQ8WTT2 800 aaKnown RBP15.85■□□□□ 0.13
PNKP-202ENST00000593706 GAB3Q8WWW8 586 aa15.85■□□□□ 0.13
PNKP-202ENST00000593706 USP13Q92995 863 aaPredicted RBP15.85■□□□□ 0.13
PNKP-202ENST00000593706 FAM213AQ9BRX8 229 aa15.85■□□□□ 0.13
PNKP-202ENST00000593706 HPS4Q9NQG7 708 aa15.85■□□□□ 0.13
PNKP-202ENST00000593706 UXTQ9UBK9 157 aaPredicted RBP15.85■□□□□ 0.13
PNKP-202ENST00000593706 SEL1LQ9UBV2 794 aa15.85■□□□□ 0.13
PNKP-202ENST00000593706 CCDC39Q9UFE4 941 aa15.85■□□□□ 0.13
PNKP-202ENST00000593706 EXOC7Q9UPT5 735 aa15.85■□□□□ 0.13
PNKP-202ENST00000593706 ZFHX4Q86UP3 3567 aa15.85■□□□□ 0.13
PNKP-202ENST00000593706 AXIN1O15169 862 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 HUS1O60921 280 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 RNF40O75150 1001 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 F11P03951 625 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 ZSCAN22P10073 491 aaPredicted RBP15.84■□□□□ 0.13
PNKP-202ENST00000593706 HMGA1P17096 107 aaKnown RBP15.84■□□□□ 0.13
PNKP-202ENST00000593706 TXLNAP40222 546 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 GPR15P49685 360 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 MYL7Q01449 175 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 CCDC6Q16204 474 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 TMEM196Q5HYL7 178 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 SDHAF4Q5VUM1 108 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 FSTL4Q6MZW2 842 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 CRELD2Q6UXH1 353 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms