RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 MAPK7Q13164 816 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 TEAD2Q15562 447 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 TAF12Q16514 161 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 IL17AQ16552 155 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 ARHGAP29Q52LW3 1261 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 HYIQ5T013 277 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 ARL6IP4Q66PJ3 421 aaKnown RBP10.22□□□□□ -0.77
BRCA1-226ENST00000591534 OVOS1Q6IE37 1185 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 TSSK4Q6SA08 328 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 TAS1R3Q7RTX0 852 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 METTL23Q86XA0 190 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 CCDC116Q8IYX3 515 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 SYNPOQ8N3V7 929 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 SPEM1Q8N4L4 309 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 TSEN2Q8NCE0 465 aaKnown RBP10.22□□□□□ -0.77
BRCA1-226ENST00000591534 EXOC4Q96A65 974 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 CALML4Q96GE6 196 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 ZBTB45Q96K62 511 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-226ENST00000591534 AK8Q96MA6 479 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 ZSCAN16Q9H4T2 348 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-226ENST00000591534 RPF1Q9H9Y2 349 aaKnown RBP10.22□□□□□ -0.77
BRCA1-226ENST00000591534 OBP2AQ9NY56 170 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 CEP72Q9P209 647 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 TUBGCP4Q9UGJ1 667 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 ODF2LQ9ULJ1 636 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 YIPF1Q9Y548 306 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 CACNA1AO00555 2505 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 A0A1W2PRU2 124 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 TTC26A0AVF1 554 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 PP2D1A8MPX8 630 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 LILRA1O75019 489 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 KRT18P05783 430 aaKnown RBP10.21□□□□□ -0.77
BRCA1-226ENST00000591534 RETP07949 1114 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 CXCL8P10145 99 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 CDC25AP30304 524 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 UBA7P41226 1012 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 VIPR2P41587 438 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 CCR2P41597 374 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 ATP2C1P98194 919 aaPredicted RBP10.21□□□□□ -0.77
BRCA1-226ENST00000591534 AMPD2Q01433 879 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 RAD51AP2Q09MP3 1159 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 DUSP4Q13115 394 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 FZD5Q13467 585 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 SIM2Q14190 667 aaPredicted RBP10.21□□□□□ -0.77
BRCA1-226ENST00000591534 SWI5Q1ZZU3 235 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 LARP1BQ659C4 914 aaKnown RBP10.21□□□□□ -0.77
BRCA1-226ENST00000591534 PRR23BQ6ZRT6 265 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 RALGPS2Q86X27 583 aaPredicted RBP10.21□□□□□ -0.77
BRCA1-226ENST00000591534 THEM5Q8N1Q8 247 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 RASSF8Q8NHQ8 419 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 DDX1Q92499 740 aaKnown RBP10.21□□□□□ -0.77
BRCA1-226ENST00000591534 KCNN1Q92952 543 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 ZSWIM3Q96MP5 696 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 DERAQ9Y315 318 aa10.21□□□□□ -0.77
BRCA1-226ENST00000591534 VWA3AA6NCI4 1184 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 TMEM229AB2RXF0 380 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 OGTO15294 1046 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 FAM13AO94988 1023 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 PAPSS2O95340 614 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-226ENST00000591534 BMP15O95972 392 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 CHRNB1P11230 501 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 CDC25CP30307 473 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 AARSP49588 968 aaKnown RBP eCLIP10.2□□□□□ -0.78
BRCA1-226ENST00000591534 ATXN1P54253 815 aaKnown RBP10.2□□□□□ -0.78
BRCA1-226ENST00000591534 SLC12A3P55017 1021 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 NCKAP1LP55160 1127 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 DHX9Q08211 1270 aaKnown RBP10.2□□□□□ -0.78
BRCA1-226ENST00000591534 FCHO2Q0JRZ9 810 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 ZBTB6Q15916 424 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 SEZ6Q53EL9 994 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 TMCO4Q5TGY1 634 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 SLFN12LQ6IEE8 588 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 CENPPQ6IPU0 288 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-226ENST00000591534 DNAJB7Q7Z6W7 309 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-226ENST00000591534 LONP2Q86WA8 852 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 ARID3BQ8IVW6 561 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-226ENST00000591534 MYCT1Q8N699 235 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 SHKBP1Q8TBC3 707 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 NETO1Q8TDF5 533 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 C2orf15Q8WU43 125 aaKnown RBP10.2□□□□□ -0.78
BRCA1-226ENST00000591534 PSMG2Q969U7 264 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 PGLYRP2Q96PD5 576 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 MMTAG2Q9BU76 263 aaKnown RBP10.2□□□□□ -0.78
BRCA1-226ENST00000591534 MSTO1Q9BUK6 570 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 ATXN3LQ9H3M9 355 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 PARVGQ9HBI0 331 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 ZNF358Q9NW07 568 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 TBX20Q9UMR3 447 aa10.2□□□□□ -0.78
BRCA1-226ENST00000591534 TIMM13Q9Y5L4 95 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-226ENST00000591534 MYBPHLA2RUH7 354 aa10.19□□□□□ -0.78
BRCA1-226ENST00000591534 LACTBL1A8MY62 500 aa10.19□□□□□ -0.78
BRCA1-226ENST00000591534 K7ENM7 598 aa10.19□□□□□ -0.78
BRCA1-226ENST00000591534 STX6O43752 255 aa10.19□□□□□ -0.78
BRCA1-226ENST00000591534 ATG13O75143 517 aa10.19□□□□□ -0.78
BRCA1-226ENST00000591534 TBCAO75347 108 aaKnown RBP10.19□□□□□ -0.78
BRCA1-226ENST00000591534 MOSPD3O75425 235 aa10.19□□□□□ -0.78
BRCA1-226ENST00000591534 PIGRP01833 764 aa10.19□□□□□ -0.78
BRCA1-226ENST00000591534 GJA1P17302 382 aa10.19□□□□□ -0.78
BRCA1-226ENST00000591534 WEE1P30291 646 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms