RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 CGRRF1Q99675 332 aa9.08□□□□□ -0.96
NEDD4L-218ENST00000587547 HSD3B7Q9H2F3 369 aa9.08□□□□□ -0.96
NEDD4L-218ENST00000587547 PLEKHA5Q9HAU0 1116 aa9.08□□□□□ -0.96
NEDD4L-218ENST00000587547 UBN1Q9NPG3 1134 aa9.08□□□□□ -0.96
NEDD4L-218ENST00000587547 ENTPD7Q9NQZ7 604 aa9.08□□□□□ -0.96
NEDD4L-218ENST00000587547 AAASQ9NRG9 546 aa9.08□□□□□ -0.96
NEDD4L-218ENST00000587547 DNAAF2Q9NVR5 837 aaKnown RBP9.08□□□□□ -0.96
NEDD4L-218ENST00000587547 MIOSQ9NXC5 875 aa9.08□□□□□ -0.96
NEDD4L-218ENST00000587547 FBXL21Q9UKT6 434 aa9.08□□□□□ -0.96
NEDD4L-218ENST00000587547 DUSP12Q9UNI6 340 aa9.08□□□□□ -0.96
NEDD4L-218ENST00000587547 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.08□□□□□ -0.96
NEDD4L-218ENST00000587547 HCFC2Q9Y5Z7 792 aa9.08□□□□□ -0.96
NEDD4L-218ENST00000587547 PTPRJQ12913 1337 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 SMIM28A0A1B0GU29 152 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 KRBA1A5PL33 1030 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 PTGESO14684 152 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 NARSO43776 548 aaKnown RBP9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 TNNC2P02585 160 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 TPM2P07951 284 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 SP9P0CG40 484 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 ZNF18P17022 549 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 MTHFRP42898 656 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 GCLMP48507 274 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 ATP1A2P50993 1020 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 COPB1P53618 953 aaKnown RBP9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 MARSP56192 900 aaKnown RBP9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 RNASELQ05823 741 aaKnown RBP9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 ITIH3Q06033 890 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 BIRC3Q13489 604 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 MAN2A1Q16706 1144 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 ZC3H14Q6PJT7 736 aaKnown RBP9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 ALKAL1Q6UXT8 129 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 WDR49Q8IV35 697 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 TRIM59Q8IWR1 403 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 CD302Q8IX05 232 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 OR5B17Q8NGF7 314 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 PARD3BQ8TEW8 1205 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 CACTINQ8WUQ7 758 aaKnown RBP9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 C18orf25Q96B23 403 aaPredicted RBP9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 ANKRD36BP1Q96IX9 119 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 ZMAT2Q96NC0 199 aaKnown RBP9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 CASD1Q96PB1 797 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 FAM193BQ96PV7 902 aaPredicted RBP9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 TUBGCP2Q9BSJ2 902 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 MTMR12Q9C0I1 747 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 TMEM117Q9H0C3 514 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 VPS16Q9H269 839 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 ASB7Q9H672 318 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 TBC1D13Q9NVG8 400 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 INTS13Q9NVM9 706 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 CNTN3Q9P232 1028 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 CACNG4Q9UBN1 327 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 TUBGCP4Q9UGJ1 667 aa9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 CDV3Q9UKY7 258 aaKnown RBP9.07□□□□□ -0.96
NEDD4L-218ENST00000587547 CASTOR2A6NHX0 329 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 XPOTO43592 962 aaKnown RBP9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 STX10O60499 249 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 PHACTR2O75167 634 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 SERPINC1P01008 464 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 AFPP02771 609 aaKnown RBP9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 THP07101 528 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 DCNP07585 359 aaKnown RBP9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 KRT19P08727 400 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 KCNE1P15382 129 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 PBX3P40426 434 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 MXI1P50539 228 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 SKOR1P84550 965 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 FANCCQ00597 558 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 MYL7Q01449 175 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 POU5F1Q01860 360 aaKnown RBP9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 SOX4Q06945 474 aaPredicted RBP9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 PPP3CAQ08209 521 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 GRIK3Q13003 919 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 TDGQ13569 410 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 ACAP1Q15027 740 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 DUOXA2Q1HG44 320 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 XKR4Q5GH76 650 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 C1orf220Q5T0J3 134 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 KIAA1841Q6NSI8 718 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 GSTCDQ8NEC7 633 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 BEST2Q8NFU1 509 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 RABGGTAQ92696 567 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 SLC35C1Q96A29 364 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 COL26A1Q96A83 441 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 PPP1R10Q96QC0 940 aaKnown RBP9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 MRPL9Q9BYD2 267 aaKnown RBP9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 CWH43Q9H720 699 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 GOLGA2P5Q9HBQ8 144 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 SLC38A7Q9NVC3 462 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 DPP3Q9NY33 737 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 KANSL3Q9P2N6 904 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 LIMA1Q9UHB6 759 aaKnown RBP9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 UBQLN1Q9UMX0 589 aaKnown RBP9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 LZTS1Q9Y250 596 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 DERAQ9Y315 318 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 C2CD2Q9Y426 696 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 PCDHB11Q9Y5F2 797 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 FAM208BQ5VWN6 2430 aa9.06□□□□□ -0.96
NEDD4L-218ENST00000587547 FANCMQ8IYD8 2048 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms