RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 HAPLN1P10915 354 aaPredicted RBP12.71□□□□□ -0.37
LIG3-213ENST00000590630 ERCC5P28715 1186 aaPredicted RBP12.71□□□□□ -0.37
LIG3-213ENST00000590630 GBP2P32456 591 aaPredicted RBP12.71□□□□□ -0.37
LIG3-213ENST00000590630 ASPAP45381 313 aa12.71□□□□□ -0.37
LIG3-213ENST00000590630 NTHL1P78549 312 aa12.71□□□□□ -0.37
LIG3-213ENST00000590630 VEPH1Q14D04 833 aa12.71□□□□□ -0.37
LIG3-213ENST00000590630 CBWD6Q4V339 395 aa12.71□□□□□ -0.37
LIG3-213ENST00000590630 CT47A1Q5JQC4 288 aaPredicted RBP12.71□□□□□ -0.37
LIG3-213ENST00000590630 CBWD3Q5JTY5 395 aa12.71□□□□□ -0.37
LIG3-213ENST00000590630 CBWD5Q5RIA9 395 aa12.71□□□□□ -0.37
LIG3-213ENST00000590630 SCARA5Q6ZMJ2 495 aa12.71□□□□□ -0.37
LIG3-213ENST00000590630 C4orf50Q6ZRC1 276 aa12.71□□□□□ -0.37
LIG3-213ENST00000590630 GET4Q7L5D6 327 aaPredicted RBP12.71□□□□□ -0.37
LIG3-213ENST00000590630 ITIH5Q86UX2 942 aa12.71□□□□□ -0.37
LIG3-213ENST00000590630 TTC9BQ8N6N2 239 aa12.71□□□□□ -0.37
LIG3-213ENST00000590630 SEPT5Q99719 369 aaPredicted RBP12.71□□□□□ -0.37
LIG3-213ENST00000590630 CORO1BQ9BR76 489 aa12.71□□□□□ -0.37
LIG3-213ENST00000590630 PI4K2AQ9BTU6 479 aa12.71□□□□□ -0.37
LIG3-213ENST00000590630 SRRTQ9BXP5 876 aaKnown RBP12.71□□□□□ -0.37
LIG3-213ENST00000590630 BCO2Q9BYV7 579 aa12.71□□□□□ -0.37
LIG3-213ENST00000590630 NIF3L1Q9GZT8 377 aa12.71□□□□□ -0.37
LIG3-213ENST00000590630 ASAH2Q9NR71 780 aa12.71□□□□□ -0.37
LIG3-213ENST00000590630 TMLHEQ9NVH6 421 aa12.71□□□□□ -0.37
LIG3-213ENST00000590630 RAB20Q9NX57 234 aa12.71□□□□□ -0.37
LIG3-213ENST00000590630 CEP72Q9P209 647 aa12.71□□□□□ -0.37
LIG3-213ENST00000590630 EPS15L1Q9UBC2 864 aa12.71□□□□□ -0.37
LIG3-213ENST00000590630 GTF3C4Q9UKN8 822 aa12.71□□□□□ -0.37
LIG3-213ENST00000590630 COQ4Q9Y3A0 265 aa12.71□□□□□ -0.37
LIG3-213ENST00000590630 MYBPHLA2RUH7 354 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 ZNF197O14709 1029 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 PMM2O15305 246 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 N4BP1O75113 896 aaKnown RBP12.7□□□□□ -0.38
LIG3-213ENST00000590630 MICAL2O94851 1124 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 ALADP13716 330 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 FMO5P49326 533 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 EPHA5P54756 1037 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 CDH8P55286 799 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 PSMC1P62191 440 aaKnown RBP12.7□□□□□ -0.38
LIG3-213ENST00000590630 WDR44Q5JSH3 913 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 CCDC183Q5T5S1 534 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 CYP4A22Q5TCH4 519 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 SPOPLQ6IQ16 392 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 PDZD4Q76G19 769 aaPredicted RBP12.7□□□□□ -0.38
LIG3-213ENST00000590630 SPATA2LQ8IUW3 424 aaPredicted RBP12.7□□□□□ -0.38
LIG3-213ENST00000590630 TRIM59Q8IWR1 403 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 B3GALNT2Q8NCR0 500 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 MYCBPAPQ8TBZ2 947 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 SEMA4DQ92854 862 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 PSMG2Q969U7 264 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 TNIP3Q96KP6 325 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 DNAJC25Q9H1X3 360 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 FAM124BQ9H5Z6 455 aaPredicted RBP12.7□□□□□ -0.38
LIG3-213ENST00000590630 CYP3A43Q9HB55 503 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 CRTAC1Q9NQ79 661 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 CDH7Q9ULB5 785 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 MRPS23Q9Y3D9 190 aaKnown RBP12.7□□□□□ -0.38
LIG3-213ENST00000590630 OBSL1O75147 1896 aa12.7□□□□□ -0.38
LIG3-213ENST00000590630 ZNF638Q14966 1978 aaKnown RBP12.69□□□□□ -0.38
LIG3-213ENST00000590630 P4HA2O15460 535 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 DCXO43602 365 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 ATP2C2O75185 946 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 SOAT2O75908 522 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 FGF19O95750 216 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 LAMP2P13473 410 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 PTPN1P18031 435 aaKnown RBP12.69□□□□□ -0.38
LIG3-213ENST00000590630 ATF6P18850 670 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 TRIM21P19474 475 aaKnown RBP12.69□□□□□ -0.38
LIG3-213ENST00000590630 CYP2F1P24903 491 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 MAGEA11P43364 429 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 RAP1GAPP47736 663 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 RPL10AP62906 217 aaKnown RBP12.69□□□□□ -0.38
LIG3-213ENST00000590630 INCA1Q0VD86 236 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 CETN1Q12798 172 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 SLC5A9Q2M3M2 681 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 PRSS36Q5K4E3 855 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 VSTM1Q6UX27 236 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 UNC93AQ86WB7 457 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 TTC39CQ8N584 583 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 ITFG1Q8TB96 612 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 FGF13Q92913 245 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 NXPE3Q969Y0 559 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 MYLPFQ96A32 169 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 ELMO3Q96BJ8 720 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 PCED1BQ96HM7 432 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 CEP295NLQ96MC4 621 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 MED15Q96RN5 788 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 MYADMQ96S97 322 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 DNAI2Q9GZS0 605 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 SDCBP2Q9H190 292 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 APOBEC3GQ9HC16 384 aaKnown RBP12.69□□□□□ -0.38
LIG3-213ENST00000590630 GDE1Q9NZC3 331 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 MAGEC2Q9UBF1 373 aaPredicted RBP12.69□□□□□ -0.38
LIG3-213ENST00000590630 LIMD1Q9UGP4 676 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 MUTYHQ9UIF7 546 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 NME7Q9Y5B8 376 aa12.69□□□□□ -0.38
LIG3-213ENST00000590630 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.69□□□□□ -0.38
LIG3-213ENST00000590630 PI4K2BG5E9Z4 385 aa12.68□□□□□ -0.38
LIG3-213ENST00000590630 CDR1P51861 262 aa12.68□□□□□ -0.38
LIG3-213ENST00000590630 CYP27A1Q02318 531 aa12.68□□□□□ -0.38
LIG3-213ENST00000590630 PTPN21Q16825 1174 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms