RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 SOAT2O75908 522 aa14.92□□□□□ -0.02
CLIP3-205ENST00000592017 EPB41P11171 864 aaKnown RBP14.92□□□□□ -0.02
CLIP3-205ENST00000592017 MYL4P12829 197 aa14.92□□□□□ -0.02
CLIP3-205ENST00000592017 PSMC2P35998 433 aaKnown RBP14.92□□□□□ -0.02
CLIP3-205ENST00000592017 AP3M2P53677 418 aa14.92□□□□□ -0.02
CLIP3-205ENST00000592017 PMS1P54277 932 aaKnown RBP14.92□□□□□ -0.02
CLIP3-205ENST00000592017 NCOA4Q13772 614 aa14.92□□□□□ -0.02
CLIP3-205ENST00000592017 SOWAHAQ2M3V2 549 aa14.92□□□□□ -0.02
CLIP3-205ENST00000592017 ZNF699Q32M78 642 aa14.92□□□□□ -0.02
CLIP3-205ENST00000592017 COBLL1Q53SF7 1204 aa14.92□□□□□ -0.02
CLIP3-205ENST00000592017 PHLDB3Q6NSJ2 640 aa14.92□□□□□ -0.02
CLIP3-205ENST00000592017 INTS8Q75QN2 995 aaKnown RBP14.92□□□□□ -0.02
CLIP3-205ENST00000592017 TMC8Q8IU68 726 aa14.92□□□□□ -0.02
CLIP3-205ENST00000592017 CCDC105Q8IYK2 499 aa14.92□□□□□ -0.02
CLIP3-205ENST00000592017 DCP1BQ8IZD4 617 aaKnown RBP14.92□□□□□ -0.02
CLIP3-205ENST00000592017 ADSSL1Q8N142 457 aa14.92□□□□□ -0.02
CLIP3-205ENST00000592017 DTWD2Q8NBA8 298 aa14.92□□□□□ -0.02
CLIP3-205ENST00000592017 SHKBP1Q8TBC3 707 aa14.92□□□□□ -0.02
CLIP3-205ENST00000592017 TMC2Q8TDI7 906 aa14.92□□□□□ -0.02
CLIP3-205ENST00000592017 ATOH1Q92858 354 aaPredicted RBP14.92□□□□□ -0.02
CLIP3-205ENST00000592017 SYAP1Q96A49 352 aaPredicted RBP14.92□□□□□ -0.02
CLIP3-205ENST00000592017 ELMO3Q96BJ8 720 aa14.92□□□□□ -0.02
CLIP3-205ENST00000592017 GTPBP4Q9BZE4 634 aaKnown RBP14.92□□□□□ -0.02
CLIP3-205ENST00000592017 NXF1Q9UBU9 619 aaKnown RBP14.92□□□□□ -0.02
CLIP3-205ENST00000592017 KMT2EQ8IZD2 1858 aa14.91□□□□□ -0.02
CLIP3-205ENST00000592017 CETN3O15182 167 aa14.91□□□□□ -0.02
CLIP3-205ENST00000592017 C4BPAP04003 597 aaKnown RBP14.91□□□□□ -0.02
CLIP3-205ENST00000592017 PIK3CAP42336 1068 aa14.91□□□□□ -0.02
CLIP3-205ENST00000592017 ALDH1A3P47895 512 aa14.91□□□□□ -0.02
CLIP3-205ENST00000592017 LHX1P48742 406 aa14.91□□□□□ -0.02
CLIP3-205ENST00000592017 EPHB3P54753 998 aa14.91□□□□□ -0.02
CLIP3-205ENST00000592017 PLD1Q13393 1074 aa14.91□□□□□ -0.02
CLIP3-205ENST00000592017 TEAD2Q15562 447 aa14.91□□□□□ -0.02
CLIP3-205ENST00000592017 CCDC142Q17RM4 750 aa14.91□□□□□ -0.02
CLIP3-205ENST00000592017 WDR72Q3MJ13 1102 aa14.91□□□□□ -0.02
CLIP3-205ENST00000592017 SLC44A4Q53GD3 710 aa14.91□□□□□ -0.02
CLIP3-205ENST00000592017 INTS6LQ5JSJ4 861 aaKnown RBP14.91□□□□□ -0.02
CLIP3-205ENST00000592017 SCARA5Q6ZMJ2 495 aa14.91□□□□□ -0.02
CLIP3-205ENST00000592017 DNAJB7Q7Z6W7 309 aaPredicted RBP14.91□□□□□ -0.02
CLIP3-205ENST00000592017 LEMD2Q8NC56 503 aa14.91□□□□□ -0.02
CLIP3-205ENST00000592017 FAM200AQ8TCP9 573 aa14.91□□□□□ -0.02
CLIP3-205ENST00000592017 ELSPBP1Q96BH3 223 aa14.91□□□□□ -0.02
CLIP3-205ENST00000592017 ASB16Q96NS5 453 aa14.91□□□□□ -0.02
CLIP3-205ENST00000592017 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.91□□□□□ -0.02
CLIP3-205ENST00000592017 ASAH2Q9NR71 780 aa14.91□□□□□ -0.02
CLIP3-205ENST00000592017 TMLHEQ9NVH6 421 aa14.91□□□□□ -0.02
CLIP3-205ENST00000592017 CTNND2Q9UQB3 1225 aa14.91□□□□□ -0.02
CLIP3-205ENST00000592017 SCN1AP35498 2009 aa14.91□□□□□ -0.02
CLIP3-205ENST00000592017 MAPK13O15264 365 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 VNN1O95497 513 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 CD44P16070 742 aaKnown RBP14.9□□□□□ -0.02
CLIP3-205ENST00000592017 PCSK1P29120 753 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 ATICP31939 592 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 VIPR2P41587 438 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 GCLMP48507 274 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 STARD6P59095 220 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 PSMC1P62191 440 aaKnown RBP14.9□□□□□ -0.02
CLIP3-205ENST00000592017 CLDN10P78369 228 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 MORC3Q14149 939 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 ZACNQ401N2 412 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 C1orf220Q5T0J3 134 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 ANKRD40Q6AI12 368 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 SV2AQ7L0J3 742 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 DPH6Q7L8W6 267 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 SPATA18Q8TC71 538 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 KBTBD7Q8WVZ9 684 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 GBP4Q96PP9 640 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 SYT15Q9BQS2 421 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 ACBD6Q9BR61 282 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 MRPL45Q9BRJ2 306 aaKnown RBP14.9□□□□□ -0.02
CLIP3-205ENST00000592017 FOXQ1Q9C009 403 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 XYLT2Q9H1B5 865 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 IRF2BPLQ9H1B7 796 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 SNX25Q9H3E2 840 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 SMYD3Q9H7B4 428 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 ZNF334Q9HCZ1 680 aaPredicted RBP14.9□□□□□ -0.02
CLIP3-205ENST00000592017 DLGAP2Q9P1A6 1054 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 PCDHB5Q9Y5E4 795 aa14.9□□□□□ -0.02
CLIP3-205ENST00000592017 A0A1W2PRU2 124 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 GABRDO14764 452 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 LRRN2O75325 713 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 HLA-DRAP01903 254 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 DCNP07585 359 aaKnown RBP14.89□□□□□ -0.03
CLIP3-205ENST00000592017 PDGFRBP09619 1106 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 RFX1P22670 979 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 WARSP23381 471 aaKnown RBP14.89□□□□□ -0.03
CLIP3-205ENST00000592017 CCNE1P24864 410 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 PPP1R2P41236 205 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 FKBP3Q00688 224 aaKnown RBP14.89□□□□□ -0.03
CLIP3-205ENST00000592017 LRRC63Q05C16 580 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 PPP3CAQ08209 521 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 SMARCB1Q12824 385 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 VEPH1Q14D04 833 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 MLF2Q15773 248 aaPredicted RBP14.89□□□□□ -0.03
CLIP3-205ENST00000592017 DCAF17Q5H9S7 520 aaPredicted RBP14.89□□□□□ -0.03
CLIP3-205ENST00000592017 ZNF667Q5HYK9 610 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 TCERG1LQ5VWI1 586 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 GAREM2Q75VX8 874 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 OR6B3Q8NGW1 331 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 ZSCAN18Q8TBC5 510 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms