RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 UBA7P41226 1012 aa17.62■□□□□ 0.41
NPC1-205ENST00000587163 GALK1P51570 392 aa17.62■□□□□ 0.41
NPC1-205ENST00000587163 GRIN1Q05586 938 aa17.62■□□□□ 0.41
NPC1-205ENST00000587163 STPG1Q5TH74 334 aa17.62■□□□□ 0.41
NPC1-205ENST00000587163 SDHAF4Q5VUM1 108 aa17.62■□□□□ 0.41
NPC1-205ENST00000587163 SCARA3Q6AZY7 606 aa17.62■□□□□ 0.41
NPC1-205ENST00000587163 EFCAB13Q8IY85 973 aa17.62■□□□□ 0.41
NPC1-205ENST00000587163 CALML4Q96GE6 196 aa17.62■□□□□ 0.41
NPC1-205ENST00000587163 AK8Q96MA6 479 aa17.62■□□□□ 0.41
NPC1-205ENST00000587163 CCSER1Q9C0I3 900 aa17.62■□□□□ 0.41
NPC1-205ENST00000587163 STYXL1Q9Y6J8 313 aa17.62■□□□□ 0.41
NPC1-205ENST00000587163 TCHHQ07283 1943 aa17.62■□□□□ 0.41
NPC1-205ENST00000587163 OBSL1O75147 1896 aa17.61■□□□□ 0.41
NPC1-205ENST00000587163 KPNA7A9QM74 516 aa17.61■□□□□ 0.41
NPC1-205ENST00000587163 KRT18P05783 430 aaKnown RBP17.61■□□□□ 0.41
NPC1-205ENST00000587163 PLCG1P19174 1290 aa17.61■□□□□ 0.41
NPC1-205ENST00000587163 SMARCB1Q12824 385 aa17.61■□□□□ 0.41
NPC1-205ENST00000587163 BFSP1Q12934 665 aa17.61■□□□□ 0.41
NPC1-205ENST00000587163 KARSQ15046 597 aaKnown RBP17.61■□□□□ 0.41
NPC1-205ENST00000587163 DCP1BQ8IZD4 617 aaKnown RBP17.61■□□□□ 0.41
NPC1-205ENST00000587163 RAD54LQ92698 747 aa17.61■□□□□ 0.41
NPC1-205ENST00000587163 ZC3H10Q96K80 434 aaKnown RBP17.61■□□□□ 0.41
NPC1-205ENST00000587163 PI4K2AQ9BTU6 479 aa17.61■□□□□ 0.41
NPC1-205ENST00000587163 ZMYM5Q9UJ78 669 aa17.61■□□□□ 0.41
NPC1-205ENST00000587163 ANGPTL2Q9UKU9 493 aa17.61■□□□□ 0.41
NPC1-205ENST00000587163 AGO2Q9UKV8 859 aaKnown RBP17.61■□□□□ 0.41
NPC1-205ENST00000587163 MAGED2Q9UNF1 606 aaPredicted RBP17.61■□□□□ 0.41
NPC1-205ENST00000587163 PCDHB5Q9Y5E4 795 aa17.61■□□□□ 0.41
NPC1-205ENST00000587163 CFAP47Q6ZTR5 3102 aa17.61■□□□□ 0.41
NPC1-205ENST00000587163 ZNF638Q14966 1978 aaKnown RBP17.6■□□□□ 0.41
NPC1-205ENST00000587163 SLC26A4O43511 780 aa17.6■□□□□ 0.41
NPC1-205ENST00000587163 ADSSP30520 456 aa17.6■□□□□ 0.41
NPC1-205ENST00000587163 WNT7BP56706 349 aa17.6■□□□□ 0.41
NPC1-205ENST00000587163 PLK5Q496M5 336 aa17.6■□□□□ 0.41
NPC1-205ENST00000587163 MON1AQ86VX9 555 aa17.6■□□□□ 0.41
NPC1-205ENST00000587163 EZH1Q92800 747 aaPredicted RBP17.6■□□□□ 0.41
NPC1-205ENST00000587163 HHIPQ96QV1 700 aa17.6■□□□□ 0.41
NPC1-205ENST00000587163 CYP2S1Q96SQ9 504 aa17.6■□□□□ 0.41
NPC1-205ENST00000587163 DUSP15Q9H1R2 295 aaPredicted RBP17.6■□□□□ 0.41
NPC1-205ENST00000587163 DCLK1O15075 740 aa17.59■□□□□ 0.41
NPC1-205ENST00000587163 TBCAO75347 108 aaKnown RBP17.59■□□□□ 0.41
NPC1-205ENST00000587163 PRPF40AO75400 957 aaKnown RBP17.59■□□□□ 0.41
NPC1-205ENST00000587163 TADA3O75528 432 aa17.59■□□□□ 0.41
NPC1-205ENST00000587163 AKAP3O75969 853 aa17.59■□□□□ 0.41
NPC1-205ENST00000587163 CYP2F1P24903 491 aa17.59■□□□□ 0.41
NPC1-205ENST00000587163 DDX6P26196 483 aaKnown RBP eCLIP17.59■□□□□ 0.41
NPC1-205ENST00000587163 GJA4P35212 333 aa17.59■□□□□ 0.41
NPC1-205ENST00000587163 MPLP40238 635 aa17.59■□□□□ 0.41
NPC1-205ENST00000587163 DDR2Q16832 855 aa17.59■□□□□ 0.41
NPC1-205ENST00000587163 SV2CQ496J9 727 aa17.59■□□□□ 0.41
NPC1-205ENST00000587163 SLFN12LQ6IEE8 588 aa17.59■□□□□ 0.41
NPC1-205ENST00000587163 TCEAL6Q6IPX3 200 aa17.59■□□□□ 0.41
NPC1-205ENST00000587163 CC2D1AQ6P1N0 951 aaPredicted RBP17.59■□□□□ 0.41
NPC1-205ENST00000587163 CAMKK1Q8N5S9 505 aa17.59■□□□□ 0.41
NPC1-205ENST00000587163 ZSWIM2Q8NEG5 633 aa17.59■□□□□ 0.41
NPC1-205ENST00000587163 MRPS31Q92665 395 aaKnown RBP17.59■□□□□ 0.41
NPC1-205ENST00000587163 TCEAL3Q969E4 200 aa17.59■□□□□ 0.41
NPC1-205ENST00000587163 SLC22A12Q96S37 553 aa17.59■□□□□ 0.41
NPC1-205ENST00000587163 P2RY13Q9BPV8 354 aa17.59■□□□□ 0.41
NPC1-205ENST00000587163 ST6GALNAC4Q9H4F1 302 aa17.59■□□□□ 0.41
NPC1-205ENST00000587163 KIF9Q9HAQ2 790 aa17.59■□□□□ 0.41
NPC1-205ENST00000587163 KIF3AQ9Y496 699 aa17.59■□□□□ 0.41
NPC1-205ENST00000587163 PCDHGA5Q9Y5G8 931 aa17.59■□□□□ 0.41
NPC1-205ENST00000587163 CHD6Q8TD26 2715 aa17.59■□□□□ 0.41
NPC1-205ENST00000587163 LAMA1P25391 3075 aa17.58■□□□□ 0.4
NPC1-205ENST00000587163 SOBPA7XYQ1 873 aa17.58■□□□□ 0.4
NPC1-205ENST00000587163 H3BQV1 296 aa17.58■□□□□ 0.4
NPC1-205ENST00000587163 CSH1P0DML2 217 aa17.58■□□□□ 0.4
NPC1-205ENST00000587163 CSH2P0DML3 217 aa17.58■□□□□ 0.4
NPC1-205ENST00000587163 DRD1P21728 446 aa17.58■□□□□ 0.4
NPC1-205ENST00000587163 ACAT1P24752 427 aaKnown RBP17.58■□□□□ 0.4
NPC1-205ENST00000587163 GJB2P29033 226 aa17.58■□□□□ 0.4
NPC1-205ENST00000587163 POU5F1Q01860 360 aaKnown RBP17.58■□□□□ 0.4
NPC1-205ENST00000587163 CCDC142Q17RM4 750 aa17.58■□□□□ 0.4
NPC1-205ENST00000587163 ZNF720Q7Z2F6 126 aa17.58■□□□□ 0.4
NPC1-205ENST00000587163 PDCL2Q8N4E4 241 aa17.58■□□□□ 0.4
NPC1-205ENST00000587163 RPLP0P6Q8NHW5 317 aa17.58■□□□□ 0.4
NPC1-205ENST00000587163 POMGNT1Q8WZA1 660 aa17.58■□□□□ 0.4
NPC1-205ENST00000587163 FAM84AQ96KN4 292 aa17.58■□□□□ 0.4
NPC1-205ENST00000587163 LSM14BQ9BX40 385 aaKnown RBP17.58■□□□□ 0.4
NPC1-205ENST00000587163 ECT2Q9H8V3 914 aa17.58■□□□□ 0.4
NPC1-205ENST00000587163 KCNK5O95279 499 aa17.57■□□□□ 0.4
NPC1-205ENST00000587163 ABCD1P33897 745 aa17.57■□□□□ 0.4
NPC1-205ENST00000587163 DDIT3P35638 169 aa17.57■□□□□ 0.4
NPC1-205ENST00000587163 SHC2P98077 582 aa17.57■□□□□ 0.4
NPC1-205ENST00000587163 AMPD2Q01433 879 aa17.57■□□□□ 0.4
NPC1-205ENST00000587163 TSPY1Q01534 308 aa17.57■□□□□ 0.4
NPC1-205ENST00000587163 KCNA1Q09470 495 aa17.57■□□□□ 0.4
NPC1-205ENST00000587163 ZNF268Q14587 947 aaPredicted RBP17.57■□□□□ 0.4
NPC1-205ENST00000587163 MTF1Q14872 753 aa17.57■□□□□ 0.4
NPC1-205ENST00000587163 PDGFRLQ15198 375 aa17.57■□□□□ 0.4
NPC1-205ENST00000587163 SFR1Q86XK3 245 aa17.57■□□□□ 0.4
NPC1-205ENST00000587163 TTC16Q8NEE8 873 aa17.57■□□□□ 0.4
NPC1-205ENST00000587163 LARP4BQ92615 738 aaKnown RBP17.57■□□□□ 0.4
NPC1-205ENST00000587163 TMX3Q96JJ7 454 aa17.57■□□□□ 0.4
NPC1-205ENST00000587163 PKMYT1Q99640 499 aa17.57■□□□□ 0.4
NPC1-205ENST00000587163 STRA6Q9BX79 667 aa17.57■□□□□ 0.4
NPC1-205ENST00000587163 VPS45Q9NRW7 570 aa17.57■□□□□ 0.4
NPC1-205ENST00000587163 L1RE1Q9UN81 338 aa17.57■□□□□ 0.4
NPC1-205ENST00000587163 AGAP1Q9UPQ3 857 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms