RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 LRSAM1Q6UWE0 723 aa22.15■■□□□ 1.14
DNMT1-227ENST00000592342 C4orf50Q6ZRC1 276 aa22.15■■□□□ 1.14
DNMT1-227ENST00000592342 SMRP1Q8NCR6 262 aa22.15■■□□□ 1.14
DNMT1-227ENST00000592342 LMO3Q8TAP4 145 aa22.15■■□□□ 1.14
DNMT1-227ENST00000592342 ATXN2LQ8WWM7 1075 aaKnown RBP22.15■■□□□ 1.14
DNMT1-227ENST00000592342 SEPT5Q99719 369 aaPredicted RBP22.15■■□□□ 1.14
DNMT1-227ENST00000592342 ADAM7Q9H2U9 754 aa22.15■■□□□ 1.14
DNMT1-227ENST00000592342 DPEP3Q9H4B8 488 aa22.15■■□□□ 1.14
DNMT1-227ENST00000592342 SLC27A5Q9Y2P5 690 aa22.15■■□□□ 1.14
DNMT1-227ENST00000592342 INSL5Q9Y5Q6 135 aa22.15■■□□□ 1.14
DNMT1-227ENST00000592342 CCL16O15467 120 aa22.14■■□□□ 1.13
DNMT1-227ENST00000592342 XYLBO75191 536 aa22.14■■□□□ 1.13
DNMT1-227ENST00000592342 ZNF18P17022 549 aa22.14■■□□□ 1.13
DNMT1-227ENST00000592342 PTPN1P18031 435 aaKnown RBP22.14■■□□□ 1.13
DNMT1-227ENST00000592342 CYP27A1Q02318 531 aa22.14■■□□□ 1.13
DNMT1-227ENST00000592342 PLD1Q13393 1074 aa22.14■■□□□ 1.13
DNMT1-227ENST00000592342 IQCB1Q15051 598 aa22.14■■□□□ 1.13
DNMT1-227ENST00000592342 MDH1BQ5I0G3 518 aa22.14■■□□□ 1.13
DNMT1-227ENST00000592342 ATAT1Q5SQI0 421 aa22.14■■□□□ 1.13
DNMT1-227ENST00000592342 PTCRAQ6ISU1 281 aaPredicted RBP22.14■■□□□ 1.13
DNMT1-227ENST00000592342 LUZP1Q86V48 1076 aa22.14■■□□□ 1.13
DNMT1-227ENST00000592342 ELMOD1Q8N336 334 aa22.14■■□□□ 1.13
DNMT1-227ENST00000592342 B3GALNT2Q8NCR0 500 aa22.14■■□□□ 1.13
DNMT1-227ENST00000592342 CMASQ8NFW8 434 aaPredicted RBP22.14■■□□□ 1.13
DNMT1-227ENST00000592342 FAM200AQ8TCP9 573 aa22.14■■□□□ 1.13
DNMT1-227ENST00000592342 SMG7Q92540 1137 aaKnown RBP22.14■■□□□ 1.13
DNMT1-227ENST00000592342 RIPOR3Q96MK2 946 aa22.14■■□□□ 1.13
DNMT1-227ENST00000592342 ARID3AQ99856 593 aa22.14■■□□□ 1.13
DNMT1-227ENST00000592342 NT5C1AQ9BXI3 368 aa22.14■■□□□ 1.13
DNMT1-227ENST00000592342 PRKD2Q9BZL6 878 aa22.14■■□□□ 1.13
DNMT1-227ENST00000592342 S1PR5Q9H228 398 aa22.14■■□□□ 1.13
DNMT1-227ENST00000592342 CRTAC1Q9NQ79 661 aa22.14■■□□□ 1.13
DNMT1-227ENST00000592342 CISHQ9NSE2 258 aa22.14■■□□□ 1.13
DNMT1-227ENST00000592342 TMLHEQ9NVH6 421 aa22.14■■□□□ 1.13
DNMT1-227ENST00000592342 LIMA1Q9UHB6 759 aaKnown RBP22.14■■□□□ 1.13
DNMT1-227ENST00000592342 NME7Q9Y5B8 376 aa22.14■■□□□ 1.13
DNMT1-227ENST00000592342 MBTPS2O43462 519 aa22.13■■□□□ 1.13
DNMT1-227ENST00000592342 CILPO75339 1184 aa22.13■■□□□ 1.13
DNMT1-227ENST00000592342 SLC9A1P19634 815 aa22.13■■□□□ 1.13
DNMT1-227ENST00000592342 HOXA9P31269 272 aa22.13■■□□□ 1.13
DNMT1-227ENST00000592342 ALDH1A3P47895 512 aa22.13■■□□□ 1.13
DNMT1-227ENST00000592342 TUFMP49411 452 aaKnown RBP22.13■■□□□ 1.13
DNMT1-227ENST00000592342 COPB1P53618 953 aaKnown RBP22.13■■□□□ 1.13
DNMT1-227ENST00000592342 INCA1Q0VD86 236 aa22.13■■□□□ 1.13
DNMT1-227ENST00000592342 ORC1Q13415 861 aa22.13■■□□□ 1.13
DNMT1-227ENST00000592342 FAM171BQ6P995 826 aa22.13■■□□□ 1.13
DNMT1-227ENST00000592342 TRIM65Q6PJ69 517 aa22.13■■□□□ 1.13
DNMT1-227ENST00000592342 GPR149Q86SP6 731 aa22.13■■□□□ 1.13
DNMT1-227ENST00000592342 ACOT1Q86TX2 421 aa22.13■■□□□ 1.13
DNMT1-227ENST00000592342 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.13■■□□□ 1.13
DNMT1-227ENST00000592342 MYCBPAPQ8TBZ2 947 aa22.13■■□□□ 1.13
DNMT1-227ENST00000592342 MYLPFQ96A32 169 aa22.13■■□□□ 1.13
DNMT1-227ENST00000592342 PKMYT1Q99640 499 aa22.13■■□□□ 1.13
DNMT1-227ENST00000592342 FAM124BQ9H5Z6 455 aaPredicted RBP22.13■■□□□ 1.13
DNMT1-227ENST00000592342 HSFX1Q9UBD0 423 aa22.13■■□□□ 1.13
DNMT1-227ENST00000592342 HMGXB4Q9UGU5 601 aa22.13■■□□□ 1.13
DNMT1-227ENST00000592342 USP15Q9Y4E8 981 aaPredicted RBP22.13■■□□□ 1.13
DNMT1-227ENST00000592342 YIPF1Q9Y548 306 aa22.13■■□□□ 1.13
DNMT1-227ENST00000592342 VNN2O95498 520 aa22.12■■□□□ 1.13
DNMT1-227ENST00000592342 ATP1A3P13637 1013 aa22.12■■□□□ 1.13
DNMT1-227ENST00000592342 MTHFRP42898 656 aa22.12■■□□□ 1.13
DNMT1-227ENST00000592342 TWF1Q12792 350 aa22.12■■□□□ 1.13
DNMT1-227ENST00000592342 CCDC142Q17RM4 750 aa22.12■■□□□ 1.13
DNMT1-227ENST00000592342 ZNF394Q53GI3 561 aa22.12■■□□□ 1.13
DNMT1-227ENST00000592342 CYP26C1Q6V0L0 522 aa22.12■■□□□ 1.13
DNMT1-227ENST00000592342 RRAGAQ7L523 313 aa22.12■■□□□ 1.13
DNMT1-227ENST00000592342 ARHGEF19Q8IW93 802 aa22.12■■□□□ 1.13
DNMT1-227ENST00000592342 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.12■■□□□ 1.13
DNMT1-227ENST00000592342 FUBP3Q96I24 572 aaKnown RBP eCLIP22.12■■□□□ 1.13
DNMT1-227ENST00000592342 HSD3B7Q9H2F3 369 aa22.12■■□□□ 1.13
DNMT1-227ENST00000592342 CRISPLD1Q9H336 500 aa22.12■■□□□ 1.13
DNMT1-227ENST00000592342 UBE2TQ9NPD8 197 aaPredicted RBP22.12■■□□□ 1.13
DNMT1-227ENST00000592342 GRXCR2A6NFK2 248 aa22.11■■□□□ 1.13
DNMT1-227ENST00000592342 HAPLN1P10915 354 aaPredicted RBP22.11■■□□□ 1.13
DNMT1-227ENST00000592342 PON1P27169 355 aa22.11■■□□□ 1.13
DNMT1-227ENST00000592342 KCNQ1P51787 676 aa22.11■■□□□ 1.13
DNMT1-227ENST00000592342 EPHB3P54753 998 aa22.11■■□□□ 1.13
DNMT1-227ENST00000592342 GCNT1Q02742 428 aa22.11■■□□□ 1.13
DNMT1-227ENST00000592342 IQCEQ6IPM2 695 aa22.11■■□□□ 1.13
DNMT1-227ENST00000592342 TTC9BQ8N6N2 239 aa22.11■■□□□ 1.13
DNMT1-227ENST00000592342 PCED1BQ96HM7 432 aa22.11■■□□□ 1.13
DNMT1-227ENST00000592342 FAM81BQ96LP2 452 aa22.11■■□□□ 1.13
DNMT1-227ENST00000592342 NECTIN4Q96NY8 510 aa22.11■■□□□ 1.13
DNMT1-227ENST00000592342 LPIN3Q9BQK8 851 aa22.11■■□□□ 1.13
DNMT1-227ENST00000592342 MED10Q9BTT4 135 aa22.11■■□□□ 1.13
DNMT1-227ENST00000592342 ABCB6Q9NP58 842 aa22.11■■□□□ 1.13
DNMT1-227ENST00000592342 ATP8B3O60423 1300 aa22.1■■□□□ 1.13
DNMT1-227ENST00000592342 MFAP3P55082 362 aa22.1■■□□□ 1.13
DNMT1-227ENST00000592342 CBX2Q14781 532 aaPredicted RBP22.1■■□□□ 1.13
DNMT1-227ENST00000592342 VEPH1Q14D04 833 aa22.1■■□□□ 1.13
DNMT1-227ENST00000592342 CFAP221Q4G0U5 840 aa22.1■■□□□ 1.13
DNMT1-227ENST00000592342 FILIP1LQ4L180 1135 aa22.1■■□□□ 1.13
DNMT1-227ENST00000592342 PHLDB3Q6NSJ2 640 aa22.1■■□□□ 1.13
DNMT1-227ENST00000592342 CRYBG2Q8N1P7 616 aa22.1■■□□□ 1.13
DNMT1-227ENST00000592342 ZNF707Q96C28 371 aaPredicted RBP22.1■■□□□ 1.13
DNMT1-227ENST00000592342 ZNF512Q96ME7 567 aaPredicted RBP22.1■■□□□ 1.13
DNMT1-227ENST00000592342 ASB2Q96Q27 587 aa22.1■■□□□ 1.13
DNMT1-227ENST00000592342 TWNKQ96RR1 684 aa22.1■■□□□ 1.13
DNMT1-227ENST00000592342 APEX2Q9UBZ4 518 aa22.1■■□□□ 1.13
DNMT1-227ENST00000592342 PCDHB4Q9Y5E5 795 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms