RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 SPPL2BQ8TCT7 592 aa12.83□□□□□ -0.36
BRCA1-225ENST00000586385 C2orf15Q8WU43 125 aaKnown RBP12.83□□□□□ -0.36
BRCA1-225ENST00000586385 DDX1Q92499 740 aaKnown RBP12.83□□□□□ -0.36
BRCA1-225ENST00000586385 CDK5RAP3Q96JB5 506 aa12.83□□□□□ -0.36
BRCA1-225ENST00000586385 SLC22A12Q96S37 553 aa12.83□□□□□ -0.36
BRCA1-225ENST00000586385 LSM14BQ9BX40 385 aaKnown RBP12.83□□□□□ -0.36
BRCA1-225ENST00000586385 TDP1Q9NUW8 608 aa12.83□□□□□ -0.36
BRCA1-225ENST00000586385 RALYQ9UKM9 306 aaKnown RBP12.83□□□□□ -0.36
BRCA1-225ENST00000586385 ANGPTL2Q9UKU9 493 aa12.83□□□□□ -0.36
BRCA1-225ENST00000586385 DSEQ9UL01 958 aa12.83□□□□□ -0.36
BRCA1-225ENST00000586385 HCRTO43612 131 aa12.82□□□□□ -0.36
BRCA1-225ENST00000586385 PPP1R37O75864 691 aa12.82□□□□□ -0.36
BRCA1-225ENST00000586385 AKAP3O75969 853 aa12.82□□□□□ -0.36
BRCA1-225ENST00000586385 GJA4P35212 333 aa12.82□□□□□ -0.36
BRCA1-225ENST00000586385 KARSQ15046 597 aaKnown RBP12.82□□□□□ -0.36
BRCA1-225ENST00000586385 PDCL2Q8N4E4 241 aa12.82□□□□□ -0.36
BRCA1-225ENST00000586385 RAD54LQ92698 747 aa12.82□□□□□ -0.36
BRCA1-225ENST00000586385 CHAMP1Q96JM3 812 aa12.82□□□□□ -0.36
BRCA1-225ENST00000586385 GCNAQ96QF7 691 aa12.82□□□□□ -0.36
BRCA1-225ENST00000586385 PI4K2AQ9BTU6 479 aa12.82□□□□□ -0.36
BRCA1-225ENST00000586385 STRA6Q9BX79 667 aa12.82□□□□□ -0.36
BRCA1-225ENST00000586385 ST6GALNAC4Q9H4F1 302 aa12.82□□□□□ -0.36
BRCA1-225ENST00000586385 PPP4R2Q9NY27 417 aa12.82□□□□□ -0.36
BRCA1-225ENST00000586385 L1RE1Q9UN81 338 aa12.82□□□□□ -0.36
BRCA1-225ENST00000586385 SLC8A2Q9UPR5 921 aa12.82□□□□□ -0.36
BRCA1-225ENST00000586385 PCDHGA5Q9Y5G8 931 aa12.82□□□□□ -0.36
BRCA1-225ENST00000586385 ANK1P16157 1881 aa12.82□□□□□ -0.36
BRCA1-225ENST00000586385 GREB1Q4ZG55 1949 aa12.82□□□□□ -0.36
BRCA1-225ENST00000586385 FRYQ5TBA9 3013 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 KPNA7A9QM74 516 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 SLC26A4O43511 780 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 KCNK5O95279 499 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 CD2BP2O95400 341 aaKnown RBP12.81□□□□□ -0.36
BRCA1-225ENST00000586385 CCDC192P0DO97 292 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 CHRM1P11229 460 aaPredicted RBP12.81□□□□□ -0.36
BRCA1-225ENST00000586385 SCP2P22307 547 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 CYP2F1P24903 491 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 DDX6P26196 483 aaKnown RBP eCLIP12.81□□□□□ -0.36
BRCA1-225ENST00000586385 AVPR1AP37288 418 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 KCNA1Q09470 495 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 SMARCB1Q12824 385 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 USP4Q13107 963 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 ZNF268Q14587 947 aaPredicted RBP12.81□□□□□ -0.36
BRCA1-225ENST00000586385 ZNF77Q15935 545 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 DDR2Q16832 855 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 ADALQ6DHV7 355 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 USP49Q70CQ1 688 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 OSTM1Q86WC4 334 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 METTL23Q86XA0 190 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 THEM5Q8N1Q8 247 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 CAMKK1Q8N5S9 505 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 C12orf50Q8NA57 414 aaPredicted RBP12.81□□□□□ -0.36
BRCA1-225ENST00000586385 AK8Q96MA6 479 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 CYP2S1Q96SQ9 504 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 P2RY13Q9BPV8 354 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 ECT2Q9H8V3 914 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 KIF9Q9HAQ2 790 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 ZMYM5Q9UJ78 669 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 AGO2Q9UKV8 859 aaKnown RBP12.81□□□□□ -0.36
BRCA1-225ENST00000586385 PCDHB5Q9Y5E4 795 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 CEP295Q9C0D2 2601 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 MYH11P35749 1972 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 RALGAPA1Q6GYQ0 2036 aa12.81□□□□□ -0.36
BRCA1-225ENST00000586385 EML5Q05BV3 1969 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 SOBPA7XYQ1 873 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 GIPC1O14908 333 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 ATG13O75143 517 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 PRPF40AO75400 957 aaKnown RBP12.8□□□□□ -0.36
BRCA1-225ENST00000586385 NOL4O94818 638 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 DRD1P21728 446 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 ACAT1P24752 427 aaKnown RBP12.8□□□□□ -0.36
BRCA1-225ENST00000586385 ZXDBP98169 803 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 POU5F1Q01860 360 aaKnown RBP12.8□□□□□ -0.36
BRCA1-225ENST00000586385 BFSP1Q12934 665 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 MTF1Q14872 753 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 PDGFRLQ15198 375 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 PTPAQ15257 358 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 GAB4Q2WGN9 574 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 SYT13Q7L8C5 426 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 ZNF720Q7Z2F6 126 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 SFR1Q86XK3 245 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 DCP1BQ8IZD4 617 aaKnown RBP12.8□□□□□ -0.36
BRCA1-225ENST00000586385 C1orf127Q8N9H9 656 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 RPLP0P6Q8NHW5 317 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 LEO1Q8WVC0 666 aaPredicted RBP12.8□□□□□ -0.36
BRCA1-225ENST00000586385 MYRFLQ96LU7 910 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 ZHX3Q9H4I2 956 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 VPS45Q9NRW7 570 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 GCNT4Q9P109 453 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 MAGED2Q9UNF1 606 aaPredicted RBP12.8□□□□□ -0.36
BRCA1-225ENST00000586385 WASF3Q9UPY6 502 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 WNT6Q9Y6F9 365 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 SPAG17Q6Q759 2223 aa12.8□□□□□ -0.36
BRCA1-225ENST00000586385 BCLAF3A2AJT9 711 aaKnown RBP12.79□□□□□ -0.36
BRCA1-225ENST00000586385 C2orf78A6NCI8 922 aa12.79□□□□□ -0.36
BRCA1-225ENST00000586385 CSH1P0DML2 217 aa12.79□□□□□ -0.36
BRCA1-225ENST00000586385 CSH2P0DML3 217 aa12.79□□□□□ -0.36
BRCA1-225ENST00000586385 GJB2P29033 226 aa12.79□□□□□ -0.36
BRCA1-225ENST00000586385 POLR2BP30876 1174 aaKnown RBP12.79□□□□□ -0.36
BRCA1-225ENST00000586385 UBA7P41226 1012 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms