RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 DCLK3Q9C098 648 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 NIF3L1Q9GZT8 377 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 CCDC113Q9H0I3 377 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 EFCC1Q9HA90 598 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 CAPN10Q9HC96 672 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 RAB6BQ9NRW1 208 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 DDX56Q9NY93 547 aaKnown RBP7.83□□□□□ -1.16
ZNF540-206ENST00000589117 STRIP2Q9ULQ0 834 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 PCDHGB7Q9Y5F8 929 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 PHIPQ8WWQ0 1821 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 GSTTP1A0A1W2PQM5 241 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 SMIM23A6NLE4 172 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 OGTO15294 1046 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 ASAP2O43150 1006 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 MED7O43513 233 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 SORBS3O60504 671 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 FSBPO95073 299 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 VNN1O95497 513 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 TTC4O95801 387 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 SLC25A27O95847 323 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 TNNC2P02585 160 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 RALAP11233 206 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 ATP4AP20648 1035 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 FGFR4P22455 802 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 SLC26A2P50443 739 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 IRX3P78415 501 aaPredicted RBP7.83□□□□□ -1.16
ZNF540-206ENST00000589117 MCL1Q07820 350 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 PIGHQ14442 188 aaPredicted RBP7.83□□□□□ -1.16
ZNF540-206ENST00000589117 TARBP2Q15633 366 aaKnown RBP7.83□□□□□ -1.16
ZNF540-206ENST00000589117 DEFB132Q7Z7B7 95 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 NCAPG2Q86XI2 1143 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 BRSK2Q8IWQ3 736 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 PRPF31Q8WWY3 499 aaKnown RBP7.83□□□□□ -1.16
ZNF540-206ENST00000589117 SEC16BQ96JE7 1060 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 CFHR5Q9BXR6 569 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 GGA3Q9NZ52 723 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 GPRC5DQ9NZD1 345 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 PRKAG2Q9UGJ0 569 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 DDX20Q9UHI6 824 aaKnown RBP7.83□□□□□ -1.16
ZNF540-206ENST00000589117 ADGRA2Q96PE1 1338 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 C5orf60A6NFR6 353 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 FARP2O94887 1054 aaPredicted RBP7.82□□□□□ -1.16
ZNF540-206ENST00000589117 ASS1P00966 412 aaKnown RBP7.82□□□□□ -1.16
ZNF540-206ENST00000589117 TMEM191BP0C7N4 346 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 HARSP12081 509 aaKnown RBP7.82□□□□□ -1.16
ZNF540-206ENST00000589117 CHN1P15882 459 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 UBA1P22314 1058 aaKnown RBP7.82□□□□□ -1.16
ZNF540-206ENST00000589117 MMP8P22894 467 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 EIF4BP23588 611 aaKnown RBP7.82□□□□□ -1.16
ZNF540-206ENST00000589117 TCF7P36402 384 aaPredicted RBP7.82□□□□□ -1.16
ZNF540-206ENST00000589117 PLCB3Q01970 1234 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 CNTN2Q02246 1040 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 NFX1Q12986 1120 aaKnown RBP7.82□□□□□ -1.16
ZNF540-206ENST00000589117 PRAMEF18Q5VWM3 479 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 SPOPLQ6IQ16 392 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 DNAJC24Q6P3W2 148 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 MMS22LQ6ZRQ5 1243 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 PASD1Q8IV76 773 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 ZDHHC14Q8IZN3 488 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 GPC2Q8N158 579 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 CCDC197Q8NCU1 140 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 FAXDC2Q96IV6 333 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 ANKRD36BP1Q96IX9 119 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 ZBTB45Q96K62 511 aaPredicted RBP7.82□□□□□ -1.16
ZNF540-206ENST00000589117 PLCD4Q9BRC7 762 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 EPB41L4BQ9H329 900 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 CDC42EP4Q9H3Q1 356 aaKnown RBP7.82□□□□□ -1.16
ZNF540-206ENST00000589117 CCDC134Q9H6E4 229 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 CAPN7Q9Y6W3 813 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 GOLGB1Q14789 3259 aaKnown RBP7.82□□□□□ -1.16
ZNF540-206ENST00000589117 FER1L6Q2WGJ9 1857 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 CNTNAP2Q9UHC6 1331 aa7.82□□□□□ -1.16
ZNF540-206ENST00000589117 TCEA3O75764 348 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 ACSL3O95573 720 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 CTSHP09668 335 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 EDNRBP24530 442 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 ITGA8P53708 1063 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 CAPSQ13938 189 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 STAT4Q14765 748 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 ZNF394Q53GI3 561 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 DRICH1Q6PGQ1 229 aaPredicted RBP7.81□□□□□ -1.16
ZNF540-206ENST00000589117 POTEAQ6S8J7 498 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 PLPPR4Q7Z2D5 763 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 ERICH1Q86X53 443 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 RELL1Q8IUW5 271 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 RIBC1Q8N443 379 aaPredicted RBP7.81□□□□□ -1.16
ZNF540-206ENST00000589117 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.81□□□□□ -1.16
ZNF540-206ENST00000589117 CFAP57Q96MR6 1250 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 TTC25Q96NG3 672 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 C2orf49Q9BVC5 232 aaPredicted RBP7.81□□□□□ -1.16
ZNF540-206ENST00000589117 HEMGNQ9BXL5 484 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 FRMD8P1Q9BZ68 369 aaPredicted RBP7.81□□□□□ -1.16
ZNF540-206ENST00000589117 SPATC1LQ9H0A9 340 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 PPCSQ9HAB8 311 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 CHST7Q9NS84 486 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 ZNF148Q9UQR1 794 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 NUB1Q9Y5A7 615 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 TMEM191CA6NGB0 347 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 DCDC2CA8MYV0 355 aa7.81□□□□□ -1.16
ZNF540-206ENST00000589117 CDH16O75309 829 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms