RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 DHX36Q9H2U1 1008 aaKnown RBP7.45□□□□□ -1.22
VMP1-215ENST00000592619 SPON1Q9HCB6 807 aa7.45□□□□□ -1.22
VMP1-215ENST00000592619 TMEM8AQ9HCN3 771 aa7.45□□□□□ -1.22
VMP1-215ENST00000592619 PLA2G3Q9NZ20 509 aa7.45□□□□□ -1.22
VMP1-215ENST00000592619 ANAPC4Q9UJX5 808 aa7.45□□□□□ -1.22
VMP1-215ENST00000592619 DISP1Q96F81 1524 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 SYT5O00445 386 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 NUAK1O60285 661 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 RASSF9O75901 435 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 KIF20AO95235 890 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 CKBP12277 381 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 GABRB3P28472 473 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 COPAP53621 1224 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 PPFIA1Q13136 1202 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 PTK2BQ14289 1009 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 SPARCL1Q14515 664 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 NT5DC1Q5TFE4 455 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 USP17L6PQ6QN14 398 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 MED25Q71SY5 747 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 TAX1BP1Q86VP1 789 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 RNF169Q8NCN4 708 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 CCDC150Q8NCX0 1101 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 FAM46DQ8NEK8 389 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 TBC1D20Q96BZ9 403 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 SNX27Q96L92 541 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 LRRC37BQ96QE4 947 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 MESP1Q9BRJ9 268 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 MEGF9Q9H1U4 602 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 OBP2BQ9NPH6 170 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 TBC1D23Q9NUY8 699 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 POGKQ9P215 609 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 HESX1Q9UBX0 185 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 ZNF69Q9UC07 566 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 MID2Q9UJV3 735 aa7.44□□□□□ -1.22
VMP1-215ENST00000592619 SAMD9Q5K651 1589 aa7.43□□□□□ -1.22
VMP1-215ENST00000592619 FAM234BA2RU67 622 aa7.43□□□□□ -1.22
VMP1-215ENST00000592619 LGALS16A8MUM7 142 aa7.43□□□□□ -1.22
VMP1-215ENST00000592619 PODXLO00592 558 aa7.43□□□□□ -1.22
VMP1-215ENST00000592619 CCP110O43303 1012 aa7.43□□□□□ -1.22
VMP1-215ENST00000592619 WDHD1O75717 1129 aaPredicted RBP7.43□□□□□ -1.22
VMP1-215ENST00000592619 NDST3O95803 873 aa7.43□□□□□ -1.22
VMP1-215ENST00000592619 ITGB1P05556 798 aa7.43□□□□□ -1.22
VMP1-215ENST00000592619 GCSHP23434 173 aa7.43□□□□□ -1.22
VMP1-215ENST00000592619 SERPINF1P36955 418 aa7.43□□□□□ -1.22
VMP1-215ENST00000592619 SLFN5Q08AF3 891 aa7.43□□□□□ -1.22
VMP1-215ENST00000592619 SLC29A2Q14542 456 aa7.43□□□□□ -1.22
VMP1-215ENST00000592619 RAB30Q15771 203 aa7.43□□□□□ -1.22
VMP1-215ENST00000592619 ZNF648Q5T619 568 aaPredicted RBP7.43□□□□□ -1.22
VMP1-215ENST00000592619 RRAGBQ5VZM2 374 aa7.43□□□□□ -1.22
VMP1-215ENST00000592619 FBXO38Q6PIJ6 1188 aa7.43□□□□□ -1.22
VMP1-215ENST00000592619 FAM9BQ8IZU0 186 aa7.43□□□□□ -1.22
VMP1-215ENST00000592619 GLIS1Q8NBF1 620 aa7.43□□□□□ -1.22
VMP1-215ENST00000592619 GCC1Q96CN9 775 aa7.43□□□□□ -1.22
VMP1-215ENST00000592619 LRRC46Q96FV0 321 aa7.43□□□□□ -1.22
VMP1-215ENST00000592619 DACT1Q9NYF0 836 aa7.43□□□□□ -1.22
VMP1-215ENST00000592619 RGL1Q9NZL6 768 aa7.43□□□□□ -1.22
VMP1-215ENST00000592619 SH3BP1Q9Y3L3 701 aa7.43□□□□□ -1.22
VMP1-215ENST00000592619 A0A087WZ62 844 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 LOC102723971A0A1B0GUV8 181 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 LAMTOR5O43504 91 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 PRSS23O95084 383 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 VEGFAP15692 232 aaPredicted RBP7.42□□□□□ -1.22
VMP1-215ENST00000592619 ACVR2AP27037 513 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 ELAVL1Q15717 326 aaKnown RBP7.42□□□□□ -1.22
VMP1-215ENST00000592619 NPY5RQ15761 445 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 DCAF17Q5H9S7 520 aaPredicted RBP7.42□□□□□ -1.22
VMP1-215ENST00000592619 NOMO2Q5JPE7 1267 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 OGFOD2Q6N063 350 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 ZDHHC24Q6UX98 284 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 CLEC4GQ6UXB4 293 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 KRBA2Q6ZNG9 492 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 KRT73Q86Y46 540 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 ELOA2Q8IYF1 753 aaPredicted RBP7.42□□□□□ -1.22
VMP1-215ENST00000592619 CFAP52Q8N1V2 620 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 ATG16L2Q8NAA4 619 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 FAM71BQ8TC56 605 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 TMEM176AQ96HP8 235 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 PPP1R9BQ96SB3 815 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 PAGR1Q9BTK6 254 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 MAGEH1Q9H213 219 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 ETAA1Q9NY74 926 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 GRHPRQ9UBQ7 328 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 HDAC9Q9UKV0 1011 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 SLC30A1Q9Y6M5 507 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 TNIKQ9UKE5 1360 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 EFCAB5A4FU69 1503 aa7.42□□□□□ -1.22
VMP1-215ENST00000592619 EXOC5O00471 708 aa7.41□□□□□ -1.22
VMP1-215ENST00000592619 ACKR2O00590 384 aa7.41□□□□□ -1.22
VMP1-215ENST00000592619 DHRS4L1P0CG22 281 aa7.41□□□□□ -1.22
VMP1-215ENST00000592619 IDEP14735 1019 aa7.41□□□□□ -1.22
VMP1-215ENST00000592619 CD53P19397 219 aa7.41□□□□□ -1.22
VMP1-215ENST00000592619 CHN2P52757 468 aa7.41□□□□□ -1.22
VMP1-215ENST00000592619 PIGFQ07326 219 aa7.41□□□□□ -1.22
VMP1-215ENST00000592619 ARHGEF7Q14155 803 aa7.41□□□□□ -1.22
VMP1-215ENST00000592619 INSCQ1MX18 579 aa7.41□□□□□ -1.22
VMP1-215ENST00000592619 ZFYVE27Q5T4F4 411 aa7.41□□□□□ -1.22
VMP1-215ENST00000592619 ARL6IP4Q66PJ3 421 aaKnown RBP7.41□□□□□ -1.22
VMP1-215ENST00000592619 CCDC70Q6NSX1 233 aa7.41□□□□□ -1.22
VMP1-215ENST00000592619 KIAA0408Q6ZU52 694 aa7.41□□□□□ -1.22
VMP1-215ENST00000592619 ANKRD18AQ8IVF6 992 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms