RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 COBLL1Q53SF7 1204 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 XKR4Q5GH76 650 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 CLLU1OSQ5K130 101 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 FAM26FQ5R3K3 315 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 ATF7IP2Q5U623 682 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 CEP135Q66GS9 1140 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 TWF2Q6IBS0 349 aaKnown RBP6.15□□□□□ -1.42
CDH8-213ENST00000584966 NOTUMQ6P988 496 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 SLC27A1Q6PCB7 646 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 CRELD2Q6UXH1 353 aaPredicted RBP6.15□□□□□ -1.42
CDH8-213ENST00000584966 ALKAL1Q6UXT8 129 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 RBM43Q6ZSC3 357 aaKnown RBP6.15□□□□□ -1.42
CDH8-213ENST00000584966 DPH6Q7L8W6 267 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 SPRED2Q7Z698 418 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 TMEM192Q8IY95 271 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 CEP120Q8N960 986 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 KLHL23Q8NBE8 558 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 SLC17A8Q8NDX2 589 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 FLCNQ8NFG4 579 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 TMEM174Q8WUU8 243 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 LPPQ93052 612 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 HVCN1Q96D96 273 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 CCDC51Q96ER9 411 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 CASD1Q96PB1 797 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 GSDMAQ96QA5 445 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 SLC9A7Q96T83 725 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 TCF12Q99081 682 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 RSRP1Q9BUV0 290 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 MRPL4Q9BYD3 311 aaKnown RBP6.15□□□□□ -1.42
CDH8-213ENST00000584966 PBX4Q9BYU1 374 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 CDT1Q9H211 546 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 KCTD10Q9H3F6 313 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 CLSTN2Q9H4D0 955 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 ABCB6Q9NP58 842 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 TMEM161AQ9NX61 479 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 SNTG2Q9NY99 539 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 MAN1B1Q9UKM7 699 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 PPM1HQ9ULR3 514 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 HIF3AQ9Y2N7 669 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 GDAQ9Y2T3 454 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 YBX2Q9Y2T7 364 aaKnown RBP6.15□□□□□ -1.42
CDH8-213ENST00000584966 HES2Q9Y543 173 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 IPPQ9Y573 584 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 PCDHB2Q9Y5E7 798 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 A0A0B4J269 797 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 H0YCG3 227 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 N4BP3O15049 544 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 B4GALT3O60512 393 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 KINO60870 393 aaKnown RBP6.14□□□□□ -1.43
CDH8-213ENST00000584966 TOM1L1O75674 476 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 ERLIN2O94905 339 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 GCNT3O95395 438 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 PAPLNO95428 1278 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 FGFR1P11362 822 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 AKAP5P24588 427 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 MAP4P27816 1152 aaKnown RBP6.14□□□□□ -1.43
CDH8-213ENST00000584966 KCNJ6P48051 423 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 SMAD3P84022 425 aaKnown RBP6.14□□□□□ -1.43
CDH8-213ENST00000584966 NAB2Q15742 525 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 CAMK4Q16566 473 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 SLC10A6Q3KNW5 377 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 SEZ6Q53EL9 994 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 ZBTB41Q5SVQ8 909 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 ANKRD34AQ69YU3 496 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 FAM117BQ6P1L5 589 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 MPZL3Q6UWV2 235 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 SMYD4Q8IYR2 804 aaPredicted RBP6.14□□□□□ -1.43
CDH8-213ENST00000584966 MYOCDQ8IZQ8 938 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 SHISA5Q8N114 240 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 KLHDC7BQ96G42 594 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 ACCSQ96QU6 501 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 MED15Q96RN5 788 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 RAD9AQ99638 391 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 NXF3Q9H4D5 531 aaKnown RBP6.14□□□□□ -1.43
CDH8-213ENST00000584966 CWH43Q9H720 699 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 DMAC2Q9NW81 257 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 PCDHB7Q9Y5E2 793 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 PCDHA11Q9Y5I1 949 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 UBE4BO95155 1302 aa6.14□□□□□ -1.43
CDH8-213ENST00000584966 PRRC2BQ5JSZ5 2229 aaKnown RBP6.14□□□□□ -1.43
CDH8-213ENST00000584966 TSC2P49815 1807 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 PLXNA3P51805 1871 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 DOCK6Q96HP0 2047 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 TMEM238LA0A1B0GVL6 79 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 LINC01553A4QN01 128 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 ARL5CA6NH57 179 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 PTGESO14684 152 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 CLDN3O15551 220 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 DDHD2O94830 711 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 MCF2P10911 925 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 GARTP22102 1010 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 IGFBP6P24592 240 aaPredicted RBP6.13□□□□□ -1.43
CDH8-213ENST00000584966 ABCD1P33897 745 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 GTF2F1P35269 517 aaKnown RBP eCLIP6.13□□□□□ -1.43
CDH8-213ENST00000584966 TNFSF9P41273 254 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 PRCPP42785 496 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 RAB27AP51159 221 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 PMS1P54277 932 aaKnown RBP6.13□□□□□ -1.43
CDH8-213ENST00000584966 TAP1Q03518 808 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 NCBP1Q09161 790 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms