RNA–Protein interactions for RNA: ENST00000591115.5

PTPN2-210, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-210ENST00000591115 BEST2Q8NFU1 509 aa10.55□□□□□ -0.72
PTPN2-210ENST00000591115 WHAMMQ8TF30 809 aa10.55□□□□□ -0.72
PTPN2-210ENST00000591115 TFAP2BQ92481 460 aa10.55□□□□□ -0.72
PTPN2-210ENST00000591115 TMEM176AQ96HP8 235 aa10.55□□□□□ -0.72
PTPN2-210ENST00000591115 BTBD6Q96KE9 485 aa10.55□□□□□ -0.72
PTPN2-210ENST00000591115 TRIM6Q9C030 488 aaPredicted RBP10.55□□□□□ -0.72
PTPN2-210ENST00000591115 DDX47Q9H0S4 455 aaKnown RBP10.55□□□□□ -0.72
PTPN2-210ENST00000591115 SDCBP2Q9H190 292 aa10.55□□□□□ -0.72
PTPN2-210ENST00000591115 MED4Q9NPJ6 270 aa10.55□□□□□ -0.72
PTPN2-210ENST00000591115 WDR35Q9P2L0 1181 aa10.55□□□□□ -0.72
PTPN2-210ENST00000591115 BARX2Q9UMQ3 279 aaPredicted RBP10.55□□□□□ -0.72
PTPN2-210ENST00000591115 TRPV2Q9Y5S1 764 aa10.55□□□□□ -0.72
PTPN2-210ENST00000591115 TMEM191CA6NGB0 347 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 CCDC85CA6NKD9 419 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 DCDC2CA8MYV0 355 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 M0QZ92 97 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 TLR3O15455 904 aaKnown RBP10.54□□□□□ -0.72
PTPN2-210ENST00000591115 PHF2O75151 1096 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 PYGMP11217 842 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 ITGA4P13612 1032 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 MARCKSL1P49006 195 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 ZNF211Q13398 564 aaPredicted RBP10.54□□□□□ -0.72
PTPN2-210ENST00000591115 MBTPS1Q14703 1052 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 CNGA2Q16280 664 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 ZNF394Q53GI3 561 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 XKR4Q5GH76 650 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 LRRC38Q5VT99 294 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 DNAJC24Q6P3W2 148 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 TRAF7Q6Q0C0 670 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 RPAINQ86UA6 219 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 ERICH1Q86X53 443 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 SLC13A5Q86YT5 568 aaPredicted RBP10.54□□□□□ -0.72
PTPN2-210ENST00000591115 RHOT1Q8IXI2 618 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 MREGQ8N565 214 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 WDTC1Q8N5D0 677 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 SLC4A11Q8NBS3 891 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 C3orf20Q8ND61 904 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 C1orf131Q8NDD1 294 aaKnown RBP10.54□□□□□ -0.72
PTPN2-210ENST00000591115 SEZ6LQ9BYH1 1024 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 CELF4Q9BZC1 486 aaKnown RBP10.54□□□□□ -0.72
PTPN2-210ENST00000591115 RAB17Q9H0T7 212 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 SMYD3Q9H7B4 428 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 SNTG2Q9NY99 539 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 PCYOX1Q9UHG3 505 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 HPCAL4Q9UM19 191 aa10.54□□□□□ -0.72
PTPN2-210ENST00000591115 UBQLN1Q9UMX0 589 aaKnown RBP10.54□□□□□ -0.72
PTPN2-210ENST00000591115 TNRC18O15417 2968 aaPredicted RBP10.54□□□□□ -0.72
PTPN2-210ENST00000591115 FAM170AA1A519 330 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 FSCN2O14926 492 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 CLTBP09497 229 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 GHRP10912 638 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 KCNE1P15382 129 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 CD19P15391 556 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 ATF7P17544 494 aaPredicted RBP10.53□□□□□ -0.72
PTPN2-210ENST00000591115 GBP1P32455 592 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 CARSP49589 748 aaKnown RBP10.53□□□□□ -0.72
PTPN2-210ENST00000591115 DRG2P55039 364 aaKnown RBP10.53□□□□□ -0.72
PTPN2-210ENST00000591115 CDH8P55286 799 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 GABPB1Q06547 395 aaPredicted RBP10.53□□□□□ -0.72
PTPN2-210ENST00000591115 PIGHQ14442 188 aaPredicted RBP10.53□□□□□ -0.72
PTPN2-210ENST00000591115 PPP1R15BQ5SWA1 713 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 SND1Q7KZF4 910 aaKnown RBP eCLIP10.53□□□□□ -0.72
PTPN2-210ENST00000591115 KATNAL2Q8IYT4 538 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 TNS4Q8IZW8 715 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 NIPA2Q8N8Q9 360 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 C12orf50Q8NA57 414 aaPredicted RBP10.53□□□□□ -0.72
PTPN2-210ENST00000591115 CASKIN2Q8WXE0 1202 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 TOX2Q96NM4 488 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 EIF2AQ9BY44 585 aaKnown RBP10.53□□□□□ -0.72
PTPN2-210ENST00000591115 PPP1R12CQ9BZL4 782 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 ELOVL4Q9GZR5 314 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 MIS12Q9H081 205 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 PRDM5Q9NQX1 630 aaPredicted RBP10.53□□□□□ -0.72
PTPN2-210ENST00000591115 FAM114A2Q9NRY5 505 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 AMACRQ9UHK6 382 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 RASAL2Q9UJF2 1139 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 TBX21Q9UL17 535 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 PIN4Q9Y237 131 aaKnown RBP10.53□□□□□ -0.72
PTPN2-210ENST00000591115 UTP11Q9Y3A2 253 aaKnown RBP10.53□□□□□ -0.72
PTPN2-210ENST00000591115 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.53□□□□□ -0.72
PTPN2-210ENST00000591115 CITO14578 2027 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 MICAL3Q7RTP6 2002 aa10.53□□□□□ -0.72
PTPN2-210ENST00000591115 RANBP2P49792 3224 aaKnown RBP10.52□□□□□ -0.73
PTPN2-210ENST00000591115 PODXLO00592 558 aa10.52□□□□□ -0.73
PTPN2-210ENST00000591115 CAND2O75155 1236 aa10.52□□□□□ -0.73
PTPN2-210ENST00000591115 RECQL4O94761 1208 aa10.52□□□□□ -0.73
PTPN2-210ENST00000591115 CAPN2P17655 700 aa10.52□□□□□ -0.73
PTPN2-210ENST00000591115 CYP3A5P20815 502 aa10.52□□□□□ -0.73
PTPN2-210ENST00000591115 CETN2P41208 172 aa10.52□□□□□ -0.73
PTPN2-210ENST00000591115 PNPLA4P41247 253 aa10.52□□□□□ -0.73
PTPN2-210ENST00000591115 RAP1GAPP47736 663 aa10.52□□□□□ -0.73
PTPN2-210ENST00000591115 FNTAP49354 379 aa10.52□□□□□ -0.73
PTPN2-210ENST00000591115 MRPS25P82663 173 aaKnown RBP10.52□□□□□ -0.73
PTPN2-210ENST00000591115 DR1Q01658 176 aa10.52□□□□□ -0.73
PTPN2-210ENST00000591115 ZNF268Q14587 947 aaPredicted RBP10.52□□□□□ -0.73
PTPN2-210ENST00000591115 SGO2Q562F6 1265 aa10.52□□□□□ -0.73
PTPN2-210ENST00000591115 HSP90B2PQ58FF3 399 aa10.52□□□□□ -0.73
PTPN2-210ENST00000591115 UBXN11Q5T124 520 aa10.52□□□□□ -0.73
PTPN2-210ENST00000591115 ALS2CLQ60I27 953 aa10.52□□□□□ -0.73
PTPN2-210ENST00000591115 DENND1BQ6P3S1 775 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms